Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5386
         (642 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.1  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   1.9  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 274 NKMMFNENKLITSDS 318
           N + FNENKL TSD+
Sbjct: 548 NSINFNENKLHTSDT 562


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 274 NKMMFNENKLITSDS 318
           N + FNENKL TSD+
Sbjct: 548 NSINFNENKLHTSDT 562


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 305 LHQTRTYKYNLTHCCHVLMY 364
           +H    YKYN  + C  L Y
Sbjct: 90  IHNNNNYKYNYNNNCKKLYY 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,821
Number of Sequences: 438
Number of extensions: 3581
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)