Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5384
         (747 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical prote...    24   5.7  
AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosens...    24   5.7  

>AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical protein
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
 Frame = -2

Query: 551 LGNKVDTYYFNYYIHIDLYKFFSS----DSNQHKVENFQLNTISSYYLGENKIDLPWTEM 384
           LG   +  Y   Y +IDL + FSS    D+  + ++N    T     L +N  D   ++ 
Sbjct: 15  LGETANETYVTKYDNIDLEEIFSSKRLMDNYMNCLKNVGPCTPDGRELKDNLPDALMSDC 74

Query: 383 VKMYNTRRL--DVIAKYNV 333
           VK    +R+  D + K+ V
Sbjct: 75  VKCSEKQRIGSDKVIKFIV 93


>AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosensory
           protein CSP3 protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
 Frame = -2

Query: 551 LGNKVDTYYFNYYIHIDLYKFFSS----DSNQHKVENFQLNTISSYYLGENKIDLPWTEM 384
           LG   +  Y   Y +IDL + FSS    D+  + ++N    T     L +N  D   ++ 
Sbjct: 15  LGETANETYVTKYDNIDLEEIFSSKRLMDNYMNCLKNVGPCTPDGRELKDNLPDALMSDC 74

Query: 383 VKMYNTRRL--DVIAKYNV 333
           VK    +R+  D + K+ V
Sbjct: 75  VKCSEKQRIGSDKVIKFIV 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,912
Number of Sequences: 2352
Number of extensions: 15713
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)