Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5383
         (431 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00048-3|AAB53827.3|  315|Caenorhabditis elegans Nematode astaci...    28   3.3  
Z71186-1|CAA94913.1|  301|Caenorhabditis elegans Hypothetical pr...    27   4.4  

>U00048-3|AAB53827.3|  315|Caenorhabditis elegans Nematode astacin
           protease protein 4 protein.
          Length = 315

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 258 PGISTRHNNNELEILVNIASILQHPQV 178
           PG+S  +NNN     +N  SI+ HPQV
Sbjct: 290 PGVSGNNNNNNNN-QINSNSIVNHPQV 315


>Z71186-1|CAA94913.1|  301|Caenorhabditis elegans Hypothetical
           protein F23D12.1 protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 210 LPKFLVRCYCDELKCLVDTW 269
           +P F+ R  C  L CLVD W
Sbjct: 129 IPHFIFRIICLSLICLVDAW 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,864,211
Number of Sequences: 27780
Number of extensions: 194469
Number of successful extensions: 484
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)