Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5380
(350 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35600-4|CAB54236.1| 137|Caenorhabditis elegans Hypothetical pr... 168 8e-43
AF038604-4|AAO38680.1| 134|Caenorhabditis elegans Hypothetical ... 78 2e-15
AF038604-3|AAB92012.1| 161|Caenorhabditis elegans Hypothetical ... 78 2e-15
Z72515-1|CAA96681.1| 419|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 1.6
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 28 1.6
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 28 2.2
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 28 2.2
AF063007-2|AAC16433.1| 583|Caenorhabditis elegans Hypothetical ... 28 2.2
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 27 2.9
Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical p... 27 3.8
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 27 3.8
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 27 3.8
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z77663-17|CAB54256.5| 500|Caenorhabditis elegans Hypothetical p... 27 5.0
AL021346-4|CAB54259.5| 500|Caenorhabditis elegans Hypothetical ... 27 5.0
AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein ( Cae... 27 5.0
AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin ... 27 5.0
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 27 5.0
Z79752-6|CAB02080.2| 423|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical pr... 26 6.6
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 26 6.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 26 6.6
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 26 6.6
Z75955-12|CAB00115.2| 485|Caenorhabditis elegans Hypothetical p... 26 8.7
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z46242-12|CAA86332.1| 690|Caenorhabditis elegans Hypothetical p... 26 8.7
Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical p... 26 8.7
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 26 8.7
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 26 8.7
AF256467-1|AAF71546.1| 690|Caenorhabditis elegans SEL-5B serine... 26 8.7
AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A serine... 26 8.7
>Z35600-4|CAB54236.1| 137|Caenorhabditis elegans Hypothetical
protein F37A8.5 protein.
Length = 137
Score = 168 bits (409), Expect = 8e-43
Identities = 76/96 (79%), Positives = 84/96 (87%)
Frame = +3
Query: 60 TFQAYLPPAHRTYSCIHCRAHLASHDELISKSFQGSRGRAYLFNSVVNVGCGMAEERVLL 239
TFQ YLP R YSCIHCRA+LA+H ELISKSFQGS+G+AYLFN+VVNVGCG AEERVLL
Sbjct: 22 TFQHYLPAGDRCYSCIHCRANLAAHAELISKSFQGSQGKAYLFNAVVNVGCGPAEERVLL 81
Query: 240 TGLHAVADIYCECCKTMLGWKYEHALESSQEIQGGQ 347
TGLHAVADIYCE CKT LGWKYEHA ESSQ+ + G+
Sbjct: 82 TGLHAVADIYCEICKTTLGWKYEHAFESSQKYKEGK 117
>AF038604-4|AAO38680.1| 134|Caenorhabditis elegans Hypothetical
protein B0546.4b protein.
Length = 134
Score = 78.2 bits (184), Expect = 2e-15
Identities = 37/85 (43%), Positives = 45/85 (52%)
Frame = +3
Query: 96 YSCIHCRAHLASHDELISKSFQGSRGRAYLFNSVVNVGCGMAEERVLLTGLHAVADIYCE 275
Y C+ C +L EL SK+F GS G A LF NV G E R + TG H V D++C
Sbjct: 16 YGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRCEHRKMTTGWHTVRDVFCV 75
Query: 276 CCKTMLGWKYEHALESSQEIQGGQV 350
C LGW YE A+ SQ + QV
Sbjct: 76 TCNQKLGWMYEMAVSESQTYKETQV 100
>AF038604-3|AAB92012.1| 161|Caenorhabditis elegans Hypothetical
protein B0546.4a protein.
Length = 161
Score = 78.2 bits (184), Expect = 2e-15
Identities = 37/85 (43%), Positives = 45/85 (52%)
Frame = +3
Query: 96 YSCIHCRAHLASHDELISKSFQGSRGRAYLFNSVVNVGCGMAEERVLLTGLHAVADIYCE 275
Y C+ C +L EL SK+F GS G A LF NV G E R + TG H V D++C
Sbjct: 16 YGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRCEHRKMTTGWHTVRDVFCV 75
Query: 276 CCKTMLGWKYEHALESSQEIQGGQV 350
C LGW YE A+ SQ + QV
Sbjct: 76 TCNQKLGWMYEMAVSESQTYKETQV 100
>Z72515-1|CAA96681.1| 419|Caenorhabditis elegans Hypothetical
protein T11A5.1 protein.
Length = 419
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 GEKRRRNPGRQDPRQERSKPTYRRRTA-PTAAYIAARTSPAMTNS 144
G+KR+ +P R E S P+ + RTA PTAA A R + A++ +
Sbjct: 2 GKKRKPSPERSSDEDEVSTPSPKDRTARPTAA--ARRENVALSQA 44
>Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical
protein ZK643.5 protein.
Length = 487
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 1 NSARGEKRRRNPGRQDPRQERSKPTYRR 84
+S+R ++RRR+ R+ PR++R + YRR
Sbjct: 271 SSSRSDRRRRDD-RKRPREDRDRKDYRR 297
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 19 KRRRNPGR-QDPRQERSKPTYRRRTAPTAAYIAARTSPAMTNSSRSRFKA 165
+RRR+P + + P +R P RRR +P+A+ SP ++SR K+
Sbjct: 389 RRRRSPSKSRSPAPKREIPPARRRRSPSAS-----KSPPAPKRAKSRSKS 433
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 1 NSARGEKRRRNPGRQDPRQERSKPTYRRRTAPTA 102
N R RR +P R PR++ + RRR +P A
Sbjct: 211 NRRRSPPRRGSPRRGSPRRDTRRSPPRRRGSPPA 244
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 291 ALSCNTRSICRRPRGGPSARRVPPPYRIRRS 199
+++ +S R R PSA + PPP R RRS
Sbjct: 292 SVAARAKSGSPRRRRSPSASKSPPPARRRRS 322
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 4 SARGEKRRRNPGRQDPRQERSKPTYRRRTAPTAAYIAARTSPAMTNSSRSRFKAV 168
+AR +KR+ P Q +Q+ S+P+ R++AP A A A N + A+
Sbjct: 889 AARKQKRKSEPVEQ--KQKSSQPSTSRKSAPMALQQPAEPRVAQLNDYSKQASAL 941
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 334 ISWLDSKACSYFHPSIVLQHSQYMSATAWRPVSKTRSSAIPHP 206
+SW+D C +I + S + W+P SKTR P
Sbjct: 99 LSWVDPYKCGAHKAAIEIGLSTQRAYEKWQPKSKTRYKICTDP 141
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 334 ISWLDSKACSYFHPSIVLQHSQYMSATAWRPVSKTRSSAIPHP 206
+SW+D C +I + S + W+P SKTR P
Sbjct: 99 LSWVDPYKCGAHKAAIEIGLSTQRAYEKWQPKSKTRYKICTDP 141
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 334 ISWLDSKACSYFHPSIVLQHSQYMSATAWRPVSKTRSSAIPHP 206
+SW+D C +I + S + W+P SKTR P
Sbjct: 99 LSWVDPYKCGAHKAAIEIGLSTQRAYEKWQPKSKTRYKICTDP 141
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 334 ISWLDSKACSYFHPSIVLQHSQYMSATAWRPVSKTRSSAIPHP 206
+SW+D C +I + S + W+P SKTR P
Sbjct: 99 LSWVDPYKCGAHKAAIEIGLSTQRAYEKWQPKSKTRYKICTDP 141
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 334 ISWLDSKACSYFHPSIVLQHSQYMSATAWRPVSKTRSSAIPHP 206
+SW+D C +I + S + W+P SKTR P
Sbjct: 123 LSWVDPYKCGAHKAAIEIGLSTQRAYEKWQPKSKTRYKICTDP 165
>AF063007-2|AAC16433.1| 583|Caenorhabditis elegans Hypothetical
protein R119.7 protein.
Length = 583
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 19 KRRRNPGRQDPRQERSKPTYRRRTAPTAAYIAARTSPAMTNSSRSRFKAVGG 174
K + N G RQE S P YR + ++Y+ +P +S F GG
Sbjct: 100 KHQGNSGNSSYRQEHSFPEYRNQNPQASSYLP--PNPRGHRNSTGCFNGGGG 149
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +1
Query: 22 RRRNPGRQDPRQER---SKPTYRRRTAPTAAYIAARTSPA 132
RRR P PR++R S RRR +P + A SPA
Sbjct: 93 RRRRPSPSPPRRDRRDRSGSRQRRRASPRRSPAARSASPA 132
>Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical
protein F53F4.11 protein.
Length = 543
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 20 SGGGTPAVKTPVKNVPSLPTAGAPHLQLHTLP-RAPRQP 133
+GG TPA KTP PS T P RA + P
Sbjct: 46 AGGATPAPKTPAPKTPSRTTKSTVDTPAPKTPTRAAKTP 84
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 27.1 bits (57), Expect = 3.8
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -3
Query: 234 RRVPPPYRIRRSQLN*TDTRAPDCLETTSR*VRHGWRGARG---NVCSCRCGAPA 79
RR PP R+RR R+P E S R+G R A N CSCR APA
Sbjct: 67 RRSPP--RVRREP----PMRSPGRNEVMSPERRYGTRSASSRSQNECSCRNRAPA 115
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 335 YFLARFQGVLIFPPEHCLATLAVYV-GDRVEARQQDAFLRHTASDVHN*IKQIRAPP 168
Y F V +F L + YV G + + Q +F +H+A D+ + + IRA P
Sbjct: 15 YSAVTFSVVAVFSLCITLPMVYNYVHGIKSQINHQISFCKHSARDIFSEVNHIRASP 71
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical protein
T01G1.1c protein.
Length = 1580
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 37 GRQDPRQERSKPTYRRRTAPTAAYIAARTSPAMTNSSRSRFKA-VGG 174
G D R+E+ K T+P + A TS + + S +RF++ VGG
Sbjct: 1101 GDSDERKEKKKRIAFVSTSPASTSFANSTSQSPSFSRNTRFRSTVGG 1147
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical protein
T01G1.1a protein.
Length = 1605
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 37 GRQDPRQERSKPTYRRRTAPTAAYIAARTSPAMTNSSRSRFKA-VGG 174
G D R+E+ K T+P + A TS + + S +RF++ VGG
Sbjct: 1101 GDSDERKEKKKRIAFVSTSPASTSFANSTSQSPSFSRNTRFRSTVGG 1147
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical protein
T01G1.1c protein.
Length = 1580
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 37 GRQDPRQERSKPTYRRRTAPTAAYIAARTSPAMTNSSRSRFKA-VGG 174
G D R+E+ K T+P + A TS + + S +RF++ VGG
Sbjct: 1101 GDSDERKEKKKRIAFVSTSPASTSFANSTSQSPSFSRNTRFRSTVGG 1147
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical protein
T01G1.1a protein.
Length = 1605
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 37 GRQDPRQERSKPTYRRRTAPTAAYIAARTSPAMTNSSRSRFKA-VGG 174
G D R+E+ K T+P + A TS + + S +RF++ VGG
Sbjct: 1101 GDSDERKEKKKRIAFVSTSPASTSFANSTSQSPSFSRNTRFRSTVGG 1147
>Z77663-17|CAB54256.5| 500|Caenorhabditis elegans Hypothetical
protein F53F4.14 protein.
Length = 500
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 28 RNPG-RQDPRQERSKPTYRRRTAPTAAYIAARTSPAMTNSSRS 153
R+P R +PRQ+RS P + RT R S ++ S RS
Sbjct: 28 RSPSLRSEPRQQRSHPYLQTRTNTHRQRPMIRPSSVVSMSGRS 70
>AL021346-4|CAB54259.5| 500|Caenorhabditis elegans Hypothetical
protein F53F4.14 protein.
Length = 500
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 28 RNPG-RQDPRQERSKPTYRRRTAPTAAYIAARTSPAMTNSSRS 153
R+P R +PRQ+RS P + RT R S ++ S RS
Sbjct: 28 RSPSLRSEPRQQRSHPYLQTRTNTHRQRPMIRPSSVVSMSGRS 70
>AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein (
Caenorhabditis elegansmRNA for dystrobrevin. ).
Length = 590
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -2
Query: 346 CPPCISWLD-----SKACSYFHPSIVLQHSQYMSATAWR 245
CPPCI WL + + +HP +V Q S T +R
Sbjct: 239 CPPCIMWLPLLHRMASVSNVYHP-VVCDACQVRSFTGFR 276
>AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin
homolog protein 1 protein.
Length = 590
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -2
Query: 346 CPPCISWLD-----SKACSYFHPSIVLQHSQYMSATAWR 245
CPPCI WL + + +HP +V Q S T +R
Sbjct: 239 CPPCIMWLPLLHRMASVSNVYHP-VVCDACQVRSFTGFR 276
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 37 GRQDPRQERSKPTYRRRTAPTAAYIAARTSPAMTNSSRSRFKA-VGG 174
G D R+E+ K T+P + A TS + + S +RF++ VGG
Sbjct: 1105 GDSDERKEKKKRIAFVSTSPASTSFANSTSQSPSFSRNTRFRSTVGG 1151
>Z79752-6|CAB02080.2| 423|Caenorhabditis elegans Hypothetical
protein D2005.6 protein.
Length = 423
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 34 PGRQDPRQERSKPTYRRRTAPTAAYIAART 123
P PR+ R+ P+ R TAPT + A +
Sbjct: 129 PAPSPPRRSRTAPSRPRSTAPTMGTLGAES 158
>Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical
protein F14D7.2 protein.
Length = 457
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 32 TPAVKTPVKNVPSLPTAGAPH-LQLHTLPRAPRQP*RT 142
+P +TPV PSLP AG L + + R P RT
Sbjct: 141 SPTPRTPVNQGPSLPYAGGREALGIPFMDRTPSDTERT 178
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 1 NSARGEKRRRNPGRQDPRQERSKPTYRRRTAPTAAYIAARTSPAMTNSSRSRFKAVGGAR 180
N +R R R ++ ++ RS+ RRR + T + +R RSR K+ +R
Sbjct: 1511 NRSRSRDRARRSRSREHKRARSRSAERRRRSRTRSRSRSRERYRSRRDRRSRTKSRSRSR 1570
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +2
Query: 29 GTPAVKTPVKNVPS---LPTAGAPHLQLHTLPRAPRQP 133
GT AV +N+P LP+ P+ TLP AP P
Sbjct: 342 GTVAVPPKEENLPPIEPLPSVAGPYQPPRTLPVAPGDP 379
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 1 NSARGEKRRRNPGRQDPRQERSKPTYRRRTAPTAAYIAARTSPAMTNSSRSRFKAVGGAR 180
N +R R R ++ ++ RS+ RRR + T + +R RSR K+ +R
Sbjct: 136 NRSRSRDRARRSRSREHKRARSRSAERRRRSRTRSRSRSRERYRSRRDRRSRTKSRSRSR 195
>Z75955-12|CAB00115.2| 485|Caenorhabditis elegans Hypothetical
protein R07B7.6 protein.
Length = 485
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 216 MAEERVLLTGLHAVADIYCECCKTMLGWKYEHAL 317
+ +E L +G H + +C KT+L K++HA+
Sbjct: 211 LGKEYSLNSGGHGQDPAHFDCLKTILDRKWDHAI 244
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 14 ARSGGGTPAVKTPVKNVPSLPTAGAPHLQLHTLPRAPRQP*RTHLEVVSRQSGARVSV*F 193
A + TPAV P VP PT AP ++ +P P P ++ E V+ A +S+
Sbjct: 531 ASTTSATPAVTAPASIVPVTPT--APIVETLIVP--PLPPVESNPEEVTPMVTAPISIHS 586
Query: 194 SCE 202
S E
Sbjct: 587 SFE 589
>Z46242-12|CAA86332.1| 690|Caenorhabditis elegans Hypothetical
protein F35G12.3b protein.
Length = 690
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = +2
Query: 35 PAVKTPVKNVPSL---PTAGAPHLQL 103
P T V NVPS+ P G PHL+L
Sbjct: 407 PKATTVVPNVPSISPVPPVGLPHLRL 432
>Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical
protein F35G12.3a protein.
Length = 1077
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = +2
Query: 35 PAVKTPVKNVPSL---PTAGAPHLQL 103
P T V NVPS+ P G PHL+L
Sbjct: 407 PKATTVVPNVPSISPVPPVGLPHLRL 432
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 1 NSARGEKRRRNPGRQDPRQERSKPTYR-RRTAPTAAYIAARTSPAMTNSS 147
N +G+K + N R++ R+++SK + TAP A T P +N+S
Sbjct: 1040 NEGKGQKIK-NMLRRNSRRDKSKSKLKIESTAPAAVNPRGWTQPTPSNTS 1088
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical protein
C04D8.1 protein.
Length = 1317
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 1 NSARGEKRRRNPGRQDPRQERSKPTYR-RRTAPTAAYIAARTSPAMTNSS 147
N +G+K + N R++ R+++SK + TAP A T P +N+S
Sbjct: 918 NEGKGQKIK-NMLRRNSRRDKSKSKLKIESTAPAAVNPRGWTQPTPSNTS 966
>AF256467-1|AAF71546.1| 690|Caenorhabditis elegans SEL-5B
serine/threonine kinase protein.
Length = 690
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = +2
Query: 35 PAVKTPVKNVPSL---PTAGAPHLQL 103
P T V NVPS+ P G PHL+L
Sbjct: 407 PKATTVVPNVPSISPVPPVGLPHLRL 432
>AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A
serine/threonine kinase protein.
Length = 1077
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = +2
Query: 35 PAVKTPVKNVPSL---PTAGAPHLQL 103
P T V NVPS+ P G PHL+L
Sbjct: 407 PKATTVVPNVPSISPVPPVGLPHLRL 432
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,797,520
Number of Sequences: 27780
Number of extensions: 181495
Number of successful extensions: 755
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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