Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5378
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.26 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.0  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    24   1.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    24   1.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   3.2  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   3.2  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   3.2  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   3.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   5.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   5.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   5.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   5.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   9.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 243 YVPPLKYYTEAFERDKVYTLDFCFYS*YLALILMFYSVYSF 365
           ++P + Y+  AF    ++T+   FY   + L+ ++Y  Y+F
Sbjct: 208 FLPCIYYFYSAFI---IFTIHLLFYCVLIILLCIYYFYYAF 245


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +2

Query: 56  FNISRKCNVVKLKLIDIFAVN*FLCALVTLLTTKIL*N 169
           +N ++KC  +++ LID+  V   L  +  +L   +  N
Sbjct: 49  YNFTKKCYFLRMVLIDLLIVGCILKHIFNILMKNVTLN 86


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 240 KYVPPLKYYTEAFERD 287
           +Y+PP+ YY    +RD
Sbjct: 346 EYIPPILYYNYTVDRD 361


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 240 KYVPPLKYYTEAFERD 287
           +Y+PP+ YY    +RD
Sbjct: 346 EYIPPILYYNYTVDRD 361


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/43 (20%), Positives = 21/43 (48%)
 Frame = +2

Query: 122 FLCALVTLLTTKIL*NGANQINFSYTHHSLGKRNNKTRKKICS 250
           ++C+   L+  KI     + I+ ++ +  + K +     KIC+
Sbjct: 179 YICSYTVLIRNKISNLNTSLIHSTHLNGDIVKEHQNLHNKICN 221


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 240 KYVPPLKYYTEAFERD 287
           KY+P + YY    +RD
Sbjct: 346 KYIPAILYYNYTVDRD 361


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 240 KYVPPLKYYTEAFERD 287
           KY+P + YY    +RD
Sbjct: 346 KYIPAILYYNYTVDRD 361


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 240 KYVPPLKYYTEAFERD 287
           KY+P + YY    +RD
Sbjct: 346 KYIPAILYYNYTVDRD 361


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 245 IFFFEFYYYASLRSDVYS 192
           + F+ FY Y +++  +YS
Sbjct: 15  LLFYLFYCYKTIKQHIYS 32


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 50  DVFNISRKCNVVKLKLIDIFAVN*FLCAL 136
           D F I +  N++ L L  ++ V  ++CA+
Sbjct: 344 DSFMIYKTTNIIILGLNVVYVVTAWICAI 372


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 50  DVFNISRKCNVVKLKLIDIFAVN*FLCAL 136
           D F I +  N++ L L  ++ V  ++CA+
Sbjct: 69  DSFMIYKTTNIIILGLNVVYVVTAWICAI 97


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 245 IFFFEFYYYASLRSDVYS 192
           + F+ FY Y +++  +YS
Sbjct: 15  LLFYLFYCYKTIKQHIYS 32


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 11/55 (20%), Positives = 26/55 (47%)
 Frame = -2

Query: 387 HVETSIFKNYIHCRTLK*ELSINCRNKNPECKLYRVRTLQCNILVEEHIFFRVLL 223
           HVE+ I + ++H    + + +I+   ++ +     ++  +       H F RVL+
Sbjct: 90  HVESPIDEKFVHPHRFRLKFNISSIPRHEKLTAAEIKLTRETAKNTSHPFQRVLV 144


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +3

Query: 291 VYTLDFCFYS*YLALILMFYSVYSF*KSKFQRASEGIIIYFSNTTFTV 434
           ++ L F F+   L  +     +  F  SK    S  +I++F+ T  TV
Sbjct: 132 MWCLIFAFWVPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTV 179


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +3

Query: 291 VYTLDFCFYS*YLALILMFYSVYSF*KSKFQRASEGIIIYFSNTTFTV 434
           ++ L F F+   L  +     +  F  SK    S  +I++F+ T  TV
Sbjct: 132 MWCLIFAFWVPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTV 179


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +3

Query: 291 VYTLDFCFYS*YLALILMFYSVYSF*KSKFQRASEGIIIYFSNTTFTV 434
           ++ L F F+   L  +     +  F  SK    S  +I++F+ T  TV
Sbjct: 132 MWCLIFAFWVPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTV 179


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +3

Query: 291 VYTLDFCFYS*YLALILMFYSVYSF*KSKFQRASEGIIIYFSNTTFTV 434
           ++ L F F+   L  +     +  F  SK    S  +I++F+ T  TV
Sbjct: 132 MWCLIFAFWVPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTV 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,557
Number of Sequences: 336
Number of extensions: 2647
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)