Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5377
         (504 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119173-1|AAM51033.1|  329|Drosophila melanogaster RH49985p pro...    28   6.2  
AE014297-679|AAF54172.2|  329|Drosophila melanogaster CG2781-PA ...    28   6.2  

>AY119173-1|AAM51033.1|  329|Drosophila melanogaster RH49985p
           protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 253 HSKNVLYSNVSNYLISCDYFWFSHSIYLYLYFWSF 149
           HS  + + N  NY I   YF  +H++  Y  F +F
Sbjct: 219 HSFQLFFKNDCNYPIGFAYFIGAHAVMFYFLFSNF 253


>AE014297-679|AAF54172.2|  329|Drosophila melanogaster CG2781-PA
           protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 253 HSKNVLYSNVSNYLISCDYFWFSHSIYLYLYFWSF 149
           HS  + + N  NY I   YF  +H++  Y  F +F
Sbjct: 219 HSFQLFFKNDCNYPIGFAYFIGAHAVMFYFLFSNF 253


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.306    0.129    0.332 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,000,751
Number of Sequences: 53049
Number of extensions: 133362
Number of successful extensions: 340
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)