Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5277
(644 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016007-1|AAV36892.1| 288|Drosophila melanogaster RE26656p pro... 129 4e-30
AE014297-419|AAF51902.1| 288|Drosophila melanogaster CG1153-PA ... 129 4e-30
AE014297-421|AAF51900.1| 233|Drosophila melanogaster CG15592-PA... 44 1e-04
AY070617-1|AAL48088.1| 233|Drosophila melanogaster RE71995p pro... 44 2e-04
AE014297-1476|AAF54775.1| 588|Drosophila melanogaster CG4066-PA... 34 0.19
BT001672-1|AAN71427.1| 315|Drosophila melanogaster RE50346p pro... 33 0.33
AY069684-1|AAL39829.1| 238|Drosophila melanogaster LD45549p pro... 33 0.33
AF275629-1|AAF78762.1| 508|Drosophila melanogaster bancal prote... 33 0.33
AF142631-1|AAF00596.1| 490|Drosophila melanogaster hnRNP K prot... 33 0.33
AE013599-3039|AAS64908.1| 315|Drosophila melanogaster CG13425-P... 33 0.33
AE013599-3038|AAM68390.2| 413|Drosophila melanogaster CG13425-P... 33 0.33
AE013599-3036|AAF57450.2| 496|Drosophila melanogaster CG13425-P... 33 0.33
AE013599-3035|AAM68389.2| 502|Drosophila melanogaster CG13425-P... 33 0.33
AJ238947-1|CAB64936.1| 496|Drosophila melanogaster heterogeneou... 31 1.3
AY118624-1|AAM49993.1| 648|Drosophila melanogaster RE22492p pro... 30 2.3
AE014297-435|AAF51890.3| 648|Drosophila melanogaster CG15598-PA... 30 2.3
BT011087-1|AAR82753.1| 249|Drosophila melanogaster RE74918p pro... 29 4.1
AE014297-431|AAF51892.1| 214|Drosophila melanogaster CG1157-PA ... 29 4.1
AE014298-1760|AAF48158.1| 659|Drosophila melanogaster CG15732-P... 28 9.4
>BT016007-1|AAV36892.1| 288|Drosophila melanogaster RE26656p
protein.
Length = 288
Score = 129 bits (311), Expect = 4e-30
Identities = 80/212 (37%), Positives = 114/212 (53%), Gaps = 23/212 (10%)
Frame = +3
Query: 45 TLFIFALIAATSALPAQDTSY-------SENDL-----DDCLKKDPTSCLKNKFFSYVDK 188
T + L+A ++ALPA++T END+ DCL+KD SC+K K FS+VDK
Sbjct: 7 TFGVLCLVALSAALPAEETRGHARNAIGGENDIMDSIYSDCLRKDSVSCVKYKLFSFVDK 66
Query: 189 YIGQKDSFAVTDGVKIYKSADVIQTGAPRSLD--------PLSRLRTYLETHSLSVEVKG 344
+G +D FA+T+GV + +S D Q A RS+ L+R+ ++L +H++ VE+KG
Sbjct: 67 VLGARDQFALTEGVTVVRSPDAPQQEAARSISGDESFESLALNRISSFLNSHTIKVELKG 126
Query: 345 TDILDAVTGAGRALQDTVTSFV---DDDAAEESRGKKKKASKILGPXXXXXXXXXXXXXX 515
DI+ AV+ GRAL+D S D +A EESRGKKKKA+KILGP
Sbjct: 127 ADIVQAVSSTGRALEDASESLFGSNDPNAPEESRGKKKKAAKILGPILALVALKAAALLP 186
Query: 516 XXXXXXXXXXXXXXXXXXXXXVLSAIIGLEEI 611
VLSA+IGL+++
Sbjct: 187 LLLGAIALIAGKALLIGKIALVLSAVIGLKKL 218
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 604 KKLMSQQKHVTYE 642
KKL+SQ+KHVTYE
Sbjct: 216 KKLLSQEKHVTYE 228
>AE014297-419|AAF51902.1| 288|Drosophila melanogaster CG1153-PA
protein.
Length = 288
Score = 129 bits (311), Expect = 4e-30
Identities = 80/212 (37%), Positives = 114/212 (53%), Gaps = 23/212 (10%)
Frame = +3
Query: 45 TLFIFALIAATSALPAQDTSY-------SENDL-----DDCLKKDPTSCLKNKFFSYVDK 188
T + L+A ++ALPA++T END+ DCL+KD SC+K K FS+VDK
Sbjct: 7 TFGVLCLVALSAALPAEETRGHARNAIGGENDIMDSIYSDCLRKDSVSCVKYKLFSFVDK 66
Query: 189 YIGQKDSFAVTDGVKIYKSADVIQTGAPRSLD--------PLSRLRTYLETHSLSVEVKG 344
+G +D FA+T+GV + +S D Q A RS+ L+R+ ++L +H++ VE+KG
Sbjct: 67 VLGARDQFALTEGVTVVRSPDAPQQEAARSISGDESFESLALNRISSFLNSHTIKVELKG 126
Query: 345 TDILDAVTGAGRALQDTVTSFV---DDDAAEESRGKKKKASKILGPXXXXXXXXXXXXXX 515
DI+ AV+ GRAL+D S D +A EESRGKKKKA+KILGP
Sbjct: 127 ADIVQAVSSTGRALEDASESLFGSNDPNAPEESRGKKKKAAKILGPILALVALKAAALLP 186
Query: 516 XXXXXXXXXXXXXXXXXXXXXVLSAIIGLEEI 611
VLSA+IGL+++
Sbjct: 187 LLLGAIALIAGKALLIGKIALVLSAVIGLKKL 218
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 604 KKLMSQQKHVTYE 642
KKL+SQ+KHVTYE
Sbjct: 216 KKLLSQEKHVTYE 228
>AE014297-421|AAF51900.1| 233|Drosophila melanogaster CG15592-PA
protein.
Length = 233
Score = 44.4 bits (100), Expect = 1e-04
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Frame = +3
Query: 36 MWRTLFIFALIAATSALPAQDTSYSENDLD---DCLKKDPTSCLKNKFFSYVDKYIGQKD 206
M++ + +FALIA+T+A ++ S + L DC ++ C+K + Y D +
Sbjct: 1 MFKFVCLFALIASTAAATSEADSLLTSALKMVKDCGERSMVLCMKERALHYFD---AENG 57
Query: 207 SFAVTDGVKIYKSADVIQTGAPRSLDPLSRLRTYLETHSLSVEVKGTDILDAVTGAGRAL 386
+T+G+ + K+ D I G RSL+ + +L +E V+ + + G L
Sbjct: 58 DVRLTEGIALVKT-DEIPVG--RSLNEM-QLPEEVEAREAEVDSLLVERVARFFGT-HTL 112
Query: 387 QDTVTSFVDDD---AAEESRGKKKKASKILGP 473
Q V D A EESRGKKK+ K L P
Sbjct: 113 QFKVPKDSIQDMQRALEESRGKKKEKKKYLMP 144
>AY070617-1|AAL48088.1| 233|Drosophila melanogaster RE71995p
protein.
Length = 233
Score = 43.6 bits (98), Expect = 2e-04
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Frame = +3
Query: 36 MWRTLFIFALIAATSALPAQDTSYSENDLD---DCLKKDPTSCLKNKFFSYVDKYIGQKD 206
M+ + +FALIA+T+A ++ S + L DC ++ C+K + Y D +
Sbjct: 1 MFEFVCLFALIASTAAATSEADSLLTSALKMVKDCGERSMVLCMKERALHYFD---AENG 57
Query: 207 SFAVTDGVKIYKSADVIQTGAPRSLDPLSRLRTYLETHSLSVEVKGTDILDAVTGAGRAL 386
+T+G+ + K+ D I G RSL+ + +L +E V+ + + G L
Sbjct: 58 DVRLTEGIALVKT-DEIPVG--RSLNEM-QLPEEVEAREAEVDSLLVERVARFFGT-HTL 112
Query: 387 QDTVTSFVDDD---AAEESRGKKKKASKILGP 473
Q V D A EESRGKKK+ K L P
Sbjct: 113 QFKVPKDSIQDMQRALEESRGKKKEKKKYLMP 144
>AE014297-1476|AAF54775.1| 588|Drosophila melanogaster CG4066-PA
protein.
Length = 588
Score = 33.9 bits (74), Expect = 0.19
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +3
Query: 210 FAVTDGVKIYKSADVIQTGAPRSLDPLSRLRTYLETHSLSVEVKGTDILDAVTGAGRALQ 389
F T + Y VI+ P +L ++ L TH+LS+ K TD+ A++G+
Sbjct: 489 FNQTQENRYYSVEAVIKAWTPTNLKEINDL-----THALSISQKRTDLAIAISGSAEYNT 543
Query: 390 DTV-TSFVDDDAAEE-SRGKKKKASKILG 470
+T T F+ E+ ++ +K + +ILG
Sbjct: 544 ETYPTRFISYKGIEDINQSRKTRTPQILG 572
>BT001672-1|AAN71427.1| 315|Drosophila melanogaster RE50346p
protein.
Length = 315
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 461 NPWANNGDYGYEDDGNNASCDRSYSVNSRQGVTDRKTGIGLVSDNWFG 604
NPWAN G + GNNA ++ NS G G G +N FG
Sbjct: 90 NPWANGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFG 137
>AY069684-1|AAL39829.1| 238|Drosophila melanogaster LD45549p
protein.
Length = 238
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 461 NPWANNGDYGYEDDGNNASCDRSYSVNSRQGVTDRKTGIGLVSDNWFG 604
NPWAN G + GNNA ++ NS G G G +N FG
Sbjct: 10 NPWANGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFG 57
>AF275629-1|AAF78762.1| 508|Drosophila melanogaster bancal protein
protein.
Length = 508
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 461 NPWANNGDYGYEDDGNNASCDRSYSVNSRQGVTDRKTGIGLVSDNWFG 604
NPWAN G + GNNA ++ NS G G G +N FG
Sbjct: 268 NPWANGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFG 315
>AF142631-1|AAF00596.1| 490|Drosophila melanogaster hnRNP K protein
homolog protein.
Length = 490
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 461 NPWANNGDYGYEDDGNNASCDRSYSVNSRQGVTDRKTGIGLVSDNWFG 604
NPWAN G + GNNA ++ NS G G G +N FG
Sbjct: 266 NPWANGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFG 313
>AE013599-3039|AAS64908.1| 315|Drosophila melanogaster CG13425-PD,
isoform D protein.
Length = 315
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 461 NPWANNGDYGYEDDGNNASCDRSYSVNSRQGVTDRKTGIGLVSDNWFG 604
NPWAN G + GNNA ++ NS G G G +N FG
Sbjct: 90 NPWANGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFG 137
>AE013599-3038|AAM68390.2| 413|Drosophila melanogaster CG13425-PB,
isoform B protein.
Length = 413
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 461 NPWANNGDYGYEDDGNNASCDRSYSVNSRQGVTDRKTGIGLVSDNWFG 604
NPWAN G + GNNA ++ NS G G G +N FG
Sbjct: 185 NPWANGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFG 232
>AE013599-3036|AAF57450.2| 496|Drosophila melanogaster CG13425-PA,
isoform A protein.
Length = 496
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 461 NPWANNGDYGYEDDGNNASCDRSYSVNSRQGVTDRKTGIGLVSDNWFG 604
NPWAN G + GNNA ++ NS G G G +N FG
Sbjct: 268 NPWANGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFG 315
>AE013599-3035|AAM68389.2| 502|Drosophila melanogaster CG13425-PC,
isoform C protein.
Length = 502
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 461 NPWANNGDYGYEDDGNNASCDRSYSVNSRQGVTDRKTGIGLVSDNWFG 604
NPWAN G + GNNA ++ NS G G G +N FG
Sbjct: 274 NPWANGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFG 321
>AJ238947-1|CAB64936.1| 496|Drosophila melanogaster heterogeneous
nuclear ribonucleoprotein(hnRNP) protein.
Length = 496
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 461 NPWANNGDYGYEDDGNNASCDRSYSVNSRQGVTDRKTGIGLVSDNWFG 604
NPWAN G + GNN ++ NS G G G +N FG
Sbjct: 268 NPWANGGGGDVDGFGNNPGGAGGFAGNSFGGGAGGPFGGGSFGNNGFG 315
>AY118624-1|AAM49993.1| 648|Drosophila melanogaster RE22492p
protein.
Length = 648
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 126 DCLKKDPTSCLKNKFFSYVDKYIGQKDSFAVTDGVKIYKS 245
DC K SC + FSY+D + +D VT +K +K+
Sbjct: 162 DCYLKPDVSCFQKNVFSYLDNVLDVQD-VNVTQRLKFFKN 200
>AE014297-435|AAF51890.3| 648|Drosophila melanogaster CG15598-PA
protein.
Length = 648
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 126 DCLKKDPTSCLKNKFFSYVDKYIGQKDSFAVTDGVKIYKS 245
DC K SC + FSY+D + +D VT +K +K+
Sbjct: 162 DCYLKPDVSCFQKNVFSYLDNVLDVQD-VNVTQRLKFFKN 200
>BT011087-1|AAR82753.1| 249|Drosophila melanogaster RE74918p
protein.
Length = 249
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 192 IGQKDSFAVTDGVKIYKSADVIQTGAPRSLDPLS-RLRTYLETHSLSVEVKGTD 350
+ ++S A+ G++I +S GA ++++ R YLETH L++ G +
Sbjct: 73 LDSEESVALFGGLRIDRSESGRSFGASKAVESFEDRAERYLETHELNLSFSGDE 126
>AE014297-431|AAF51892.1| 214|Drosophila melanogaster CG1157-PA
protein.
Length = 214
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 192 IGQKDSFAVTDGVKIYKSADVIQTGAPRSLDPLS-RLRTYLETHSLSVEVKGTD 350
+ ++S A+ G++I +S GA ++++ R YLETH L++ G +
Sbjct: 38 LDSEESVALFGGLRIDRSESGRSFGASKAVESFEDRAERYLETHELNLSFSGDE 91
>AE014298-1760|AAF48158.1| 659|Drosophila melanogaster CG15732-PA
protein.
Length = 659
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 235 IFTPSVTANESFCPIYLSTYEKNLFFRQDVGSFFKQS 125
IF + E FC + +S + F RQ VGS K +
Sbjct: 152 IFPDELLEREFFCIVVVSEIQSRQFVRQTVGSIVKSN 188
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,352,541
Number of Sequences: 53049
Number of extensions: 533565
Number of successful extensions: 2244
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2180
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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