Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5275
(577 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 29 2.4
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical pr... 28 5.5
X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr... 27 7.2
U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin st... 27 7.2
U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin st... 27 7.2
AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical ... 27 7.2
AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical ... 27 7.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 27 9.5
U39676-3|AAB37032.2| 941|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 27 9.5
AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin... 27 9.5
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 27 9.5
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -3
Query: 455 ESVAGGRADSEAGWGELHQRPSRTSDELPYRVICDGGLVASTGVDPYRSPPAERRPP 285
ES+A G +G+ + QRP T+ +LPY + G V + P PP R P
Sbjct: 708 ESMATGAPLDLSGFPQYQQRPVATNSKLPYFIPPPQGYVGP--LPPAPPPPTFRVAP 762
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 462 RSGERGGWKSGQRGG-LGRTAPTTFTYV**ASVQSHMRRWPCSEHRSGSISLSARRE 295
R G+RGG++ G RGG G A+++ WPC + G+ + + RRE
Sbjct: 361 RGGDRGGFRGGDRGGDRGGFRGGRGVGGGNANMEQRKNDWPCEQ--CGNSNFAFRRE 415
>Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical
protein C09H6.3 protein.
Length = 593
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = -1
Query: 256 LTCPRCKQTSSYNNVYHYVGRSQSNRTLLHFTFNFQFIKQNCQCSQIRQKKYFFFYKRQV 77
+ C R + ++ + Q + L +T NF+ K + QC+ + FY R
Sbjct: 29 IKCARSTLSMEISDEMKAICNLQLGKLLFFYTDNFELAKNHLQCAYDKMSAMGTFYTRDK 88
Query: 76 SRAL 65
A+
Sbjct: 89 MNAI 92
>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
protein.
Length = 1613
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 294 SLCGRRAIWIHSGARYKATVAYDSVRKLIRRT*RSL 401
+L R+A W+ +G+ + V Y ++R L+R R L
Sbjct: 452 NLVVRQAAWLAAGSVVRGIVDYKNIRPLVREDKREL 487
>U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
b protein.
Length = 1558
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 294 SLCGRRAIWIHSGARYKATVAYDSVRKLIRRT*RSL 401
+L R+A W+ +G+ + V Y ++R L+R R L
Sbjct: 452 NLVVRQAAWLAAGSVVRGIVDYKNIRPLVREDKREL 487
>U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
a protein.
Length = 1613
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 294 SLCGRRAIWIHSGARYKATVAYDSVRKLIRRT*RSL 401
+L R+A W+ +G+ + V Y ++R L+R R L
Sbjct: 452 NLVVRQAAWLAAGSVVRGIVDYKNIRPLVREDKREL 487
>AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical
protein ZK1025.4b protein.
Length = 452
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 187 SNRTLLHFTFNFQFIKQNCQCSQIRQKKYFFF 92
SN T+LHF FN + IK N + +K Y FF
Sbjct: 350 SNGTVLHFRFNIKEIKAN-----VVEKPYRFF 376
>AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical
protein ZK1025.4a protein.
Length = 402
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 187 SNRTLLHFTFNFQFIKQNCQCSQIRQKKYFFF 92
SN T+LHF FN + IK N + +K Y FF
Sbjct: 350 SNGTVLHFRFNIKEIKAN-----VVEKPYRFF 376
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 499 STSVLSGDSKEPAPAP--SPADSG 564
S+ SG S EPAPAP +PA SG
Sbjct: 443 SSGGYSGGSSEPAPAPEAAPASSG 466
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 499 STSVLSGDSKEPAPAP--SPADSG 564
S+ SG S EPAPAP +PA SG
Sbjct: 443 SSGGYSGGSSEPAPAPEAAPASSG 466
>U39676-3|AAB37032.2| 941|Caenorhabditis elegans Hypothetical
protein C23F12.2 protein.
Length = 941
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 469 QRHHSAIVTKSTSVLSGDSKEPAPAPSPADS 561
Q+HH + T+S+S++ P P P+ A S
Sbjct: 568 QQHHQTVPTQSSSIVQVVQPIPPPPPTLAQS 598
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 81 KFPALYKIVNNEFLNCSDYAARATRS 4
KFP L K NNE C +AAR S
Sbjct: 255 KFPQLVKSTNNEGSTCLHWAARCGSS 280
>AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin
protein 44 protein.
Length = 664
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -3
Query: 320 PYRSPPAERRPPSGLNAIGRITDLPSL*TDVIL*QCLSLCRAITI*QNIAAFH-IQFSIY 144
P +P A R P+G +++ IT + T +I +CR I+ N+ + H + +
Sbjct: 105 PATTPEAPGRCPAGSSSLNDITCVKLFDTPMIFQGANLVCRNISGGGNLVSIHSAEDNTA 164
Query: 143 KTKLSMFTDKTKKIF 99
L+ +KTK I+
Sbjct: 165 LLNLAALNNKTKTIW 179
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 81 KFPALYKIVNNEFLNCSDYAARATRS 4
KFP L K NNE C +AAR S
Sbjct: 253 KFPQLVKSTNNEGSTCLHWAARCGSS 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,959,058
Number of Sequences: 27780
Number of extensions: 248356
Number of successful extensions: 986
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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