Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5274
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069613-1|AAL39758.1|  343|Drosophila melanogaster LD37470p pro...   146   2e-35
AJ430055-1|CAD22537.1|  343|Drosophila melanogaster twinfilin pr...   146   2e-35
AE014297-1802|AAF55022.1|  343|Drosophila melanogaster CG3172-PA...   146   2e-35
U24676-1|AAC46963.1|  148|Drosophila melanogaster twinstar protein.    37   0.029
U24490-1|AAC46962.1|  148|Drosophila melanogaster twinstar protein.    37   0.029
U08217-1|AAA19856.1|  148|Drosophila melanogaster protein ( Dros...    37   0.029
AE014298-2759|AAF48877.1|  148|Drosophila melanogaster CG6873-PA...    37   0.029
AE013599-3787|AAF47146.1|  148|Drosophila melanogaster CG4254-PA...    37   0.029
BT011128-1|AAR82795.1| 1084|Drosophila melanogaster LD07113p pro...    32   0.83 
AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p pro...    32   0.83 
AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-P...    32   0.83 
AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-P...    32   0.83 

>AY069613-1|AAL39758.1|  343|Drosophila melanogaster LD37470p
           protein.
          Length = 343

 Score =  146 bits (355), Expect = 2e-35
 Identities = 64/106 (60%), Positives = 83/106 (78%)
 Frame = +3

Query: 15  KCRDSKLRVLKVTIENEQLTMAKHFSTKGTWEHDFDKYVPSLIEEDQPCYILYRFDSKNS 194
           K ++ K RV+KV+IENEQL+      TK  WE D+DK +  L+E+D PCYILYR D+K  
Sbjct: 19  KAKNGKFRVIKVSIENEQLSCGATAETKKDWERDYDKLIGPLLEKDVPCYILYRLDAKIP 78

Query: 195 LGHEWLLLSWSPDSAPVRQKMLYASTKATLKQEFGSAHIKDEMHAT 332
           LG+ WLL+SW+PD+A +RQKM+YASTKATLK EFGSA+I +E+HAT
Sbjct: 79  LGYSWLLISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHAT 124



 Score =  132 bits (319), Expect = 4e-31
 Identities = 59/114 (51%), Positives = 84/114 (73%)
 Frame = +2

Query: 338 EVSLKGYKAHLSGVSAPAPLTDREEALKELQESEHNTNYGVDARQSTMGGVAFPITEAAK 517
           E +L+GY+ H    +APAPLT REE LKEL+++E +T    + R  T+GG+  P++EA  
Sbjct: 128 ECTLEGYRRHKQDFAAPAPLTSREEELKELRKTEVHTEINTNTRHQTLGGINCPLSEATV 187

Query: 518 QGIVDLQRGSYNYLQFRIDLEEEKINLSKASKILLEELPLQVPNDQARYHLYIF 679
             + DL RG ++YLQFRIDLEEE+I++S+A+K+ L +LP QVP D ARYHL++F
Sbjct: 188 AAVQDLVRGKHDYLQFRIDLEEEQIHVSRAAKVELADLPKQVPEDHARYHLFLF 241


>AJ430055-1|CAD22537.1|  343|Drosophila melanogaster twinfilin
           protein.
          Length = 343

 Score =  146 bits (355), Expect = 2e-35
 Identities = 64/106 (60%), Positives = 83/106 (78%)
 Frame = +3

Query: 15  KCRDSKLRVLKVTIENEQLTMAKHFSTKGTWEHDFDKYVPSLIEEDQPCYILYRFDSKNS 194
           K ++ K RV+KV+IENEQL+      TK  WE D+DK +  L+E+D PCYILYR D+K  
Sbjct: 19  KAKNGKFRVIKVSIENEQLSCGATAETKKDWERDYDKLIGPLLEKDVPCYILYRLDAKIP 78

Query: 195 LGHEWLLLSWSPDSAPVRQKMLYASTKATLKQEFGSAHIKDEMHAT 332
           LG+ WLL+SW+PD+A +RQKM+YASTKATLK EFGSA+I +E+HAT
Sbjct: 79  LGYSWLLISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHAT 124



 Score =  132 bits (319), Expect = 4e-31
 Identities = 59/114 (51%), Positives = 84/114 (73%)
 Frame = +2

Query: 338 EVSLKGYKAHLSGVSAPAPLTDREEALKELQESEHNTNYGVDARQSTMGGVAFPITEAAK 517
           E +L+GY+ H    +APAPLT REE LKEL+++E +T    + R  T+GG+  P++EA  
Sbjct: 128 ECTLEGYRRHKQDFAAPAPLTSREEELKELRKTEVHTEINTNTRHQTLGGINCPLSEATV 187

Query: 518 QGIVDLQRGSYNYLQFRIDLEEEKINLSKASKILLEELPLQVPNDQARYHLYIF 679
             + DL RG ++YLQFRIDLEEE+I++S+A+K+ L +LP QVP D ARYHL++F
Sbjct: 188 AAVQDLVRGKHDYLQFRIDLEEEQIHVSRAAKVELADLPKQVPEDHARYHLFLF 241


>AE014297-1802|AAF55022.1|  343|Drosophila melanogaster CG3172-PA
           protein.
          Length = 343

 Score =  146 bits (355), Expect = 2e-35
 Identities = 64/106 (60%), Positives = 83/106 (78%)
 Frame = +3

Query: 15  KCRDSKLRVLKVTIENEQLTMAKHFSTKGTWEHDFDKYVPSLIEEDQPCYILYRFDSKNS 194
           K ++ K RV+KV+IENEQL+      TK  WE D+DK +  L+E+D PCYILYR D+K  
Sbjct: 19  KAKNGKFRVIKVSIENEQLSCGATAETKKDWERDYDKLIGPLLEKDVPCYILYRLDAKIP 78

Query: 195 LGHEWLLLSWSPDSAPVRQKMLYASTKATLKQEFGSAHIKDEMHAT 332
           LG+ WLL+SW+PD+A +RQKM+YASTKATLK EFGSA+I +E+HAT
Sbjct: 79  LGYSWLLISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHAT 124



 Score =  132 bits (319), Expect = 4e-31
 Identities = 59/114 (51%), Positives = 84/114 (73%)
 Frame = +2

Query: 338 EVSLKGYKAHLSGVSAPAPLTDREEALKELQESEHNTNYGVDARQSTMGGVAFPITEAAK 517
           E +L+GY+ H    +APAPLT REE LKEL+++E +T    + R  T+GG+  P++EA  
Sbjct: 128 ECTLEGYRRHKQDFAAPAPLTSREEELKELRKTEVHTEINTNTRHQTLGGINCPLSEATV 187

Query: 518 QGIVDLQRGSYNYLQFRIDLEEEKINLSKASKILLEELPLQVPNDQARYHLYIF 679
             + DL RG ++YLQFRIDLEEE+I++S+A+K+ L +LP QVP D ARYHL++F
Sbjct: 188 AAVQDLVRGKHDYLQFRIDLEEEQIHVSRAAKVELADLPKQVPEDHARYHLFLF 241


>U24676-1|AAC46963.1|  148|Drosophila melanogaster twinstar protein.
          Length = 148

 Score = 36.7 bits (81), Expect = 0.029
 Identities = 16/36 (44%), Positives = 26/36 (72%)
 Frame = +3

Query: 183 SKNSLGHEWLLLSWSPDSAPVRQKMLYASTKATLKQ 290
           S++S   +  L+SW PD+A V++KMLY+S+   LK+
Sbjct: 81  SESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKK 116


>U24490-1|AAC46962.1|  148|Drosophila melanogaster twinstar protein.
          Length = 148

 Score = 36.7 bits (81), Expect = 0.029
 Identities = 16/36 (44%), Positives = 26/36 (72%)
 Frame = +3

Query: 183 SKNSLGHEWLLLSWSPDSAPVRQKMLYASTKATLKQ 290
           S++S   +  L+SW PD+A V++KMLY+S+   LK+
Sbjct: 81  SESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKK 116


>U08217-1|AAA19856.1|  148|Drosophila melanogaster protein (
           Drosophila melanogastercofilin/actin depolymerizing
           factor homolog mRNA, completecds. ).
          Length = 148

 Score = 36.7 bits (81), Expect = 0.029
 Identities = 16/36 (44%), Positives = 26/36 (72%)
 Frame = +3

Query: 183 SKNSLGHEWLLLSWSPDSAPVRQKMLYASTKATLKQ 290
           S++S   +  L+SW PD+A V++KMLY+S+   LK+
Sbjct: 81  SESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKK 116


>AE014298-2759|AAF48877.1|  148|Drosophila melanogaster CG6873-PA
           protein.
          Length = 148

 Score = 36.7 bits (81), Expect = 0.029
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +3

Query: 195 LGHEWLLLSWSPDSAPVRQKMLYASTKATLKQEF 296
           L  + +L+ W P  A ++ KMLY+ST A LK+EF
Sbjct: 85  LKEKLILMLWCPTLARIKDKMLYSSTFAVLKREF 118


>AE013599-3787|AAF47146.1|  148|Drosophila melanogaster CG4254-PA
           protein.
          Length = 148

 Score = 36.7 bits (81), Expect = 0.029
 Identities = 16/36 (44%), Positives = 26/36 (72%)
 Frame = +3

Query: 183 SKNSLGHEWLLLSWSPDSAPVRQKMLYASTKATLKQ 290
           S++S   +  L+SW PD+A V++KMLY+S+   LK+
Sbjct: 81  SESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKK 116


>BT011128-1|AAR82795.1| 1084|Drosophila melanogaster LD07113p
           protein.
          Length = 1084

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 21/69 (30%), Positives = 28/69 (40%)
 Frame = +3

Query: 3   EYISKCRDSKLRVLKVTIENEQLTMAKHFSTKGTWEHDFDKYVPSLIEEDQPCYILYRFD 182
           +Y  +   +KL+ L  T   E L   KH   K   EHDFD      I +  P Y     +
Sbjct: 704 QYKLRSDTNKLKELMFTDSREHLESEKHIEVKLQDEHDFDLDEEPAIGKKDPTYTKENLE 763

Query: 183 SKNSLGHEW 209
            +  L  EW
Sbjct: 764 LQERL--EW 770


>AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p
           protein.
          Length = 1193

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 21/69 (30%), Positives = 28/69 (40%)
 Frame = +3

Query: 3   EYISKCRDSKLRVLKVTIENEQLTMAKHFSTKGTWEHDFDKYVPSLIEEDQPCYILYRFD 182
           +Y  +   +KL+ L  T   E L   KH   K   EHDFD      I +  P Y     +
Sbjct: 606 QYKLRSDTNKLKELMFTDSREHLESEKHIEVKLQDEHDFDLDEEPAIGKKDPTYTKENLE 665

Query: 183 SKNSLGHEW 209
            +  L  EW
Sbjct: 666 LQERL--EW 672


>AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-PB,
           isoform B protein.
          Length = 1304

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 21/69 (30%), Positives = 28/69 (40%)
 Frame = +3

Query: 3   EYISKCRDSKLRVLKVTIENEQLTMAKHFSTKGTWEHDFDKYVPSLIEEDQPCYILYRFD 182
           +Y  +   +KL+ L  T   E L   KH   K   EHDFD      I +  P Y     +
Sbjct: 717 QYKLRSDTNKLKELMFTDSREHLESEKHIEVKLQDEHDFDLDEEPAIGKKDPTYTKENLE 776

Query: 183 SKNSLGHEW 209
            +  L  EW
Sbjct: 777 LQERL--EW 783


>AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-PA,
            isoform A protein.
          Length = 1469

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 21/69 (30%), Positives = 28/69 (40%)
 Frame = +3

Query: 3    EYISKCRDSKLRVLKVTIENEQLTMAKHFSTKGTWEHDFDKYVPSLIEEDQPCYILYRFD 182
            +Y  +   +KL+ L  T   E L   KH   K   EHDFD      I +  P Y     +
Sbjct: 882  QYKLRSDTNKLKELMFTDSREHLESEKHIEVKLQDEHDFDLDEEPAIGKKDPTYTKENLE 941

Query: 183  SKNSLGHEW 209
             +  L  EW
Sbjct: 942  LQERL--EW 948


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,187,916
Number of Sequences: 53049
Number of extensions: 652441
Number of successful extensions: 1613
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1613
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)