Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5273
(584 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1805.05 |cki3||serine/threonine protein kinase Cki3|Schizosa... 27 2.0
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 2.0
SPAC17A2.03c |vma6||V-type ATPase subunit d|Schizosaccharomyces ... 27 2.7
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 27 2.7
SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22 |Schiz... 26 3.5
SPBC13G1.15c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 26 4.7
SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|ch... 25 6.2
SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase |Schizosacc... 25 6.2
SPBC2A9.06c |||di-trans,poly-cis-decaprenylcistransferase|Schizo... 25 8.1
SPBC2D10.09 |||3-hydroxyisobutyryl-CoA hydrolase|Schizosaccharom... 25 8.1
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 8.1
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 25 8.1
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 25 8.1
>SPAC1805.05 |cki3||serine/threonine protein kinase
Cki3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 439
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +3
Query: 177 IYNFLVSDLKPAETCKMIGICGNLTSAPISPLVARELVVKVQ 302
+YN LV DL + CG S ++A++++ ++Q
Sbjct: 82 MYNLLVMDLLGPSLEDLFDYCGRRFSPKTVAMIAKQMITRIQ 123
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 2.0
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = -3
Query: 531 TPPVLRPSLCPRSWCR*VAPXXXXXXXXXXXXRPCS--AAPLRTCAPAAVRIPPRSPAP 361
TPP L PS P S P P + A PL PAA +PP +PAP
Sbjct: 419 TPPSLPPS-APPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
>SPAC17A2.03c |vma6||V-type ATPase subunit d|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 343
Score = 26.6 bits (56), Expect = 2.7
Identities = 31/100 (31%), Positives = 37/100 (37%), Gaps = 5/100 (5%)
Frame = +3
Query: 66 VANTTELEFYKVLQGLCKQTGKFKDECLH---LAEQYYPVIYNFLVSDLKPA--ETCKMI 230
VA E E Y V+ FKD CL L EQ+ +I N L CK I
Sbjct: 139 VATNVE-ELYSVVLIETPLAPYFKD-CLSADDLDEQHIEIIRNTLYKAYLEDFYNFCKKI 196
Query: 231 GICGNLTSAPISPLVARELVVKVQPKLIGAEESKIARVPL 350
G C T PI A + + G E SK R +
Sbjct: 197 GACTADTMLPILEFEADRRAITITINSFGTELSKEERAKM 236
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +3
Query: 141 ECLHLAEQYYPVIYNFLVSDLKPAETCKMIGICGNLTSAPIS-----PLVARELVVKVQP 305
E +HL+ + + +VS++ P T + G+ + PIS P+V++ K P
Sbjct: 724 EAVHLSTAFSTAPVSTIVSNISPLPTVAPPNVSGSPSETPISKPEKVPVVSQ--TEKALP 781
Query: 306 KLIGAEESK 332
K +G + K
Sbjct: 782 KPLGVDTEK 790
>SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 526
Score = 26.2 bits (55), Expect = 3.5
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +3
Query: 87 EFYKVLQGLCKQTGKFKDECLHLAE----QYYPVIYNFLVSDLKP 209
EF++ L L K KD C + AE Y + F+ DLKP
Sbjct: 239 EFFRALHSLPKHILPEKDACFYAAEVTAALEYLHLMGFIYRDLKP 283
>SPBC13G1.15c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 111
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +3
Query: 309 LIGAEESKIARVPLAKQMEPASAAVSVLPLERMFVAAPQSKAACAFCQYFLHY 467
L+ A + K++ + + + V+ L R V S + F +Y+LHY
Sbjct: 17 LLEANKYKLSEITFKVYISIRRLLIVVITLYRRIVECCASLCSLIFSKYYLHY 69
>SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 25.4 bits (53), Expect = 6.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 432 PCSAAPLRTCAPAAVRIPPRSPAPFVLLTVHE 337
P S APL T A +R+ P+P +L V +
Sbjct: 177 PHSPAPLSTMQTALMRLRTYHPSPIILKPVEQ 208
>SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 518
Score = 25.4 bits (53), Expect = 6.2
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 129 KFKDECLHLAEQYYPVIYNFLVSDLKPAETCKMIGICGNLTSAPISPLVARELVV 293
+++D+C LA ++FL+ TC+ I G + P SP +A L V
Sbjct: 73 EWEDKCTQLANAPSKAEFDFLIKQFLTPTTCQPKVIIG-YDTRPSSPRLAELLKV 126
>SPBC2A9.06c |||di-trans,
poly-cis-decaprenylcistransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 25.0 bits (52), Expect = 8.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 49 ICETFSSRILLNSNSIKFFKA 111
+CE F IL +N + FFKA
Sbjct: 225 LCEIFHDPILYTTNYLTFFKA 245
>SPBC2D10.09 |||3-hydroxyisobutyryl-CoA
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 25.0 bits (52), Expect = 8.1
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 282 ELVVKVQPKLIGAEESKIARVPLAK 356
+++ + PKL+ EES +A+V + K
Sbjct: 83 DMIDSILPKLVSLEESNLAKVIILK 107
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.0 bits (52), Expect = 8.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 37 SWSNICETFSSRILLNSNSIKFFKASASKPENSRTNVYT*PNSTIRS 177
S SNI + S+ + L++N FK + S+P N Y+ +IR+
Sbjct: 350 SSSNIDKVTSNDLYLDNNLQSHFKVTESQPTNLGRKEYSNSPFSIRA 396
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 25.0 bits (52), Expect = 8.1
Identities = 10/46 (21%), Positives = 23/46 (50%)
Frame = +3
Query: 348 LAKQMEPASAAVSVLPLERMFVAAPQSKAACAFCQYFLHYLQVQLS 485
+ K + A+ ++ +P+ R+F +++ C F Y+ V+ S
Sbjct: 22 VGKDLPTANEELTTVPVIRVFGLNEEAETVCCFIHNVFPYIYVEYS 67
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.0 bits (52), Expect = 8.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 423 AAPLRTCAPAAVRIPPRSPAP 361
AAP+ A AAV +PP +PAP
Sbjct: 384 AAPVAAAA-AAVPVPPPAPAP 403
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,111,399
Number of Sequences: 5004
Number of extensions: 38072
Number of successful extensions: 132
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 252150250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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