Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5271
         (401 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92804-5|CAD89722.2|  320|Caenorhabditis elegans Hypothetical pr...    31   0.41 
Z81536-4|CAB04364.1|  310|Caenorhabditis elegans Hypothetical pr...    28   2.2  
Z92973-4|CAE18004.2|  328|Caenorhabditis elegans Hypothetical pr...    28   2.9  
AF016688-6|AAB66074.2|  274|Caenorhabditis elegans Hypothetical ...    27   3.8  
AF014939-7|AAB63929.2|  343|Caenorhabditis elegans Serpentine re...    27   3.8  
Z81508-9|CAB04140.2|  310|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z78064-8|CAO82042.1|  357|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z78059-1|CAH04725.2|  348|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical pr...    26   8.8  
AF016447-2|AAG24012.1|  339|Caenorhabditis elegans Hypothetical ...    26   8.8  

>Z92804-5|CAD89722.2|  320|Caenorhabditis elegans Hypothetical
           protein K05D4.8 protein.
          Length = 320

 Score = 30.7 bits (66), Expect = 0.41
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
 Frame = +2

Query: 134 FAMCLHYYIIEICIVHCFYCVIYVSN*LLVRDMLVF-YASFLSNTIVRKFYL----FIFV 298
           FA+      I  C++  FY V+Y +N    R   +F     + +T+VR ++L    F+ +
Sbjct: 27  FALLGGICAIVFCVIFPFYIVVYRTNRQRERSTPIFPIIKHIHSTVVRTYFLLFGCFVII 86

Query: 299 TVSKLIKTI*LFLI 340
            +S  + ++ L L+
Sbjct: 87  IISFALSSMLLILV 100


>Z81536-4|CAB04364.1|  310|Caenorhabditis elegans Hypothetical
           protein F40D4.5 protein.
          Length = 310

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = +1

Query: 94  VETSTTYLKVVESLRHVLALLYY*N----LYCSLFLLRNICIKLITCKGYASFLC 246
           + + ++YL+ V S+ H++ LL+       L+  + L RN+C   I+   Y  F+C
Sbjct: 40  LRSKSSYLQCVLSVSHIICLLFEIPNAALLFTGIRLKRNVCFPAISI--YVFFIC 92


>Z92973-4|CAE18004.2|  328|Caenorhabditis elegans Hypothetical
           protein Y6G8.4 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +2

Query: 152 YYIIEICIVHCFYCVIYVSN*LLVRDMLVFYASFLSNTIVRKFY--LFIFVTVSKLIKTI 325
           Y +++I    CF+ VI + + +L    L F+++ LSN    KF+  L IF+     + TI
Sbjct: 59  YKMVKIAYF-CFFMVIVIGSVIL----LTFFSNILSNPSFEKFHIVLIIFLLFGGAVVTI 113


>AF016688-6|AAB66074.2|  274|Caenorhabditis elegans Hypothetical
           protein F18A12.2 protein.
          Length = 274

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 205 IKLITCKGYA--SFLC*FFK*HNCQKILFIYICYGIETNKNHLTFSYSKQKKKLE 363
           IKLI   G +  SF   FF   NC+K  F  I   ++++KN + F   K    ++
Sbjct: 16  IKLIIIIGVSILSFFLLFFDIKNCEKFDFKSIKITLKSHKNRICFEKFKNTYNID 70


>AF014939-7|AAB63929.2|  343|Caenorhabditis elegans Serpentine
           receptor, class h protein192 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +2

Query: 134 FAMCLHYYIIEICIVHCF--YCVIYVSN*LLVRDMLVFYASFLSNTIVRKFYLFIFVTVS 307
           F +C+H   +    +H F  YC+IY +   +V   + +Y   L   I+   Y F F+T  
Sbjct: 18  FLLCMHIVTVISIPIHFFGMYCIIYKTP--VVMKTVKWYLFALHVWIIAFDYSFSFLTAP 75

Query: 308 KLI 316
            L+
Sbjct: 76  FLL 78


>Z81508-9|CAB04140.2|  310|Caenorhabditis elegans Hypothetical
           protein F20E11.2 protein.
          Length = 310

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = +1

Query: 91  TVETSTTYLKVVESLRHVLALLYY*N----LYCSLFLLRNICIKLITCKGYASFLC 246
           ++ + ++YL+   S+ H++ LL+       L+  + L RN+C   I+   Y  F+C
Sbjct: 39  SLRSKSSYLQCALSVSHIICLLFEIPNAALLFTGIRLKRNVCFPAISI--YVFFIC 92


>Z78064-8|CAO82042.1|  357|Caenorhabditis elegans Hypothetical
           protein F57B1.9a protein.
          Length = 357

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 22/99 (22%), Positives = 52/99 (52%)
 Frame = +2

Query: 2   KFGK*IYWLCGVLLALNAITLCYEIGVNLLLLRPQLHT*RWLKAFAMCLHYYIIEICIVH 181
           K  K  ++LC + L++  I++   + +N+      L T  ++K+ A  L  YII+I    
Sbjct: 81  KHMKFFWFLCMLTLSIFIISIL-NLLINVPATLFSLLTKDFVKSEAFLLISYIIDI---- 135

Query: 182 CFYCVIYVSN*LLVRDMLVFYASFLSNTIVRKFYLFIFV 298
           C Y +++ +  + V+   VF+   L++++    +++ ++
Sbjct: 136 CHYTILFCNLVIAVQRCFVFFFRNLADSVFDTPFMYAWM 174


>Z78059-1|CAH04725.2|  348|Caenorhabditis elegans Hypothetical
           protein C34B4.5 protein.
          Length = 348

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 11/63 (17%), Positives = 33/63 (52%)
 Frame = +2

Query: 152 YYIIEICIVHCFYCVIYVSN*LLVRDMLVFYASFLSNTIVRKFYLFIFVTVSKLIKTI*L 331
           Y I+   I  C + +++ +  + ++   VF+   +S+ I    Y++I++ +  ++ ++ L
Sbjct: 119 YLIMSYVIDFCLHSILFSNFVMAIQRFAVFFHLHISDIIFESPYIYIWLVMIYVLPSLTL 178

Query: 332 FLI 340
             +
Sbjct: 179 IFL 181


>Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical
           protein R05H5.6 protein.
          Length = 337

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
 Frame = +2

Query: 23  WLCGVLLALNAITLCYE---IGVNLLL---LRPQLHT*RWLKAFAMCLHYYIIEICIVHC 184
           WLC  LLA+N++ L +    + +N +L    R  L T R+     +    +   I  +H 
Sbjct: 183 WLCYSLLAINSVNLVFNYFLVKINTILKEKWRNSLST-RYQMEENIITTKFSTFISFIHV 241

Query: 185 FYCVIYVSN*LLVR 226
           F+  +Y+   L++R
Sbjct: 242 FFFSLYLIFTLIIR 255


>AF016447-2|AAG24012.1|  339|Caenorhabditis elegans Hypothetical
           protein C54F6.9 protein.
          Length = 339

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 265 NCQKILFIYICYGIETNKNHLTFSYSKQKKKLEGG 369
           NC+K+     CY + TN NHL  +  + K+ L+ G
Sbjct: 42  NCKKL---NNCYEVSTNSNHLKCAACRFKRCLQLG 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,412,364
Number of Sequences: 27780
Number of extensions: 149967
Number of successful extensions: 339
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)