Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5270
(308 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 98 1e-21
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 98 1e-21
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 92 7e-20
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510... 30 0.32
12_02_0735 - 22636835-22639502,22639755-22640734 30 0.43
06_01_0083 - 659510-661267,661577-662384,662700-663646 29 0.56
05_02_0043 + 5964749-5966406,5966725-5966791,5967174-5967329,596... 29 0.98
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647... 28 1.3
08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378 28 1.7
05_03_0323 - 12424243-12424776 28 1.7
04_04_0946 - 29579779-29580004,29580098-29580210 27 2.3
02_05_0101 - 25824093-25824112,25824734-25824842,25824927-258264... 27 2.3
01_06_1755 - 39673030-39673338 27 2.3
12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753 27 3.0
12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,731... 27 3.0
04_04_0669 + 27110654-27111283 27 3.0
11_01_0732 + 6065852-6066531,6067066-6067141,6067231-6067357,606... 27 4.0
05_01_0354 + 2770515-2770655,2770767-2771380,2772152-2772341,277... 27 4.0
03_02_0277 + 7056341-7056391,7056681-7056764,7057107-7057223,705... 27 4.0
12_01_1065 + 10983528-10983992,10985240-10985293 26 5.2
11_02_0143 - 8758198-8758338,8758799-8758906,8759150-8759189,875... 26 5.2
11_02_0095 + 8252680-8253008,8253460-8253527,8254575-8254720,825... 26 5.2
08_02_0462 + 17444726-17445135,17445271-17445546,17446523-17448461 26 5.2
08_02_0168 - 13640894-13641973 26 5.2
07_03_0615 + 19983003-19983238,19983297-19983558,19983651-199839... 26 5.2
05_03_0529 + 15048063-15048105,15048146-15048246,15051715-150522... 26 5.2
05_01_0141 - 937428-937717,938483-938705 26 5.2
03_02_0719 + 10654842-10654977,10655039-10655124,10655226-106570... 26 5.2
01_01_0793 - 6182125-6182625 26 5.2
11_02_0103 - 8320207-8320443,8320540-8320593,8321055-8321162,832... 26 6.9
08_01_0695 + 6148873-6150051 26 6.9
03_04_0053 + 16873735-16873927,16874011-16874162,16874286-168743... 26 6.9
01_01_1168 - 9305084-9307172,9307751-9308460,9308624-9308821 26 6.9
10_08_1046 + 22542074-22544749,22544837-22545544 25 9.2
09_04_0258 - 16175258-16176069,16176111-16176414 25 9.2
09_02_0223 + 5977138-5977459,5979842-5980842 25 9.2
05_01_0214 - 1615519-1616775 25 9.2
04_03_0548 - 17035394-17035749,17035761-17036295,17036325-170364... 25 9.2
03_04_0162 + 17858802-17861168 25 9.2
02_05_0272 - 27348537-27348728,27349035-27349192,27349292-273493... 25 9.2
02_02_0398 - 9777596-9778146,9778229-9778400,9778522-9778639,977... 25 9.2
01_05_0107 + 18172644-18172974,18173162-18173985 25 9.2
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 98.3 bits (234), Expect = 1e-21
Identities = 43/72 (59%), Positives = 56/72 (77%)
Frame = -2
Query: 307 RNLGRVGTIVSRERHPGSFDIVHIKDSTGHTLAMRLNNVFIIGKGTKAYISLPRGKGIRL 128
RN GRVG I +RE+H GSF+ +H++D+ GH A RL NVF IGKG K ++SLP+GKGI+L
Sbjct: 187 RNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPKGKGIKL 246
Query: 127 TIAEERDKRIAA 92
+I EE+ KR AA
Sbjct: 247 SIIEEQRKRDAA 258
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 97.9 bits (233), Expect = 1e-21
Identities = 43/72 (59%), Positives = 56/72 (77%)
Frame = -2
Query: 307 RNLGRVGTIVSRERHPGSFDIVHIKDSTGHTLAMRLNNVFIIGKGTKAYISLPRGKGIRL 128
RN GRVG I +RE+H GSF+ +H++D+ GH A RL NVF IGKG K ++SLP+GKGI+L
Sbjct: 187 RNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKL 246
Query: 127 TIAEERDKRIAA 92
+I EE+ KR AA
Sbjct: 247 SIIEEQRKRDAA 258
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 92.3 bits (219), Expect = 7e-20
Identities = 41/71 (57%), Positives = 53/71 (74%)
Frame = -2
Query: 307 RNLGRVGTIVSRERHPGSFDIVHIKDSTGHTLAMRLNNVFIIGKGTKAYISLPRGKGIRL 128
RN GRVG I SRE+H GSF+ +H++D+ GH A R+ NVF IGK K ++SLP+GKGI+L
Sbjct: 203 RNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKL 262
Query: 127 TIAEERDKRIA 95
+I EE KR A
Sbjct: 263 SIIEEARKRNA 273
>07_03_1757 +
29250163-29250349,29250612-29250813,29250898-29251008,
29251112-29251160,29251247-29251353,29251439-29251942,
29252486-29252614,29252865-29253161,29253274-29253720,
29253828-29253893,29254109-29254169,29254314-29254463,
29254555-29254689,29254791-29254818,29255430-29255479
Length = 840
Score = 30.3 bits (65), Expect = 0.32
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 186 MNTLFNLMAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLR 308
+N +F L V L+CT+ GC + +VP P++R
Sbjct: 213 LNAIFELFVWVNDSTVLVCTIPSSRGCPPKKPLVPFGPRIR 253
>12_02_0735 - 22636835-22639502,22639755-22640734
Length = 1215
Score = 29.9 bits (64), Expect = 0.43
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 174 PLPIMNTLFNLMAKVCPVESLMCTMSKEPGCL 269
PL NT+ +++A PVE L C +S + G L
Sbjct: 425 PLVTANTILSILAADYPVEKLACYLSDDGGAL 456
>06_01_0083 - 659510-661267,661577-662384,662700-663646
Length = 1170
Score = 29.5 bits (63), Expect = 0.56
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 174 PLPIMNTLFNLMAKVCPVESLMCTMSKEPGCL 269
PL NT+ +++A PVE L C +S + G L
Sbjct: 414 PLVTANTILSILAADYPVEKLSCYVSDDGGAL 445
>05_02_0043 +
5964749-5966406,5966725-5966791,5967174-5967329,
5967782-5967865,5968020-5968073
Length = 672
Score = 28.7 bits (61), Expect = 0.98
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = -1
Query: 248 HCAHQGLHGTHLGHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRS 93
H H G H H +H E +L +++ GH P+ R A Q H +
Sbjct: 325 HHGHTGHHIRHFLQLGWDYLHLTYKQEAANLGSSQNGHFPYRWRRASQYHEA 376
>04_01_0492 +
6476586-6476873,6477414-6477686,6477769-6477948,
6478436-6478696,6479171-6479303,6479404-6479494,
6479921-6480023,6480557-6480660,6480809-6480902,
6480985-6481140,6481224-6481286,6481388-6481453,
6481670-6481870,6481999-6482076,6482165-6482284,
6482382-6482462,6482548-6482633,6482920-6483031,
6483093-6483170,6483306-6483482
Length = 914
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 152 AARQGHPPHHRRGAG 108
AAR+GHPP H G G
Sbjct: 4 AARRGHPPPHENGVG 18
>08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378
Length = 477
Score = 27.9 bits (59), Expect = 1.7
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = -1
Query: 275 PRETSRLL*HCAHQGLHGTHLGHEVEQRVHNRQGHEGVHLAAARQG--HPPHHRRGAGQA 102
P +RL H G HG G E + GH H G P HH RG GQA
Sbjct: 15 PEAHARLPRHAPPAGGHGRG-GRGQEGPIAIAAGHGRGHRGGGHGGPASPRHHLRGRGQA 73
>05_03_0323 - 12424243-12424776
Length = 177
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 152 QRDVRLRALADYEHVVQPHGQGVSRGVLDVHNVKGAGMSLAGHD-GAHTPQV 304
QR+ + R H ++PHG+G G N +G G + GH GAH V
Sbjct: 110 QREAQQRHNIAAAHAMRPHGRGRGNG----GNGRGRGSAGRGHAIGAHEDDV 157
>04_04_0946 - 29579779-29580004,29580098-29580210
Length = 112
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = -1
Query: 206 EVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAV 75
EV++ H R+ H + R+ H HH + Q R A+
Sbjct: 54 EVDRAKHRRKKRAAAHAVSVRKEHRNHHHHHRHHHQQPQPRPAI 97
>02_05_0101 -
25824093-25824112,25824734-25824842,25824927-25826429,
25826596-25827333,25827712-25827919,25828455-25830409,
25830868-25830960,25831044-25831100,25831189-25831272,
25831345-25831437,25831622-25832053,25833593-25833933,
25834663-25835215
Length = 2061
Score = 27.5 bits (58), Expect = 2.3
Identities = 8/35 (22%), Positives = 21/35 (60%)
Frame = +3
Query: 156 EMYAFVPLPIMNTLFNLMAKVCPVESLMCTMSKEP 260
+ + +P PI+N + ++V P++ ++C++ P
Sbjct: 781 DTFRSLPTPILNDDIAVRSRVPPIQEILCSLKPHP 815
>01_06_1755 - 39673030-39673338
Length = 102
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -1
Query: 248 HCAHQGLHGTHLGHEVEQRVHNRQGHEGV-HLAAARQGHPPHHRRGAGQAH 99
HCA + H G E R+ +E V +A A +GH HH G G H
Sbjct: 10 HCAEEMNRPPHAGGE--HYAVRRESYEEVDEMARAGRGH--HHGNGGGGGH 56
>12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753
Length = 375
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 215 LGHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 117
+ HE+ Q +H+ Q + + GH HHRR
Sbjct: 234 ISHEL-QHIHHHQQQQFYYHEVVHDGHGHHHRR 265
>12_01_0798 +
7314885-7314953,7315324-7315387,7315489-7315677,
7316430-7316625,7316727-7316953,7317177-7318134,
7320104-7321307,7321517-7321876,7321965-7323195,
7323334-7323599,7323738-7326335
Length = 2453
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = -2
Query: 298 GRVGTI-VSRERHPG--SFDIVHIKDSTGHTLAMRLNNVFIIGKGTKAYISLPRG 143
G++G + + +RHP SFDI+HI + T++++ + + GK + + L G
Sbjct: 593 GKIGALNLLFKRHPYTISFDILHILSAIPETVSVQSYSQLLPGKSPPSVVILRDG 647
>04_04_0669 + 27110654-27111283
Length = 209
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = +2
Query: 149 RQRDVRLRALADYEH-----VVQPHGQGVSRGVLDVHNVKGAGMSLAGHD 283
R+R V+ AL D E VV PH R ++GAG +L G D
Sbjct: 143 RRRGVQHEALNDEEDDDDELVVPPHEMAARRAAAAASVMEGAGRTLKGRD 192
>11_01_0732 +
6065852-6066531,6067066-6067141,6067231-6067357,
6068084-6068289
Length = 362
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 173 HEGVHLAAARQGHPPHHRRGAGQAHRSQ 90
+ G H AR PHHR G G H +
Sbjct: 28 YAGDHGPIARPQGAPHHRHGHGHGHHQR 55
>05_01_0354 +
2770515-2770655,2770767-2771380,2772152-2772341,
2772570-2772634,2772719-2773214
Length = 501
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 130 GGCPCRAAARCTPSCPCR 183
G P RAA RC PS CR
Sbjct: 77 GRPPARAAFRCAPSLTCR 94
>03_02_0277 +
7056341-7056391,7056681-7056764,7057107-7057223,
7057335-7057772,7057889-7058295,7058371-7058470,
7058707-7058793,7059056-7059544
Length = 590
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 223 PWSP*CAQCQRSRDVSRGTRWCPHAPSY 306
P P Q RSR G W PH P++
Sbjct: 542 PLRPAAQQAARSRGGGGGVEWRPHNPAF 569
>12_01_1065 + 10983528-10983992,10985240-10985293
Length = 172
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = -1
Query: 188 HNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAVGL 69
H ++ A HH + +HRS G AVGL
Sbjct: 57 HTSSATSSLNAAGDNSADRVHHTQDTPVSHRSAGNHAVGL 96
>11_02_0143 -
8758198-8758338,8758799-8758906,8759150-8759189,
8759396-8759637,8761057-8761281
Length = 251
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 167 GVHLAAARQ--GHPPHHRRGAGQAHRSQGRRAVG 72
G LA AR+ G P R GAGQ + G+R VG
Sbjct: 10 GRRLAIARRAGGVGPRGRAGAGQGCMATGQRRVG 43
>11_02_0095 +
8252680-8253008,8253460-8253527,8254575-8254720,
8254829-8254915,8254964-8255071,8255532-8255585,
8255668-8255904
Length = 342
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 167 GVHLAAARQ--GHPPHHRRGAGQAHRSQGRRAVG 72
G LA AR+ G P R GAGQ + G+R VG
Sbjct: 27 GRRLAIARRAGGVGPRGRAGAGQGCMATGQRRVG 60
>08_02_0462 + 17444726-17445135,17445271-17445546,17446523-17448461
Length = 874
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 45 IVLNVYCP*PYCAATLAAMRLSRSSAMVRRMPLPRGS 155
I+ N+Y P P+C A L L S + + R+P GS
Sbjct: 687 ILGNIYLPDPWCPAPLKLEGLDISGSPMPRVPTWIGS 723
>08_02_0168 - 13640894-13641973
Length = 359
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 173 ALADYEHVVQPHGQGVSRGVLDVHNVKGAGMSLAGHDGAHTP 298
A + H GQG + V V ++ GM L DG+ TP
Sbjct: 27 ATGEGSHGAGQDGQGANARVSGVSLIQWIGMKLDSFDGSGTP 68
>07_03_0615 +
19983003-19983238,19983297-19983558,19983651-19983906,
19983982-19984044,19984131-19984570
Length = 418
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 87 TLAAMRLSRSSAMVRRMPLPRGSEMYAFVPLP 182
T A ++R+ A V+R P+P G A VP P
Sbjct: 214 TCRADDVARADAAVQRPPVPTGPRPAAHVPRP 245
>05_03_0529 +
15048063-15048105,15048146-15048246,15051715-15052258,
15052303-15052570,15053510-15053681,15053783-15054059,
15054243-15054310,15054358-15054489,15055129-15055227
Length = 567
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 18 HEVXXXXXXIVLNVYCP*PYCAATLAAMRLSRSSAMVRRMPLPRGSEMYAFV 173
+E+ L+ Y P P + L + M R+MPLPRG + A V
Sbjct: 415 NEIVRDQEACFLSFYHPTPIPSHVLNMLHWCFGIDMERKMPLPRGIQHNAMV 466
>05_01_0141 - 937428-937717,938483-938705
Length = 170
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 248 HCAHQGLHGTHLGHEVEQRVHNRQGHEGVHLAAARQGHPPHH 123
H H GL G H GH GH G L G HH
Sbjct: 124 HGHHGGLFGGHHGHHGGGLFGGHHGHHG-GLFGGHHGFGGHH 164
>03_02_0719 +
10654842-10654977,10655039-10655124,10655226-10657001,
10657782-10657926,10658017-10658735
Length = 953
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 66 P*PYCAATLAAMRLSRSSAMVRRMPLPRGSEMYAFVP 176
P PYC R R S ++R P GS+ +++VP
Sbjct: 127 PEPYCTP-FRDTRSFRDSQSLKRSPEYSGSDQFSYVP 162
>01_01_0793 - 6182125-6182625
Length = 166
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 157 RCTPSCPCRL*TRCSTSWPRCVPWSP*C 240
R P CP RC +W R P P C
Sbjct: 115 RALPCCPHAFHARCVDAWLRLRPTCPLC 142
>11_02_0103 -
8320207-8320443,8320540-8320593,8321055-8321162,
8321406-8321551,8321697-8321892,8323312-8323533
Length = 320
Score = 25.8 bits (54), Expect = 6.9
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 167 GVHLAAARQ--GHPPHHRRGAGQAHRSQGRRAVG 72
G LA AR+ G P R GAGQ + G+R VG
Sbjct: 10 GRRLAIARRAGGVGPRGRAGAGQGCMATGQRHVG 43
>08_01_0695 + 6148873-6150051
Length = 392
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/14 (71%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
Frame = +1
Query: 136 CP-CRAAARCTPSC 174
CP CRAA C+PSC
Sbjct: 64 CPSCRAAGFCSPSC 77
>03_04_0053 +
16873735-16873927,16874011-16874162,16874286-16874380,
16874704-16874818,16875054-16875343,16875436-16875585,
16876478-16876598,16876671-16876942,16877466-16877937
Length = 619
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 167 GVHLAAARQGHPPHHRRGAGQAHRSQGRRAVGLRTIN 57
G H AA + PHH + H ++GR + ++ N
Sbjct: 17 GAHAAAHPRTRTPHHHCSPQRTHDARGRCRLTAKSAN 53
>01_01_1168 - 9305084-9307172,9307751-9308460,9308624-9308821
Length = 998
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 185 NRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAVGL 69
++ GH+ H GH R AH SQG++A G+
Sbjct: 554 SKHGHQQ-HAMMVAAGHDKIRRLSVHGAHTSQGKQAGGV 591
>10_08_1046 + 22542074-22544749,22544837-22545544
Length = 1127
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 189 NTLFNLMAKVCPVESLMCTMSKEPGCL 269
NT+ +++A PV+ L C +S + G L
Sbjct: 370 NTILSILAADYPVDKLACYVSDDGGAL 396
>09_04_0258 - 16175258-16176069,16176111-16176414
Length = 371
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -1
Query: 191 VHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAVG 72
V++ EG A QG HRRG G+A + + G
Sbjct: 110 VYSDHPEEGEFGRGAAQGEDGEHRRGRGEAGAPEAEQPRG 149
>09_02_0223 + 5977138-5977459,5979842-5980842
Length = 440
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -1
Query: 173 HEGVHLAAARQGHPPHHRRGAGQAHR 96
H AAA G HH G G+ H+
Sbjct: 5 HHHPDAAAAAAGKGAHHHHGGGKVHK 30
>05_01_0214 - 1615519-1616775
Length = 418
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = -1
Query: 227 HGTHLGHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQA 102
HG GH + H H+ H GH HH G G +
Sbjct: 190 HGHGHGHSHDHD-HGGSDHDHHHHEDQEHGHVHHHEDGHGNS 230
>04_03_0548 -
17035394-17035749,17035761-17036295,17036325-17036458,
17037053-17037134
Length = 368
Score = 25.4 bits (53), Expect = 9.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 67 LNPTARRPWLRCACPAPR 120
+ P+ RPW +C C A R
Sbjct: 300 IRPSRLRPWSKCKCHAQR 317
>03_04_0162 + 17858802-17861168
Length = 788
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 109 PAPRRW*GGCPCRAAARC 162
P P RW G C A RC
Sbjct: 190 PPPARWRGSCAVAATRRC 207
>02_05_0272 -
27348537-27348728,27349035-27349192,27349292-27349323,
27349420-27349514,27349614-27349687,27349800-27349878,
27350015-27350078,27350156-27350218,27350300-27350442,
27350566-27350703,27350792-27350913,27350993-27351158,
27351276-27351398,27351609-27351680,27351773-27351880,
27352481-27352597,27352727-27352865,27352974-27353080,
27353167-27353276,27353892-27354025,27354106-27354255,
27354329-27354549,27354647-27355318
Length = 1092
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 179 QGHEGVHLAAARQGHPPHHRRGAG 108
Q HE RQG P HR G+G
Sbjct: 88 QAHEYYGRGVQRQGGMPQHRSGSG 111
>02_02_0398 -
9777596-9778146,9778229-9778400,9778522-9778639,
9778751-9779014,9779287-9779354,9779520-9780145,
9780257-9780412,9780528-9780625,9780741-9780832,
9780940-9781011
Length = 738
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 109 PAPRRW*GGCPCRAAARCTPSC 174
P P RW G C AA T C
Sbjct: 155 PVPARWKGKCQTGAAFNATTGC 176
>01_05_0107 + 18172644-18172974,18173162-18173985
Length = 384
Score = 25.4 bits (53), Expect = 9.2
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 210 AKVCPVESLMCTMSKEPGC 266
A+ P + +CTM+ PGC
Sbjct: 93 ARFAPTAATLCTMALRPGC 111
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,012,176
Number of Sequences: 37544
Number of extensions: 195575
Number of successful extensions: 794
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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