Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5265
         (770 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001428-1|AAN71183.1|  920|Drosophila melanogaster GH16009p pro...    29   9.3  
AE014297-2148|AAN13696.2|  920|Drosophila melanogaster CG31045-P...    29   9.3  

>BT001428-1|AAN71183.1|  920|Drosophila melanogaster GH16009p
           protein.
          Length = 920

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = +1

Query: 268 CNYCCMRIVM---SVILQIFKRKDVLSASHILESLSFCR 375
           C   C+RI++    V+ ++  ++DVL +  I++  +FCR
Sbjct: 54  CAIACVRIILFRSGVLSELEAKRDVLLSDRIIQLQAFCR 92


>AE014297-2148|AAN13696.2|  920|Drosophila melanogaster CG31045-PC,
           isoform C protein.
          Length = 920

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = +1

Query: 268 CNYCCMRIVM---SVILQIFKRKDVLSASHILESLSFCR 375
           C   C+RI++    V+ ++  ++DVL +  I++  +FCR
Sbjct: 54  CAIACVRIILFRSGVLSELEAKRDVLLSDRIIQLQAFCR 92


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,142,823
Number of Sequences: 53049
Number of extensions: 583413
Number of successful extensions: 1467
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)