Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5264
(765 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1755 - 39673030-39673338 40 0.002
09_02_0502 + 9970516-9971028 38 0.012
02_02_0317 + 8893593-8894207 34 0.11
01_06_0328 + 28507942-28508610,28509669-28510826 31 0.76
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 31 1.3
02_02_0454 + 10436491-10436820,10437487-10437570,10437667-104377... 31 1.3
01_06_0332 + 28522797-28523536,28525035-28525067,28525956-285269... 31 1.3
12_01_0527 - 4177928-4178235,4178849-4181438 30 1.8
10_07_0024 - 11964126-11964542,11965235-11966176,11966245-119662... 30 1.8
09_04_0373 - 17037945-17040641 30 1.8
11_04_0321 - 16359390-16359539,16359674-16359746,16360448-163608... 30 2.3
08_01_0392 - 3454224-3454325,3454926-3455035,3455496-3455609,345... 29 4.1
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 29 4.1
09_01_0004 - 133130-133897 29 5.4
05_01_0247 - 1844275-1844514,1847822-1848140,1848219-1848348,184... 29 5.4
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75... 29 5.4
12_01_0863 - 8179535-8179774,8180301-8180364,8180505-8180896 28 7.1
06_01_0623 + 4536817-4536868,4537129-4537328,4537401-4537609,453... 28 9.4
01_01_0242 + 1997427-1997429,1997893-1998580,2000199-2000234,200... 28 9.4
>01_06_1755 - 39673030-39673338
Length = 102
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 435 AGNRHQHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQHVT 611
AG H H G GH + +G+RH D G+R +H G+ H+HG G ++ T
Sbjct: 42 AGRGHHHGNGGGGGH--LGYSGSRHGDAHLGGHREEH-LVHGDEHRHGHGGGRQYDSCT 97
>09_02_0502 + 9970516-9971028
Length = 170
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 600 DDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGCQRMSHLDDRCRRLSHADD 445
DDG R+ ++G ++ + DDG R+ + DDG R+ DD + H DD
Sbjct: 14 DDGGGRIHRHENGGGRIRYCDDGGGRICHPDDGGDRIHRRDDGGGWIRHRDD 65
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -1
Query: 570 DDGCQQLSHADDGCQRLSYLDDGCQRMSHLDDRCRRLSHADDG 442
DDG ++ ++G R+ Y DDG R+ H DD R+ DDG
Sbjct: 14 DDGGGRIHRHENGGGRIRYCDDGGGRICHPDDGGDRIHRRDDG 56
Score = 34.7 bits (76), Expect = 0.082
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -1
Query: 636 RPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDD 505
R E+G + + DDG R+ H DDG ++ DDG + + DD
Sbjct: 22 RHENGGGRIRYCDDGGGRICHPDDGGDRIHRRDDGGGWIRHRDD 65
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 540 DDGCQRLSYLDDGCQRMSHLDDRCRRLSHADDGCQRLSDR 421
DDG R+ ++G R+ + DD R+ H DDG R+ R
Sbjct: 14 DDGGGRIHRHENGGGRIRYCDDGGGRICHPDDGGDRIHRR 53
>02_02_0317 + 8893593-8894207
Length = 204
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 6/64 (9%)
Frame = +2
Query: 437 WQPSSACDNRRQRSSRCDIRWQPSSRYD------SRWQPSSAWDNCWQPSSAWDNRWQPS 598
W+P + + SRC RW+P D + W+ + + S W RW+P
Sbjct: 64 WRPDPVGEAGEESGSRCGRRWRPGGGRDTDPHSPTSWRLDPVGEAGEESGSRWGRRWRPD 123
Query: 599 STCD 610
D
Sbjct: 124 PASD 127
>01_06_0328 + 28507942-28508610,28509669-28510826
Length = 608
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 522 LSYLDDGCQ-RMSHLDDRCRRLSHADDGCQRLSDRGSVVLSTNLESLLITA 373
L YL GC R+ H D + + + C ++SD G L +N ES++ A
Sbjct: 431 LEYLHRGCNTRIVHFDIKPHNILLDQEFCPKISDFGMAKLCSNKESIISIA 481
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +2
Query: 446 SSACDN--RRQRSSRCDIRWQPSSRYDSRWQPSSAWDNCWQPSSAW--DNRWQPSS 601
SS DN R RSS IR PS R SR +PSSA P + W+PS+
Sbjct: 137 SSTVDNTQRSSRSSASPIRLSPSPRSMSRTRPSSAASRSSPPFALQPPTPSWRPST 192
>02_02_0454 +
10436491-10436820,10437487-10437570,10437667-10437797,
10437873-10437948,10438366-10438436,10438559-10438645,
10438725-10438797,10438881-10438948,10439020-10439088,
10439160-10439265,10439831-10439887,10440297-10440389
Length = 414
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = -1
Query: 630 ESGCQMLSHVD----DGCQRLSHADDGCQQLSHADDGCQRLS-YLDDGCQRMS--HLDDR 472
E GC L ++ + CQ++S D G + ++ + LS Y G ++ H+
Sbjct: 137 EMGCTSLQELELLNINACQKVS--DKGIETITSLCPNLRALSIYWIVGLTDLTIRHIVQN 194
Query: 471 CRRLSHAD-DGCQRLSDRGSVVLSTNLESL 385
C+ + + GC+ +SD+G +++ N E L
Sbjct: 195 CKHIVDLNLSGCKNISDKGMQLVADNYEGL 224
>01_06_0332 +
28522797-28523536,28525035-28525067,28525956-28526942,
28527153-28527282
Length = 629
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 522 LSYLDDGCQ-RMSHLDDRCRRLSHADDGCQRLSDRGSVVLSTNLESLLITA 373
L YL GC R+ H D + + + C ++SD G L N ES++ A
Sbjct: 410 LEYLHRGCSTRIVHFDIKPHNILLDQEFCPKISDFGMAKLCANKESIVSIA 460
>12_01_0527 - 4177928-4178235,4178849-4181438
Length = 965
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 450 QHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGT 551
QHV A NG+ D+T+ + + +G R H T
Sbjct: 586 QHVDIATNGNPDLTNGTRNYDNAPTSGKRRTHNT 619
>10_07_0024 -
11964126-11964542,11965235-11966176,11966245-11966291,
11966545-11966602,11968378-11968624,11970207-11970390,
11970410-11970548,11970689-11970796
Length = 713
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 632 RRAAVKCCHMLMTVASGCPMLMTV 561
R V+ C ML T+ SG PML TV
Sbjct: 496 RSLRVRSCRMLRTIESGAPMLATV 519
>09_04_0373 - 17037945-17040641
Length = 898
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -1
Query: 558 QQLSHADDGCQRLSYLDDGC-QRMSHLDDRCRRLSHADDGCQRLSDRGSVVLSTNLESLL 382
+++ A + L+YL GC Q++ H D + + A+ G ++SD G L + +S L
Sbjct: 637 ERMEVAIGAARGLAYLHTGCEQKIVHCDVKPENILLANGGQVKISDFGLAKLMSREQSAL 696
Query: 381 ITAI 370
T +
Sbjct: 697 FTTM 700
>11_04_0321 -
16359390-16359539,16359674-16359746,16360448-16360845,
16360919-16362673,16362751-16362861,16363745-16363962,
16364088-16364196
Length = 937
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = +3
Query: 432 TAGNRHQHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQHVT 611
T N QH T +QDV Q A + +G G++ + AGN QH
Sbjct: 376 THPNSGQH-DTGDKANQDVGCGSTGIQTAAALPSEGFNGDVQGDKSEIKDPAGNTTQHTE 434
Query: 612 TFDSRS 629
TF+ +
Sbjct: 435 TFEQEN 440
>08_01_0392 -
3454224-3454325,3454926-3455035,3455496-3455609,
3455930-3456043,3456474-3456531
Length = 165
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = -2
Query: 593 VASGCP-MLMTVASSCPMLMTVASGCHILMTVASGCHILMTVAGGCHMLMTVASGCRTEA 417
V SGC +LM A + + V S + A G + V GGCH L+ G +
Sbjct: 26 VCSGCRNLLMYPAGATSVCCAVCST--VTAVPAPGTEMAQLVCGGCHTLLMYIRGATSVQ 83
Query: 416 VLFCRRIS 393
C ++
Sbjct: 84 CSCCHTVN 91
>03_05_0640 -
26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 522 AAGNRHQHGTTAGNRHQHGTTAGNRHQHVTTFDSRSPAVPGWGTSRHQPFTD 677
AAG+RH G R ++ H H T FD + A G + + P T+
Sbjct: 157 AAGSRHSFGGEEERRVENPPC--KNHHHATAFDDAASAEADQGAAPYDPRTN 206
>09_01_0004 - 133130-133897
Length = 255
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 389 DSRFVDRTTLPLS-DNRWQPSSACDNRRQRSS-RCDI 493
D R VDR ++ RWQP++A R QR + RCD+
Sbjct: 15 DRRDVDRRGRTVTRKRRWQPAAAGRRRGQRGTRRCDV 51
>05_01_0247 -
1844275-1844514,1847822-1848140,1848219-1848348,
1848706-1848883
Length = 288
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +2
Query: 428 DNRWQPSSACDNRRQRSSRCDIRWQPSSRYDSRWQPSSAWDN--CWQPSSAWDNRW 589
+ RW + C R+ C +RW R D R +A + S W NRW
Sbjct: 49 EGRWNSLARCAGLRRTGKSCRLRWLNYLRPDVRRGNITADEQLLILDLHSRWGNRW 104
>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
752025-753905,754093-754296,754807-754899,755036-755122,
755241-755328,755533-755645,755943-757259,757398-758672,
759166-759273
Length = 2233
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 465 AGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRHQH---GTTAGNRHQHVTTFDSRSPA 635
+G+ Q + + + ++ QHG++ +QH G +G H + DSR
Sbjct: 2050 SGSAAQSTKQSASGQKRRSSTSEAEQHGSSTSRHNQHAPVGEVSGRAHTSKSEKDSRHSG 2109
Query: 636 VPGWGTSRHQPFTD 677
PG SR Q FTD
Sbjct: 2110 -PG---SREQ-FTD 2118
>12_01_0863 - 8179535-8179774,8180301-8180364,8180505-8180896
Length = 231
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 495 AGNRHQDMTAAGNRHQHGTTAGNRHQHGTTA 587
AGNR + + AG+R G G+R + G+ A
Sbjct: 60 AGNRREGRSVAGDRRTDGFIVGDRGEGGSAA 90
>06_01_0623 +
4536817-4536868,4537129-4537328,4537401-4537609,
4538531-4538954
Length = 294
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 450 QHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTA-GNRHQHGTTAG 590
+H T AG GH DV G + +R HG G QHGT G
Sbjct: 225 KHGTCAGTGHTDVAKRGRSWPGV----DRRAHGWCGPGVVTQHGTCTG 268
>01_01_0242 +
1997427-1997429,1997893-1998580,2000199-2000234,
2000786-2001114,2001178-2001855
Length = 577
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 522 LSYLDDGCQ-RMSHLDDRCRRLSHADDGCQRLSDRGSVVLSTNLESLL 382
L YL GC R+ H D + + + D C +++D G L ES L
Sbjct: 397 LEYLHHGCNTRIVHFDIKPQNILLDQDFCPKIADFGLAKLCCTKESKL 444
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,303,448
Number of Sequences: 37544
Number of extensions: 453687
Number of successful extensions: 1419
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1398
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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