Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5264
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016662-1|AAY55863.1| 196|Caenorhabditis elegans Hypothetical ... 33 0.29
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 32 0.51
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 31 0.68
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 31 1.2
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 31 1.2
Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical pr... 30 1.6
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 29 4.8
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 29 4.8
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 4.8
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 29 4.8
AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical ... 29 4.8
Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane... 28 6.3
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 28 6.3
Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical pr... 28 8.4
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 28 8.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.4
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 28 8.4
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 28 8.4
>AF016662-1|AAY55863.1| 196|Caenorhabditis elegans Hypothetical
protein C33C12.11 protein.
Length = 196
Score = 32.7 bits (71), Expect = 0.29
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = -1
Query: 651 SPTRARPESGCQMLSHVDDGC---QRLSHADD----GCQQLSHADDGCQRLSYLDDGCQR 493
SP+ P +GC L+ DD R S + D GC L+H DDG L +
Sbjct: 78 SPSGDSPSAGCCFLARDDDRTLAKSRYSPSGDSPSAGCCFLAHDDDGS-----LAGQLRD 132
Query: 492 MSHLDDRCRRLSHADDG 442
++RC L+H DDG
Sbjct: 133 FFSSENRCPLLAHRDDG 149
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +3
Query: 411 QHCLCPTTAGNRHQHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRHQHGTTAG 590
+H C + RH H G+G + S G RH G+ H G G +HG+ +G
Sbjct: 290 RHGSCSGSPRGRHGHGGHGGHGSRS-GSPGGRHGH---GGSGHHRGGRHGGHGRHGSRSG 345
Query: 591 N---RHQH 605
+ RH H
Sbjct: 346 SPGGRHGH 353
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -2
Query: 647 PPGHGRRAAVKCCHMLMTVAS-GCPMLMTVASSCPMLMTVASGC 519
P GH A CC +S GC + T+ SCP MT + C
Sbjct: 218 PKGHFCTAQKVCCPSTALQSSIGCSTVCTIDESCPKGMTCQNNC 261
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/56 (30%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = +3
Query: 468 GNGHQDVTSAGNRHQDMTAAGN--RHQHGTTAGNRHQHGTTAGNRHQHVTTFDSRS 629
G GH G H G H HG G H HG G H H +++ S
Sbjct: 173 GGGHHGGGGGGGSHHHGGGGGGGGHHHHG---GGGHYHGGGGGFHHHHHSSYSGSS 225
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 426 PTTAGNRHQHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRH---QHGTTAGNR 596
PTTAG T NG TS G H+ TA +GTT Q TTAG R
Sbjct: 374 PTTAG-----WTNGANGTTIDTSRGPTHRPTTAGWRNGANGTTRDTSRGFTQRPTTAGWR 428
Query: 597 H-QHVTTFD-----SRSPAVPGW 647
+ + TT D ++ P GW
Sbjct: 429 NGANGTTIDTSREFTQRPTTAGW 451
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = +3
Query: 426 PTTAGNRHQHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQH 605
PTTAG T NG TS G + A +G T G GTT G H+
Sbjct: 518 PTTAG-----WTNGANGTTSGTSRGFTQRPTIAGWTNGANGITRGQTRVPGTTRGPTHRP 572
Query: 606 VT 611
T
Sbjct: 573 TT 574
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = +3
Query: 426 PTTAGNRHQHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQH 605
PTTAG T NG TS G + A +G T G GTT G H+
Sbjct: 716 PTTAG-----WTNGANGTTSGTSRGFTQRPTIAGWTNGANGITRGQTRVPGTTRGPTHRP 770
Query: 606 VT 611
T
Sbjct: 771 TT 772
Score = 29.1 bits (62), Expect = 3.6
Identities = 28/74 (37%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +3
Query: 426 PTTAGNRHQHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRH---QHGTTAG-N 593
PTTAG T NG TS G H+ TA +GTT Q TTAG
Sbjct: 326 PTTAG-----WTNGANGTTIDTSRGPTHRPTTAGWTNGANGTTIDTSREFTQRPTTAGWT 380
Query: 594 RHQHVTTFD-SRSP 632
+ TT D SR P
Sbjct: 381 NGANGTTIDTSRGP 394
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Frame = +3
Query: 459 TTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRH---QHGTTAG--NRHQHVTTFDS 623
T NG TS G + TA +GTT+G Q TTAG N T+ S
Sbjct: 674 TNGANGTTSGTSRGFTQRPTTAGWTNGANGTTSGTSRGFTQRPTTAGWTNGANGTTSGTS 733
Query: 624 RS----PAVPGW 647
R P + GW
Sbjct: 734 RGFTQRPTIAGW 745
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 459 TTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQHVT 611
T NG TS G + A +G T G GTT G H+ T
Sbjct: 824 TNGANGTTSGTSRGFTQRPTAAGWTIRANGITRGQTRVPGTTRGPTHRPTT 874
>Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical
protein B0198.1 protein.
Length = 279
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = -1
Query: 522 LSYLDDGCQRMSHLDDRCRRLSHADDGCQRLSDRGSVVLSTNLESLLITAIYTYINFYTL 343
L Y QR+ ++ D C + +H GC LSD + + L +Y +NF
Sbjct: 178 LPYAKTVVQRVQYIPDSCCKSTHQRKGC-ALSDSPNNIFYRGCLPFLKEEVYNNLNFLFT 236
Query: 342 IT 337
+T
Sbjct: 237 VT 238
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = +3
Query: 441 NRHQHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRHQHGTTAGN 593
++ Q + G H +S N HQ N H G A H T A N
Sbjct: 469 SQKQQKQSNGKSHHQHSSHQNNHQKSNGNSNGHARGFAAVRDSSHDTNASN 519
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/67 (25%), Positives = 26/67 (38%)
Frame = +3
Query: 411 QHCLCPTTAGNRHQHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRHQHGTTAG 590
Q L TT N++ HV G + GN D + Q G+ N++Q+
Sbjct: 357 QPSLEQTTPMNKYNHVEDDGMNQRPTFYTGNSENDQRQFDGQMQQGSQQNNQNQNQNNRN 416
Query: 591 NRHQHVT 611
R V+
Sbjct: 417 LRKNTVS 423
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/67 (25%), Positives = 26/67 (38%)
Frame = +3
Query: 411 QHCLCPTTAGNRHQHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRHQHGTTAG 590
Q L TT N++ HV G + GN D + Q G+ N++Q+
Sbjct: 357 QPSLEQTTPMNKYNHVEDDGMNQRPTFYTGNSENDQRQFDGQMQQGSQQNNQNQNQNNRN 416
Query: 591 NRHQHVT 611
R V+
Sbjct: 417 LRKNTVS 423
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein
F42C5.10 protein.
Length = 1292
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +3
Query: 441 NRHQHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGN--RHQHGTTAGNRHQH 605
+ H H T G+ H + HQD N HQH T H H T+ N H H
Sbjct: 948 HHHHHYHTDGSEH-----VHHYHQDE----NAHQHSTAENEHIHHYHTTSNENAHHH 995
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Frame = +3
Query: 438 GNRHQHVTTAGNGHQDV--TSAGNRHQDMTAA--GNRHQHGTTAGNRHQHGTTAGNRHQH 605
G+ H + A +GH T G H G H+HG G H H N H H
Sbjct: 656 GHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHH 715
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/67 (25%), Positives = 26/67 (38%)
Frame = +3
Query: 411 QHCLCPTTAGNRHQHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRHQHGTTAG 590
Q L TT N++ HV G + GN D + Q G+ N++Q+
Sbjct: 357 QPSLEQTTPMNKYNHVEDDGMNQRPTFYTGNSENDQRQFDGQMQQGSQQNNQNQNQNNRN 416
Query: 591 NRHQHVT 611
R V+
Sbjct: 417 LRKNTVS 423
>AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical
protein Y42H9AR.1 protein.
Length = 506
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +3
Query: 426 PTTAGNRHQHVTTAGNGHQDVTSAGNRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQH 605
P A + Q + NGH G+ H D G+ H H G+ H H G+ H+H
Sbjct: 284 PPVAATQQQPPVSESNGH------GHSHAD---GGHGHSHDD-GGHGHSHDGGHGHSHEH 333
>Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical
protein T24C2.1 protein.
Length = 711
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 446 SSACDNRRQRSSRCDIRWQPSSRYDSRWQPSSAW 547
S + N+ ++S + PSS YDSR + SSAW
Sbjct: 271 SRSTKNQLEQSGMTTMPGIPSSAYDSRLKISSAW 304
>AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane
protein RAM-5 protein.
Length = 711
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 446 SSACDNRRQRSSRCDIRWQPSSRYDSRWQPSSAW 547
S + N+ ++S + PSS YDSR + SSAW
Sbjct: 271 SRSTKNQLEQSGMTTMPGIPSSAYDSRLKISSAW 304
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 485 CDIRWQPSSRYDSRWQPSSAWDNCWQPSS 571
C I W S Y ++W + D+CW +S
Sbjct: 8 CLIPWVSSKAYCTKWTEIKSGDSCWNIAS 36
>Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical
protein F54C8.2 protein.
Length = 261
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +3
Query: 432 TAGNRHQHVTTAGNGHQDVTSAGNRH----QDMTAAGNRHQHGTTAGNRHQHGTTAG 590
T G+ ++ +G D+ S RH +++TAA + HQ GNR+ T G
Sbjct: 80 TVGSNSTNLVDYSHGRHDMPSH-RRHDSSDEEITAANSHHQSPINVGNRNDTDGTNG 135
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +3
Query: 441 NRHQHVTTAGNGHQDVTSAGNRHQDMTAAGN--RHQHGTTAGNRHQHGTTAGNRHQ 602
+R++H GN HQ+ + + +QD N R++H + NR Q H+
Sbjct: 85 DRNRHRNHDGNRHQNQDRSRHHNQDRNRRQNHDRNRHQSQGRNRQQDHERGDEAHE 140
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +3
Query: 441 NRHQHVTTAGNGHQDVTSAGNRHQDMTAAGN--RHQHGTTAGNRHQHGTTAGNRHQ 602
+R++H GN HQ+ + + +QD N R++H + NR Q H+
Sbjct: 929 DRNRHRNHDGNRHQNQDRSRHHNQDRNRRQNHDRNRHQSQGRNRQQDHERGDEAHE 984
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Frame = +3
Query: 438 GNRHQHVTTA-GNGHQDVTSAGNRHQ-DMTAAGNRHQHGTTAGNR-HQHGTTAGNRHQH 605
G+ H H +GH D + H D + H HG N H H + N H H
Sbjct: 362 GHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHDHGHSHGGNNDNHGHSHSAGSDNHHGH 420
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Frame = +3
Query: 438 GNRHQHVTTA-GNGHQDVTSAGNRHQ-DMTAAGNRHQHGTTAGNR-HQHGTTAGNRHQH 605
G+ H H +GH D + H D + H HG N H H + N H H
Sbjct: 380 GHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHDHGHSHGGNNDNHGHSHSAGSDNHHGH 438
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,506,414
Number of Sequences: 27780
Number of extensions: 397896
Number of successful extensions: 1227
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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