Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5263
         (699 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA ...    31   1.1  
BT024433-1|ABC86495.1|  179|Drosophila melanogaster IP02210p pro...    30   2.6  
BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p pro...    29   6.1  
AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD2333...    29   6.1  
AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB...    29   6.1  
AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA...    29   6.1  
AY061181-1|AAL28729.1|  158|Drosophila melanogaster LD14807p pro...    29   8.0  

>AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA
            protein.
          Length = 1314

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
 Frame = +2

Query: 326  SLPRRKAHPLPGRKENPLPRESARSPT-LPRCQTC--PLPS*RDCQGTSSRTATLPSRKE 496
            +LP  ++    G K  P PR S ++PT LP       P PS R  Q T  R      R  
Sbjct: 865  TLPLSRSRLSAGVKPTPAPRTSLQTPTPLPETTVAKDPTPSKRKSQPTVRREYPSLDRLV 924

Query: 497  GALPSTCPSRQTR 535
             +   T P + +R
Sbjct: 925  ASTTGTIPKKNSR 937


>BT024433-1|ABC86495.1|  179|Drosophila melanogaster IP02210p
           protein.
          Length = 179

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = +1

Query: 484 QSKRRCLTQYMSQSTDPSPSRYMCQNLTPLKRKFMFQSKCTCPASLPSREKSTLPRKRF 660
           + K +C  +   +  DP   +  C+   P K+K   + K  C    P ++K    +KR+
Sbjct: 77  EKKTKCAKKDPCKKKDPCKKKDPCKKKDPCKKKDPCKKKDPCKKKDPCKKKDPCKKKRW 135


>BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p
           protein.
          Length = 1341

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 335 RRKAHPLPGRKENPLPRESARSPTLPRCQ 421
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 295 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 323


>AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD23336
           protein.
          Length = 1239

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 335 RRKAHPLPGRKENPLPRESARSPTLPRCQ 421
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 193 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 221


>AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB,
           isoform B protein.
          Length = 1296

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 335 RRKAHPLPGRKENPLPRESARSPTLPRCQ 421
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 250 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 278


>AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA,
           isoform A protein.
          Length = 1341

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 335 RRKAHPLPGRKENPLPRESARSPTLPRCQ 421
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 295 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 323


>AY061181-1|AAL28729.1|  158|Drosophila melanogaster LD14807p
           protein.
          Length = 158

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = +2

Query: 332 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPS 511
           PRR+   +P +  + LPR    + T PR +  P    R  Q    +   L  R++  LP+
Sbjct: 10  PRRQLQQMPRQLGHLLPRRQLPAMTAPRKKRRPR---RQLQQRPRQLRQLLPRRQ--LPA 64

Query: 512 -TCPSRQTRPRQGICARTLPR*KESSCSSRSA 604
            T P ++ RPR+    +   R K  S  +++A
Sbjct: 65  MTAPRKKRRPRRLPPQQRRHRPKRPSLQAKTA 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,780,611
Number of Sequences: 53049
Number of extensions: 454698
Number of successful extensions: 1665
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1544
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)