Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5257
         (407 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ231608-1|ABA71714.1|  415|Drosophila melanogaster male accesso...    29   2.4  
AE014134-758|ABI31286.1|  415|Drosophila melanogaster CG34102-PA...    29   2.4  
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm...    28   5.4  
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P...    28   5.4  
J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid pr...    27   7.2  
AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p pro...    27   7.2  
AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA...    27   7.2  
AY508412-1|AAS91579.1|  452|Drosophila melanogaster mitochondria...    27   9.5  
AY060616-1|AAL28164.1|  452|Drosophila melanogaster GH04071p pro...    27   9.5  
AE014297-1076|AAF54482.2|  452|Drosophila melanogaster CG3910-PA...    27   9.5  

>DQ231608-1|ABA71714.1|  415|Drosophila melanogaster male accessory
           gland protein protein.
          Length = 415

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -1

Query: 284 GSCSPTGFPPGIPLPTAFLGRQTRHPVV 201
           GS  P+  PPG+P P ++   ++ +P+V
Sbjct: 319 GSLGPSQLPPGLPAPPSWSSLESSNPLV 346


>AE014134-758|ABI31286.1|  415|Drosophila melanogaster CG34102-PA
           protein.
          Length = 415

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -1

Query: 284 GSCSPTGFPPGIPLPTAFLGRQTRHPVV 201
           GS  P+  PPG+P P ++   ++ +P+V
Sbjct: 319 GSLGPSQLPPGLPAPPSWSSLESSNPLV 346


>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
           transmembrane protein protein.
          Length = 3004

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +1

Query: 16  GEVDLSRAKQCCD*GLSEMRCLIAICFIVLARH--CESGALKCSPGTEG 156
           G  DL   +  C+   +   C  A+C +   R+  CESG  +C+ G  G
Sbjct: 701 GTYDLETGQCVCERHWTGPDCSQAVCSLDCGRNGVCESGKCRCNSGWTG 749


>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
           protein.
          Length = 3004

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +1

Query: 16  GEVDLSRAKQCCD*GLSEMRCLIAICFIVLARH--CESGALKCSPGTEG 156
           G  DL   +  C+   +   C  A+C +   R+  CESG  +C+ G  G
Sbjct: 701 GTYDLETGQCVCERHWTGPDCSQAVCSLDCGRNGVCESGKCRCNSGWTG 749


>J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid
           protein protein.
          Length = 846

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +1

Query: 115 CESGALKCSPGTEGPCAXEQESKD 186
           CE G  KC PG  G     QES D
Sbjct: 622 CECGRCKCKPGWTGSNCGCQESND 645


>AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p
           protein.
          Length = 846

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +1

Query: 115 CESGALKCSPGTEGPCAXEQESKD 186
           CE G  KC PG  G     QES D
Sbjct: 622 CECGRCKCKPGWTGSNCGCQESND 645


>AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA
           protein.
          Length = 846

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +1

Query: 115 CESGALKCSPGTEGPCAXEQESKD 186
           CE G  KC PG  G     QES D
Sbjct: 622 CECGRCKCKPGWTGSNCGCQESND 645


>AY508412-1|AAS91579.1|  452|Drosophila melanogaster mitochondrial
           transcription factorB2 protein.
          Length = 452

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 344 ITAVLPQALGGLLNQSTCRSGSCSPTGFPPGIPLPTAF 231
           +T + P  L   L Q +C+S + S   + PGI + T F
Sbjct: 331 VTPIYPDELPKKLPQYSCQSTTMSTRNYYPGINIYTQF 368


>AY060616-1|AAL28164.1|  452|Drosophila melanogaster GH04071p
           protein.
          Length = 452

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 344 ITAVLPQALGGLLNQSTCRSGSCSPTGFPPGIPLPTAF 231
           +T + P  L   L Q +C+S + S   + PGI + T F
Sbjct: 331 VTPIYPDELPKKLPQYSCQSTTMSTRNYYPGINIYTQF 368


>AE014297-1076|AAF54482.2|  452|Drosophila melanogaster CG3910-PA
           protein.
          Length = 452

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 344 ITAVLPQALGGLLNQSTCRSGSCSPTGFPPGIPLPTAF 231
           +T + P  L   L Q +C+S + S   + PGI + T F
Sbjct: 331 VTPIYPDELPKKLPQYSCQSTTMSTRNYYPGINIYTQF 368


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,821,701
Number of Sequences: 53049
Number of extensions: 483169
Number of successful extensions: 1500
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)