Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5257
(407 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97193-6|AAV34803.1| 780|Caenorhabditis elegans Hypothetical pr... 29 0.98
U97193-5|AAV34804.1| 783|Caenorhabditis elegans Hypothetical pr... 29 0.98
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 2.3
U43283-3|AAC69024.2| 880|Caenorhabditis elegans Hypothetical pr... 28 3.0
AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cycl... 28 3.0
AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor typ... 28 3.0
AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical ... 27 3.9
Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical pr... 26 9.1
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 26 9.1
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 26 9.1
>U97193-6|AAV34803.1| 780|Caenorhabditis elegans Hypothetical
protein C06A5.3a protein.
Length = 780
Score = 29.5 bits (63), Expect = 0.98
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +3
Query: 114 LRKWSPKMQSWHRRPMCXRARIKRQTXSDNNRMTRLPSKKCSRKWNAW 257
+ K P S HR + +++ Q N R KKC RKW W
Sbjct: 486 VEKTPPISASGHRHCVNCNGQVRPQMCGGNRHRWRCVDKKC-RKWYGW 532
>U97193-5|AAV34804.1| 783|Caenorhabditis elegans Hypothetical
protein C06A5.3b protein.
Length = 783
Score = 29.5 bits (63), Expect = 0.98
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +3
Query: 114 LRKWSPKMQSWHRRPMCXRARIKRQTXSDNNRMTRLPSKKCSRKWNAW 257
+ K P S HR + +++ Q N R KKC RKW W
Sbjct: 489 VEKTPPISASGHRHCVNCNGQVRPQMCGGNRHRWRCVDKKC-RKWYGW 535
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 275 SPTGFPPGIPLPTAFLGRQTRHP 207
+P G+PPG P P F +HP
Sbjct: 754 APYGYPPGAPPPAGFHPSHPQHP 776
>U43283-3|AAC69024.2| 880|Caenorhabditis elegans Hypothetical
protein T25G12.6 protein.
Length = 880
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -1
Query: 347 LITAVLPQALGGLLNQSTCRSGSCSPTGFPPGIPLPTAFLGRQTRHPV 204
LIT P + + C S PT P +P T + R+T+ PV
Sbjct: 202 LITTSGPSGTTVTVPTTPCASVPTGPTKTPVTVPTSTGSVSRETKSPV 249
>AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cyclase
protein 23 protein.
Length = 1043
Score = 27.9 bits (59), Expect = 3.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 79 LIAICFIVLARHCESGALKCSP 144
L+ ICF +L+R CE+ AL +P
Sbjct: 441 LLIICFFILSRVCENRALANTP 462
>AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1073
Score = 27.9 bits (59), Expect = 3.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 79 LIAICFIVLARHCESGALKCSP 144
L+ ICF +L+R CE+ AL +P
Sbjct: 471 LLIICFFILSRVCENRALANTP 492
>AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical
protein Y46H3D.8 protein.
Length = 247
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 258 ARHSTSDCISWTADASSCC 202
A S+S C S+TAD+SS C
Sbjct: 199 ASSSSSSCTSYTADSSSAC 217
>Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical
protein ZK669.5a protein.
Length = 212
Score = 26.2 bits (55), Expect = 9.1
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +3
Query: 171 ARIKRQTXSDNNRMTRLPSKKCSRKWNAWREPSGRATATSAGAL 302
A ++Q+ S N+ T PS AW EP AT TSA AL
Sbjct: 165 ANERKQSSSVNSTSTSPPSTTVE----AWVEPVPTATTTSAPAL 204
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 374 QRTGSVKYNLITAVLPQALGGLLNQSTCRSGSCSP 270
Q+T + YN T PQ + +L S +S C+P
Sbjct: 275 QQTAAPIYNPTTTSAPQVVQIVLQASVAQSSQCAP 309
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 374 QRTGSVKYNLITAVLPQALGGLLNQSTCRSGSCSP 270
Q+T + YN T PQ + +L S +S C+P
Sbjct: 275 QQTAAPIYNPTTTSAPQVVQIVLQASVAQSSQCAP 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,815,462
Number of Sequences: 27780
Number of extensions: 232456
Number of successful extensions: 625
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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