Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5256
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40797-3|AAB37550.2| 238|Caenorhabditis elegans Saposin-like pr... 37 0.008
U40797-2|AAB37549.2| 429|Caenorhabditis elegans Saposin-like pr... 37 0.008
AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like ... 32 0.28
Z81544-9|CAI79252.1| 231|Caenorhabditis elegans Hypothetical pr... 31 0.49
AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride ... 29 2.0
Z81553-8|CAB04497.1| 408|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL117204-25|CAB55139.2| 528|Caenorhabditis elegans Hypothetical... 28 3.5
AL117204-15|CAB55129.1| 521|Caenorhabditis elegans Hypothetical... 28 3.5
Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical pr... 28 4.6
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 28 4.6
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 28 4.6
U40797-5|AAB37548.1| 402|Caenorhabditis elegans Saposin-like pr... 28 4.6
AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical ... 28 4.6
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 27 6.1
Z92793-2|CAD56589.1| 684|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z92793-1|CAB07229.1| 681|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z72503-11|CAD56560.1| 684|Caenorhabditis elegans Hypothetical p... 27 8.0
Z72503-10|CAA96601.1| 681|Caenorhabditis elegans Hypothetical p... 27 8.0
U41012-4|AAA82296.2| 413|Caenorhabditis elegans Hypothetical pr... 27 8.0
U40417-4|AAM69087.1| 100|Caenorhabditis elegans Saposin-like pr... 27 8.0
>U40797-3|AAB37550.2| 238|Caenorhabditis elegans Saposin-like
protein family protein10, isoform a protein.
Length = 238
Score = 37.1 bits (82), Expect = 0.008
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +3
Query: 15 VPCEFCEQLVKHLRDVLVANTTELEFYKVL-QGLCKQTGKFKDECLHLAEQYYPVIYNFL 191
+ C+ C+ +VK L+ V+ ++ E L + +CK G+++ C + ++Y P L
Sbjct: 137 IVCDECQFVVKELKTVVEDKKSQAEARDFLRENVCKSLGQYRGFCDLVVDEYLPQFIQEL 196
Query: 192 VSDLK-PAETCKMIGICGNLTSAPISPLVARELV 290
+ L+ P + C I C SA L AR+ V
Sbjct: 197 DAILQDPHQVCVDIKAC---NSASAQGLKARKYV 227
Score = 33.9 bits (74), Expect = 0.070
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 21 CEFCEQLVKHLRDVLVANTTELEFYKVLQG-LCKQTGKFKDECLHLAEQYYPVIYNFLVS 197
CE CE ++K + + + ++E K++ G +C++T + DEC Q I
Sbjct: 38 CEECENVIKRISEA-AKDPKKIEELKIVLGMMCRET-SYADECRLFVSQLDKFIDKLQPF 95
Query: 198 DLKPAETCKMIGICGN 245
P C + IC N
Sbjct: 96 LKNPHAVCTRLHICSN 111
>U40797-2|AAB37549.2| 429|Caenorhabditis elegans Saposin-like
protein family protein10, isoform b protein.
Length = 429
Score = 37.1 bits (82), Expect = 0.008
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +3
Query: 15 VPCEFCEQLVKHLRDVLVANTTELEFYKVL-QGLCKQTGKFKDECLHLAEQYYPVIYNFL 191
+ C+ C+ +VK L+ V+ ++ E L + +CK G+++ C + ++Y P L
Sbjct: 137 IVCDECQFVVKELKTVVEDKKSQAEARDFLRENVCKSLGQYRGFCDLVVDEYLPQFIQEL 196
Query: 192 VSDLK-PAETCKMIGICGNLTSAPISPLVARELV 290
+ L+ P + C I C SA L AR+ V
Sbjct: 197 DAILQDPHQVCVDIKAC---NSASAQGLKARKYV 227
Score = 34.3 bits (75), Expect = 0.053
Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Frame = +3
Query: 21 CEFCEQLVKHLRDVLVANTTELEFYKVLQGLCKQ--TGKFKDECLHLAEQYYPVIYNFLV 194
C C+ +V+ ++ ++ N +L V C + T D C+ + Y P + V
Sbjct: 262 CFECKFVVEDMQTDMITNRKKLSD-DVRDFACYKIVTANMTDSCIDFLDLYLPTVIQMTV 320
Query: 195 SDLKPAETCKMIGICGNLTSAPISPLVARELVVKVQPKLIGAE 323
P C C + AP+ +E+ + PK++ E
Sbjct: 321 EQATPQGVCLANKCCPASSVAPLRDFTFQEIQAEKCPKMMELE 363
Score = 33.9 bits (74), Expect = 0.070
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 21 CEFCEQLVKHLRDVLVANTTELEFYKVLQG-LCKQTGKFKDECLHLAEQYYPVIYNFLVS 197
CE CE ++K + + + ++E K++ G +C++T + DEC Q I
Sbjct: 38 CEECENVIKRISEA-AKDPKKIEELKIVLGMMCRET-SYADECRLFVSQLDKFIDKLQPF 95
Query: 198 DLKPAETCKMIGICGN 245
P C + IC N
Sbjct: 96 LKNPHAVCTRLHICSN 111
>AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like
protein family protein7 protein.
Length = 318
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/73 (19%), Positives = 33/73 (45%)
Frame = +3
Query: 21 CEFCEQLVKHLRDVLVANTTELEFYKVLQGLCKQTGKFKDECLHLAEQYYPVIYNFLVSD 200
C FCE+++++ ++ V + T++ + G D+C +A++ + F+
Sbjct: 246 CAFCERMLENAKNYAVTSKTDITSFANTACASLAKGTTSDQCYQMADKKIAELAKFVDQQ 305
Query: 201 LKPAETCKMIGIC 239
+ A C + C
Sbjct: 306 VVDALWCAELNRC 318
>Z81544-9|CAI79252.1| 231|Caenorhabditis elegans Hypothetical
protein F49C5.10 protein.
Length = 231
Score = 31.1 bits (67), Expect = 0.49
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -2
Query: 463 CRKYWQNAQAALLCGAATNMRSSGSTDTAALAGSICFANGTRAIFDSSAPINLGCTLTTS 284
C+K + A + T+ + D + +ICF G +AI +S +++G +S
Sbjct: 141 CQKDNTFSSGATMVDPTTDGCTQYQIDCSPPGNTICFPTGLKAITPTSTSVSIGTDFPSS 200
Query: 283 SLAT 272
S AT
Sbjct: 201 STAT 204
>AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 868
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 278 GHERRDRRASEVTADPNHFARFSR 207
GH RR R ASE+ + N+ R+SR
Sbjct: 651 GHRRRSRTASEIFSTINNLRRYSR 674
>Z81553-8|CAB04497.1| 408|Caenorhabditis elegans Hypothetical
protein F56H6.8 protein.
Length = 408
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 111 LCKQTGKFKDECLHLAEQYYPVIYNFLVSDLKPAETCKMIGICGNLTS 254
+C+ FKD C H + I + LK E+C+ G GNL S
Sbjct: 150 ICELPPTFKDNCTHNYNGFCYTISQYAKVPLKAQESCQKEG--GNLVS 195
>AL117204-25|CAB55139.2| 528|Caenorhabditis elegans Hypothetical
protein Y116A8C.38 protein.
Length = 528
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +3
Query: 15 VPCEFCEQLVKHLRDVLVA----NTTELEFYKVLQGLCKQTG 128
+P L++ L+DVLVA TT +FY L LC Q G
Sbjct: 421 LPLSMGPDLIRLLKDVLVAAPTQRTTADKFYNELHVLCTQKG 462
>AL117204-15|CAB55129.1| 521|Caenorhabditis elegans Hypothetical
protein Y116A8C.24 protein.
Length = 521
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +3
Query: 15 VPCEFCEQLVKHLRDVLVA----NTTELEFYKVLQGLCKQTG 128
+P L++ L+DVLVA TT +FY L LC Q G
Sbjct: 421 LPLSMGPDLIRLLKDVLVAAPTQRTTADKFYNELHVLCTQKG 462
>Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical
protein T27D12.2a protein.
Length = 906
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 278 GHERRDRRASEVTADPNHFARFSR 207
GH RR R ASE+ + N+ ++SR
Sbjct: 689 GHRRRSRTASEIFSTINNLRKYSR 712
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 150 HLAEQYYPVIYNFLVSDLKPAETCKMIGICGNLTSAPISPLVARELVVKVQP 305
+ +E+ Y ++ N PAE CK I +L +A VARE +QP
Sbjct: 333 YCSERIYQIMKNCW--KFNPAERCKFGAIREDLVAAMFLDAVARETYNSIQP 382
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 150 HLAEQYYPVIYNFLVSDLKPAETCKMIGICGNLTSAPISPLVARELVVKVQP 305
+ +E+ Y ++ N PAE CK I +L +A VARE +QP
Sbjct: 333 YCSERIYQIMKNCW--KFNPAERCKFGAIREDLVAAMFLDAVARETYNSIQP 382
>U40797-5|AAB37548.1| 402|Caenorhabditis elegans Saposin-like
protein family protein8 protein.
Length = 402
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/85 (20%), Positives = 33/85 (38%)
Frame = +3
Query: 18 PCEFCEQLVKHLRDVLVANTTELEFYKVLQGLCKQTGKFKDECLHLAEQYYPVIYNFLVS 197
PCE C+ +V++ D + L LC T + +C ++ + Y
Sbjct: 23 PCESCKSMVQNFIDASKDRMKMAQLKVSLSMLCVGT-SHQSDCSKTLDKLDFIAYKLAPY 81
Query: 198 DLKPAETCKMIGICGNLTSAPISPL 272
+ C + +CG +P++ L
Sbjct: 82 LADTSAVCSKLQMCGESQFSPLARL 106
>AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical
protein T22B2.6 protein.
Length = 145
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 429 CSAAPLRTCAPAAVRIPPRSPAP 361
C+A + TCAP V P SP P
Sbjct: 52 CTAQCMPTCAPTCVDTPASSPVP 74
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 463 CRKYWQNAQAALLCGAATNMRSSGS 389
C+K ++N Q +LCGA T ++S +
Sbjct: 67 CKKDFENGQEDVLCGAGTPKKTSSA 91
>Z92793-2|CAD56589.1| 684|Caenorhabditis elegans Hypothetical
protein C26C6.5b protein.
Length = 684
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -2
Query: 298 TLTTSSLATSGEIGALVRLPQIP 230
T+ TSS AT I + RLPQIP
Sbjct: 530 TIPTSSTATVSSIPLVPRLPQIP 552
>Z92793-1|CAB07229.1| 681|Caenorhabditis elegans Hypothetical
protein C26C6.5a protein.
Length = 681
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -2
Query: 298 TLTTSSLATSGEIGALVRLPQIP 230
T+ TSS AT I + RLPQIP
Sbjct: 527 TIPTSSTATVSSIPLVPRLPQIP 549
>Z72503-11|CAD56560.1| 684|Caenorhabditis elegans Hypothetical
protein C26C6.5b protein.
Length = 684
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -2
Query: 298 TLTTSSLATSGEIGALVRLPQIP 230
T+ TSS AT I + RLPQIP
Sbjct: 530 TIPTSSTATVSSIPLVPRLPQIP 552
>Z72503-10|CAA96601.1| 681|Caenorhabditis elegans Hypothetical
protein C26C6.5a protein.
Length = 681
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -2
Query: 298 TLTTSSLATSGEIGALVRLPQIP 230
T+ TSS AT I + RLPQIP
Sbjct: 527 TIPTSSTATVSSIPLVPRLPQIP 549
>U41012-4|AAA82296.2| 413|Caenorhabditis elegans Hypothetical
protein C06A6.5 protein.
Length = 413
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 113 EALKNFIEFEFSSIRDENVSQ-MFDQLFAKFARNIV 9
EAL NF++F+ S+ +E SQ +Q K RN+V
Sbjct: 125 EALTNFVKFQLSTAINEFSSQDQLNQEMDKSKRNVV 160
>U40417-4|AAM69087.1| 100|Caenorhabditis elegans Saposin-like
protein family protein3 protein.
Length = 100
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Frame = +3
Query: 15 VPCEFCEQLVKHLRDVLVANTTELEFYKVLQGLCKQTGKF----KDECLHLAEQYYPVIY 182
+ CE C+ VK + +L +T ++ K + CK+ EC + I
Sbjct: 24 IECEMCKMSVKIVVPMLGEDTESIK--KAVDAECKKEFHSIPFGTQECKKFIDTKLDPII 81
Query: 183 NFLVSDLKPAETCKMIGIC 239
+ L + P++ C +G+C
Sbjct: 82 HELENGTAPSDVCTKLGMC 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,524,786
Number of Sequences: 27780
Number of extensions: 194560
Number of successful extensions: 764
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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