Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5252
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    37   6e-04
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    26   0.91 
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    25   1.6  
Z32645-2|CAA83568.1|  259|Anopheles gambiae chymotrypsin-like pr...    23   8.5  
Z18887-1|CAA79325.1|  259|Anopheles gambiae chymotrypsin 1 protein.    23   8.5  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   8.5  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 36.7 bits (81), Expect = 6e-04
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = +1

Query: 475 PYLSPTPLKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEV----KVKVPT 642
           PY     +++   +P        +  P PYTVEK  PY ++V    P EV    +V VP 
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEK--PYPIEVEKPFPVEVLKKFEVPVPK 254

Query: 643 PYPV 654
           PYPV
Sbjct: 255 PYPV 258



 Score = 34.3 bits (75), Expect = 0.003
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +1

Query: 544 VYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYPV 654
           V VP P+ V   VP+ VKV++ +PY ++V V  P  +
Sbjct: 174 VGVPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKI 210



 Score = 33.9 bits (74), Expect = 0.005
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +1

Query: 511 PLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYPV 654
           P+P        VY+P+PY ++  V   +K+ + K     ++ P PY V
Sbjct: 181 PVPIAVPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTV 228



 Score = 30.7 bits (66), Expect = 0.042
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 541 PVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYPV 654
           P  V +PY +E + P+ V+V   K +EV V  P P PV
Sbjct: 225 PYTVEKPYPIEVEKPFPVEVL--KKFEVPVPKPYPVPV 260



 Score = 29.5 bits (63), Expect = 0.098
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 550 VPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYPV 654
           VP P   +  VP    V +  P+ VKV +P PYP+
Sbjct: 166 VPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPL 200



 Score = 28.7 bits (61), Expect = 0.17
 Identities = 21/68 (30%), Positives = 28/68 (41%)
 Frame = +1

Query: 433 PIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDK 612
           P P +       K P     P   + P+P       P+ V +P+ VE    +EV   V K
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYPIEVEKPFPVEVLKKFEVP--VPK 254

Query: 613 PYEVKVKV 636
           PY V V V
Sbjct: 255 PYPVPVTV 262


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 487 PTPLKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYPV 654
           PTP      + +     TP+  P   T EK+ P+  K     PY+V   VP+  PV
Sbjct: 193 PTPGDDSDSMGASRHGKTPLATPP--TKEKRKPFFKKQETSSPYDV---VPSMRPV 243


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 368 AHQNC*GGKEGACSVYSRETRPLY 439
           AHQ+C G  +   +++S    PLY
Sbjct: 48  AHQSCAGAHQSPIAIHSHRAVPLY 71


>Z32645-2|CAA83568.1|  259|Anopheles gambiae chymotrypsin-like
           protease ANCHYM1 protein.
          Length = 259

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 526 NTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVP 639
           + +  P  V + + V + V  EV  +   PY+V ++VP
Sbjct: 16  SAAKVPKLVLDDHYVNRVVGGEVAKNGSAPYQVSLQVP 53


>Z18887-1|CAA79325.1|  259|Anopheles gambiae chymotrypsin 1 protein.
          Length = 259

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 526 NTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVP 639
           + +  P  V + + V + V  EV  +   PY+V ++VP
Sbjct: 16  SAAKVPKLVLDDHYVNRVVGGEVAKNGSAPYQVSLQVP 53


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -1

Query: 80   FLLL-GKGNHGQRCHQNNRV 24
            FLL+ GK +HG+  H+ NRV
Sbjct: 961  FLLVNGKISHGELLHRMNRV 980


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,313
Number of Sequences: 2352
Number of extensions: 10580
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)