BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5252
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein. 33 1.2
AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein. 33 1.2
BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for IM... 32 2.1
X68044-1|CAA48179.1| 280|Homo sapiens follicle stimulating horm... 30 6.3
S73199-1|AAB32071.1| 51|Homo sapiens follicle-stimulating horm... 30 6.3
S59900-1|AAB26480.1| 695|Homo sapiens follicle stimulating horm... 30 6.3
M95489-1|AAA52478.1| 695|Homo sapiens follicle stimulating horm... 30 6.3
M65085-1|AAA52477.1| 695|Homo sapiens follicle stimulating horm... 30 6.3
BC141863-1|AAI41864.1| 407|Homo sapiens TPRX1 protein protein. 30 6.3
BC125270-1|AAI25271.1| 669|Homo sapiens FSHR protein protein. 30 6.3
BC118548-1|AAI18549.1| 695|Homo sapiens follicle stimulating ho... 30 6.3
BC096831-1|AAH96831.1| 695|Homo sapiens follicle stimulating ho... 30 6.3
AY429104-1|AAR07899.1| 695|Homo sapiens follicle stimulating ho... 30 6.3
AC092533-1|AAX88895.1| 51|Homo sapiens unknown protein. 30 6.3
Z22948-1|CAA80524.2| 550|Homo sapiens p65 subunit of transcript... 30 8.3
M62399-1|AAA36408.1| 551|Homo sapiens NF-kappa-B transcription ... 30 8.3
L19067-1|AAA20946.1| 537|Homo sapiens NF-kappa-B transcription ... 30 8.3
D13633-1|BAA02797.2| 876|Homo sapiens KIAA0008 protein. 30 8.3
BT007344-1|AAP36008.1| 765|Homo sapiens discs, large homolog 7 ... 30 8.3
BC033522-1|AAH33522.1| 548|Homo sapiens RELA protein protein. 30 8.3
BC032382-1|AAH32382.1| 237|Homo sapiens LOC440456 protein protein. 30 8.3
BC016276-1|AAH16276.2| 846|Homo sapiens discs, large homolog 7 ... 30 8.3
BC010658-1|AAH10658.2| 846|Homo sapiens discs, large homolog 7 ... 30 8.3
AY455868-1|AAR13863.1| 534|Homo sapiens v-rel reticuloendotheli... 30 8.3
AB076695-1|BAB97376.1| 846|Homo sapiens hepatoma up-regulated p... 30 8.3
>BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 32.7 bits (71), Expect = 1.2
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 415 QSRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEV 594
Q+R +P +R +R P +PTPL+ P+ +R TP+ P
Sbjct: 4 QARTPAPSSARTSTSVRASTPTRTPTPLRTPTPVRTR----TPIRTLTPVLTPSPAGTSP 59
Query: 595 KVHVDKPYEVKVKVPTP 645
V P ++ VPTP
Sbjct: 60 LVLTPAPAQIPTLVPTP 76
>AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 32.7 bits (71), Expect = 1.2
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 415 QSRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEV 594
Q+R +P +R +R P +PTPL+ P+ +R TP+ P
Sbjct: 4 QARTPAPSSARTSTSVRASTPTRTPTPLRTPTPVRTR----TPIRTLTPVLTPSPAGTSP 59
Query: 595 KVHVDKPYEVKVKVPTP 645
V P ++ VPTP
Sbjct: 60 LVLTPAPAQIPTLVPTP 76
>BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for
IMAGE:3866238) protein.
Length = 358
Score = 31.9 bits (69), Expect = 2.1
Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
Frame = +1
Query: 430 SPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTPVYVPEPYTVEKKVP-------Y 588
SP+ K P + K P K P + + TP P E K P
Sbjct: 97 SPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKAPEKEIPKKE 156
Query: 589 EVKVHV---DKPYEVKVKVP 639
EVK V +KP EVKVK P
Sbjct: 157 EVKSPVKEEEKPQEVKVKEP 176
>X68044-1|CAA48179.1| 280|Homo sapiens follicle stimulating
hormone receptor protein.
Length = 280
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 83 AFLLLGKGNHGQRCHQNNRVLHC 15
AFL LG G H + CH +NRV C
Sbjct: 10 AFLRLGSGCHHRICHCSNRVFLC 32
>S73199-1|AAB32071.1| 51|Homo sapiens follicle-stimulating
hormone receptor protein.
Length = 51
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 83 AFLLLGKGNHGQRCHQNNRVLHC 15
AFL LG G H + CH +NRV C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32
>S59900-1|AAB26480.1| 695|Homo sapiens follicle stimulating
hormone receptor protein.
Length = 695
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 83 AFLLLGKGNHGQRCHQNNRVLHC 15
AFL LG G H + CH +NRV C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32
>M95489-1|AAA52478.1| 695|Homo sapiens follicle stimulating
hormone receptor protein.
Length = 695
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 83 AFLLLGKGNHGQRCHQNNRVLHC 15
AFL LG G H + CH +NRV C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32
>M65085-1|AAA52477.1| 695|Homo sapiens follicle stimulating
hormone receptor protein.
Length = 695
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 83 AFLLLGKGNHGQRCHQNNRVLHC 15
AFL LG G H + CH +NRV C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32
>BC141863-1|AAI41864.1| 407|Homo sapiens TPRX1 protein protein.
Length = 407
Score = 30.3 bits (65), Expect = 6.3
Identities = 20/82 (24%), Positives = 31/82 (37%)
Frame = +1
Query: 409 RIQSRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTPVYVPEPYTVEKKVPY 588
+I S +PIP P++ P+ P P P P + P P P + P
Sbjct: 126 QIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFSGPNPGPIPGPNPG 185
Query: 589 EVKVHVDKPYEVKVKVPTPYPV 654
+ + P + VP P P+
Sbjct: 186 PIPGPISGPIPGPISVPIPGPI 207
>BC125270-1|AAI25271.1| 669|Homo sapiens FSHR protein protein.
Length = 669
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 83 AFLLLGKGNHGQRCHQNNRVLHC 15
AFL LG G H + CH +NRV C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32
>BC118548-1|AAI18549.1| 695|Homo sapiens follicle stimulating
hormone receptor protein.
Length = 695
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 83 AFLLLGKGNHGQRCHQNNRVLHC 15
AFL LG G H + CH +NRV C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32
>BC096831-1|AAH96831.1| 695|Homo sapiens follicle stimulating
hormone receptor protein.
Length = 695
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 83 AFLLLGKGNHGQRCHQNNRVLHC 15
AFL LG G H + CH +NRV C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32
>AY429104-1|AAR07899.1| 695|Homo sapiens follicle stimulating
hormone receptor protein.
Length = 695
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 83 AFLLLGKGNHGQRCHQNNRVLHC 15
AFL LG G H + CH +NRV C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32
>AC092533-1|AAX88895.1| 51|Homo sapiens unknown protein.
Length = 51
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 83 AFLLLGKGNHGQRCHQNNRVLHC 15
AFL LG G H + CH +NRV C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32
>Z22948-1|CAA80524.2| 550|Homo sapiens p65 subunit of transcription
factor NF-kappaB protein.
Length = 550
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +1
Query: 469 KCPYLSPT---PLKRKFPLPSRNTSNTPVYVPEPY 564
K P+ PT P R+ +PSR++++ P P+PY
Sbjct: 315 KSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPY 349
>M62399-1|AAA36408.1| 551|Homo sapiens NF-kappa-B transcription
factor protein.
Length = 551
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +1
Query: 469 KCPYLSPT---PLKRKFPLPSRNTSNTPVYVPEPY 564
K P+ PT P R+ +PSR++++ P P+PY
Sbjct: 315 KSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPY 349
>L19067-1|AAA20946.1| 537|Homo sapiens NF-kappa-B transcription
factor subunit protein.
Length = 537
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +1
Query: 469 KCPYLSPT---PLKRKFPLPSRNTSNTPVYVPEPY 564
K P+ PT P R+ +PSR++++ P P+PY
Sbjct: 302 KSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPY 336
>D13633-1|BAA02797.2| 876|Homo sapiens KIAA0008 protein.
Length = 876
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 69 KEEKGTPKAVEEKKQDKRGIYDIGSY 146
KEEK K E++++ KRGI+ +G Y
Sbjct: 128 KEEKQLQKLKEQREKAKRGIFKVGRY 153
>BT007344-1|AAP36008.1| 765|Homo sapiens discs, large homolog 7
(Drosophila) protein.
Length = 765
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 69 KEEKGTPKAVEEKKQDKRGIYDIGSY 146
KEEK K E++++ KRGI+ +G Y
Sbjct: 17 KEEKQLQKLKEQREKAKRGIFKVGRY 42
>BC033522-1|AAH33522.1| 548|Homo sapiens RELA protein protein.
Length = 548
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +1
Query: 469 KCPYLSPT---PLKRKFPLPSRNTSNTPVYVPEPY 564
K P+ PT P R+ +PSR++++ P P+PY
Sbjct: 312 KSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPY 346
>BC032382-1|AAH32382.1| 237|Homo sapiens LOC440456 protein protein.
Length = 237
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 397 RCLFRIQSRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPL-PSRNTSNT-PVYVPEPY 564
RC +++ R TSP P R+ P R P L P + L P++ T T EPY
Sbjct: 118 RCRCQLRFRETSPAPPRKPRPGRWSGPNLPAPPTRPLGSLRPAQQTRGTLDKVAKEPY 175
>BC016276-1|AAH16276.2| 846|Homo sapiens discs, large homolog 7
(Drosophila) protein.
Length = 846
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 69 KEEKGTPKAVEEKKQDKRGIYDIGSY 146
KEEK K E++++ KRGI+ +G Y
Sbjct: 98 KEEKQLQKLKEQREKAKRGIFKVGRY 123
>BC010658-1|AAH10658.2| 846|Homo sapiens discs, large homolog 7
(Drosophila) protein.
Length = 846
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 69 KEEKGTPKAVEEKKQDKRGIYDIGSY 146
KEEK K E++++ KRGI+ +G Y
Sbjct: 98 KEEKQLQKLKEQREKAKRGIFKVGRY 123
>AY455868-1|AAR13863.1| 534|Homo sapiens v-rel
reticuloendotheliosis viral oncogene homolog A, nuclear
factor of kappa l protein.
Length = 534
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +1
Query: 469 KCPYLSPT---PLKRKFPLPSRNTSNTPVYVPEPY 564
K P+ PT P R+ +PSR++++ P P+PY
Sbjct: 298 KSPFSGPTDPRPPPRRIAVPSRSSASVPKPAPQPY 332
>AB076695-1|BAB97376.1| 846|Homo sapiens hepatoma up-regulated
protein protein.
Length = 846
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 69 KEEKGTPKAVEEKKQDKRGIYDIGSY 146
KEEK K E++++ KRGI+ +G Y
Sbjct: 98 KEEKQLQKLKEQREKAKRGIFKVGRY 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,109,977
Number of Sequences: 237096
Number of extensions: 1540964
Number of successful extensions: 4758
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4721
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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