Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5252
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    32   0.004
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    32   0.004
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    29   0.030
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    29   0.039
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.8  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 32.3 bits (70), Expect = 0.004
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +1

Query: 475 PYLSPTPLKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P   PT L+R+    +   +N PVY+P+P     ++  E +   +      V +P P P
Sbjct: 24  PPTRPTRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 82



 Score = 28.3 bits (60), Expect = 0.068
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+    +   +N PVY+P+P     ++  E K          V +P P P
Sbjct: 223 PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAKPGNNRPVYIPQPRP 278



 Score = 27.9 bits (59), Expect = 0.090
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+    +   +N PVY+P+P     ++  E +   +      V +P P P
Sbjct: 167 PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 222



 Score = 27.9 bits (59), Expect = 0.090
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+    +   +N PVY+P+P     ++  E +   +      V +P P P
Sbjct: 195 PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 250



 Score = 27.5 bits (58), Expect = 0.12
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+  L +   +N PVY+ +P     ++  E +   +      V +P P P
Sbjct: 83  PHPRLRREAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 138



 Score = 27.5 bits (58), Expect = 0.12
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+  L +   +N PVY+ +P     ++  E +   +      V +P P P
Sbjct: 139 PHPRLRREAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 194



 Score = 25.8 bits (54), Expect = 0.36
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+    +   +N PVY+P+P     ++  E ++  +      V +  P P
Sbjct: 55  PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAELEAEPGNNRPVYISQPRP 110



 Score = 25.8 bits (54), Expect = 0.36
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+    +   +N PVY+P+P     ++  E ++  +      V +  P P
Sbjct: 111 PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAELEAEPGNNRPVYISQPRP 166


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 32.3 bits (70), Expect = 0.004
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +1

Query: 475 PYLSPTPLKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P   PT L+R+    +   +N PVY+P+P     ++  E +   +      V +P P P
Sbjct: 25  PPTRPTRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 83



 Score = 27.9 bits (59), Expect = 0.090
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+    +   +N PVY+P+P     ++  E +   +      V +P P P
Sbjct: 56  PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 111



 Score = 27.9 bits (59), Expect = 0.090
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+    +   +N PVY+P+P     ++  E +   +      V +P P P
Sbjct: 84  PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 139


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 29.5 bits (63), Expect = 0.030
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+    +   +N PVY+P+P     ++  E K   +      V +P P P
Sbjct: 111 PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAEPGNNRPVYIPQPRP 166



 Score = 28.7 bits (61), Expect = 0.052
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +1

Query: 490 TPLKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           T L+R+    +   +N PVY+P+P     ++  E +   +      V +P P P
Sbjct: 1   TRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 54



 Score = 27.9 bits (59), Expect = 0.090
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+    +   +N PVY+P+P     ++  E +   +      V +P P P
Sbjct: 27  PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 82



 Score = 27.9 bits (59), Expect = 0.090
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+    +   +N PVY+P+P     ++  E +   +      V +P P P
Sbjct: 55  PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 110



 Score = 27.9 bits (59), Expect = 0.090
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+    +   +N PVY+P+P     ++  E +   +      V +P P P
Sbjct: 83  PHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 138



 Score = 27.9 bits (59), Expect = 0.090
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTPLKRKFPLPSRNTSNT-PVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P  R+   P     N  PVY+P+P     ++  E +   +      V +P P P
Sbjct: 139 PHPRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 194


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 29.1 bits (62), Expect = 0.039
 Identities = 13/59 (22%), Positives = 26/59 (44%)
 Frame = +1

Query: 475 PYLSPTPLKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P   P  L+R+    +   +N P+Y+P+P     ++  E +   +      + +P P P
Sbjct: 25  PPTRPARLRREAKPEAEPGNNRPIYIPQPRPPHPRLRREAEPKAEPGNNRPIYIPQPRP 83



 Score = 27.5 bits (58), Expect = 0.12
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYP 651
           P P L+R+    +   +N P+Y+P+P     ++  E +   +      V +P P P
Sbjct: 56  PHPRLRREAEPKAEPGNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRP 111



 Score = 24.6 bits (51), Expect = 0.84
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 487 PTP-LKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTP 645
           P P L+R+    +   +N PVY+P+P     ++  E +        V +  P P
Sbjct: 84  PHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRP 137



 Score = 24.6 bits (51), Expect = 0.84
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +1

Query: 487 PTPLKRKFPLPSRNTSNTPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTP 645
           P P  R+ P  +   +N PVY+P+P     ++  E +        V +  P P
Sbjct: 112 PHPRLRREP-EAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRP 163


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 376 KLLRW*RRCLFRIQSRNTSPIPSRRKYPMR 465
           K L W ++ +F  ++   +P+ S +KY +R
Sbjct: 80  KFLWWYKQGMFLSRNAIFTPLNSEQKYEVR 109


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 376 KLLRW*RRCLFRIQSRNTSPIPSRRKYPMR 465
           K L W ++ +F  ++   +P+ S +KY +R
Sbjct: 80  KFLWWYKQGMFLSRNAIFTPLNSEQKYEVR 109


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 544 VYVPEPYTVEKKVPYEVKVHVDK 612
           +Y+PEP  +E    Y    H ++
Sbjct: 650 IYIPEPQDIENIFKYGYVSHANQ 672


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,965
Number of Sequences: 438
Number of extensions: 3371
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)