Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5250
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 37 0.013
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 34 0.070
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 33 0.21
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 32 0.28
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 32 0.28
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 32 0.28
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 32 0.37
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 32 0.37
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 32 0.37
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.49
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 31 0.65
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 30 1.1
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 2.0
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 29 2.6
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 29 2.6
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z66523-8|CAE17855.1| 155|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 3.5
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 3.5
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 29 3.5
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 3.5
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 29 3.5
AC006772-3|AAF60608.1| 85|Caenorhabditis elegans Hypothetical ... 29 3.5
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 6.1
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 6.1
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 28 6.1
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 28 6.1
AF022981-1|AAG24206.1| 455|Caenorhabditis elegans Hypothetical ... 28 6.1
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 27 8.1
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 27 8.1
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 27 8.1
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 27 8.1
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 27 8.1
AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (... 27 8.1
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 36.7 bits (81), Expect = 0.013
Identities = 35/112 (31%), Positives = 45/112 (40%), Gaps = 1/112 (0%)
Frame = +3
Query: 129 P*PASAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSCLPHFSTPLLLG*IC 308
P P AP +CC R PC GCP+ G C GRP C ++ P C
Sbjct: 146 PPPPPAPEAPTQCCGSQPYGRTPCR-SGCPN----GDCGC-GRPCC--YYQNP-----TC 192
Query: 309 LVPKHRPS*PAPDYPIRRSCSQVG-RRCSRSLPHCSRPCYLPRRPCHRVLPL 461
+ P P+ P C ++ C S+P C R C P PC + L L
Sbjct: 193 CNQGQKACCP-PEQP---CCPELKLDNCLASVPPCLRAC--PSCPCRKRLML 238
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = +3
Query: 153 CQARCCY---PCSLPRGPCSVPGCPSCLPR-GPCSVPGRPSCLP 272
C + CC P L P P P C P GPC P P+C P
Sbjct: 56 CSSSCCSSQKPIPLACCPPPPPPKPCCQPAFGPCC-PATPNCCP 98
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 34.3 bits (75), Expect = 0.070
Identities = 40/147 (27%), Positives = 54/147 (36%), Gaps = 23/147 (15%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGP-CS---------VPGC-PSCLPRGPCSVPGRPSCLPHFS--- 281
AP CQ +C C+LP P C P C C P+ C P P C S
Sbjct: 309 APVCQQQCAPQCTLPSAPVCQQCQTSCQQFAPVCQEQCAPQ--CQQPAAPQCQQCQSACQ 366
Query: 282 TPLLLG*IC---LVPK-HRPS*PAPDYPIRRSCSQVGRRCSRSLP----HCSRPCYLPRR 437
+P++ I +VP+ + P P C Q C + P C+ C LP
Sbjct: 367 SPVIAPQIITLEVVPECQQQCAPQCQQPSAPQCQQCQNTCQQFAPVCQQQCAPQCTLPSA 426
Query: 438 P-CHRVLPLCPGSQNRSSPS*GDCLPQ 515
P C + C +Q C+PQ
Sbjct: 427 PACQQCQTSCQQTQQCHQ----QCIPQ 449
Score = 30.3 bits (65), Expect = 1.1
Identities = 28/115 (24%), Positives = 38/115 (33%), Gaps = 1/115 (0%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSC-LPHFSTPLLLG*ICLVPK 320
AP CQ +C C+LP P SC C P C P C P
Sbjct: 410 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCHQQCIPQCQQPAAPQCQQCQSACQSPV 469
Query: 321 HRPS*PAPDYPIRRSCSQVGRRCSRSLPHCSRPCYLPRRPCHRVLPLCPGSQNRS 485
P + S SQ + C + C ++P + P C S ++S
Sbjct: 470 VAPQ--IVTVILEASVSQSAQCEPECQQSCQQQCVQQQQPMIQCAPACTQSCSQS 522
Score = 29.5 bits (63), Expect = 2.0
Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 8/110 (7%)
Frame = +3
Query: 117 KHCAP*PASAPRCQARCCYPCSLPRGPCSVPGCPS-CLPRGPCSVPGRPSCLPHFS---T 284
+ C +C +C C P +VP C C P+ C P P C S +
Sbjct: 210 RQCVQQQFPVQQCTQQCTLECQ-PTCQQAVPQCQQQCAPQ--CQQPSAPQCQQCQSACQS 266
Query: 285 PLLLG*IC---LVPK-HRPS*PAPDYPIRRSCSQVGRRCSRSLPHCSRPC 422
P++ I +VP+ + P P C Q C + P C + C
Sbjct: 267 PVVAPQIITLEVVPQCQQQCAPQCQQPAAPQCQQCQTTCQQFAPVCQQQC 316
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 387 CSRSLPHCSRPCYLPRRPCHRVLPLCPGSQN 479
C LP CS+PC P H V C G QN
Sbjct: 632 CGARLPVCSQPCVRPHSCDHSVSHKCHGEQN 662
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 32.3 bits (70), Expect = 0.28
Identities = 34/140 (24%), Positives = 50/140 (35%), Gaps = 7/140 (5%)
Frame = +3
Query: 117 KHCAP*PASAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPG-RPSCLPHFSTPLL 293
+ C P S CQ+ C C C P P+ + P +P SC+ +
Sbjct: 94 RQCQSAP-SVSNCQSSCQQTCQT--SSCYTPVAPAPVQCQPSCMPACEQSCVAPAPQVIS 150
Query: 294 LG*ICLVPK-HRPS*PAPDYPIRRSCSQVGRRCSRSLP----HCSRPCYLPRRP-CHRVL 455
L + +VP+ + P P C Q C + P C+ C LP P C +
Sbjct: 151 LN-LEVVPQCQQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQQCTPQCTLPSAPACQQCQ 209
Query: 456 PLCPGSQNRSSPS*GDCLPQ 515
C +Q C+PQ
Sbjct: 210 TSCQQTQQCQQ----QCIPQ 225
Score = 31.5 bits (68), Expect = 0.49
Identities = 27/111 (24%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSC-LPHFSTPLLLG*ICLVPK 320
AP CQ +C C+LP P SC C P C P C P
Sbjct: 186 APVCQQQCTPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 245
Query: 321 HRPS*PAPDYPIRRSCSQVGRRCSRSLPHCSRPCYLPRRPCHRVLPLCPGS 473
P + S SQ + + C + C ++P + P C S
Sbjct: 246 VAPQ--IVTVILEPSVSQSAQCVPQCQQSCQQQCIQQQQPMQQCAPACTQS 294
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 32.3 bits (70), Expect = 0.28
Identities = 34/140 (24%), Positives = 50/140 (35%), Gaps = 7/140 (5%)
Frame = +3
Query: 117 KHCAP*PASAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPG-RPSCLPHFSTPLL 293
+ C P S CQ+ C C C P P+ + P +P SC+ +
Sbjct: 94 RQCQSAP-SVSNCQSSCQQTCQT--SSCYTPVAPAPVQCQPSCMPACEQSCVAPAPQVIS 150
Query: 294 LG*ICLVPK-HRPS*PAPDYPIRRSCSQVGRRCSRSLP----HCSRPCYLPRRP-CHRVL 455
L + +VP+ + P P C Q C + P C+ C LP P C +
Sbjct: 151 LN-LEVVPQCQQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQQCTPQCTLPSAPACQQCQ 209
Query: 456 PLCPGSQNRSSPS*GDCLPQ 515
C +Q C+PQ
Sbjct: 210 TSCQQTQQCQQ----QCIPQ 225
Score = 31.5 bits (68), Expect = 0.49
Identities = 27/111 (24%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSC-LPHFSTPLLLG*ICLVPK 320
AP CQ +C C+LP P SC C P C P C P
Sbjct: 186 APVCQQQCTPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 245
Query: 321 HRPS*PAPDYPIRRSCSQVGRRCSRSLPHCSRPCYLPRRPCHRVLPLCPGS 473
P + S SQ + + C + C ++P + P C S
Sbjct: 246 VAPQ--IVTVILEPSVSQSAQCVPQCQQSCQQQCIQQQQPMQQCAPACTQS 294
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 32.3 bits (70), Expect = 0.28
Identities = 38/133 (28%), Positives = 45/133 (33%), Gaps = 7/133 (5%)
Frame = +3
Query: 129 P*PASAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPG--RPSCLPHF-----STP 287
P P P C C P +P P V G P C GP P P+C P P
Sbjct: 59 PPPCFGPACPPPCFGPACVPLAPIIVNGPPPCF--GPACPPPCFGPACAPPAPIIVNGPP 116
Query: 288 LLLG*ICLVPKHRPS*PAPDYPIRRSCSQVGRRCSRSLPHCSRPCYLPRRPCHRVLPLCP 467
G C P P+ AP PI V P C PC+ P P+
Sbjct: 117 PCFGPACPPPCFGPA-CAPSAPI-----IVNGPPPCFGPACPPPCFGPACAPPPPAPILF 170
Query: 468 GSQNRSSPS*GDC 506
GS +P+ C
Sbjct: 171 GSVTCCAPNNYSC 183
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 31.9 bits (69), Expect = 0.37
Identities = 27/111 (24%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSC-LPHFSTPLLLG*ICLVPK 320
AP CQ +C C+LP P SC C P C P C P
Sbjct: 270 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 329
Query: 321 HRPS*PAPDYPIRRSCSQVGRRCSRSLPHCSRPCYLPRRPCHRVLPLCPGS 473
P + S SQ + + C + C ++P + P C S
Sbjct: 330 VAPQ--IVTVILEPSVSQSAQCVPQCQQSCQQQCIQQQQPMQQCAPACTQS 378
Score = 28.7 bits (61), Expect = 3.5
Identities = 28/124 (22%), Positives = 41/124 (33%), Gaps = 17/124 (13%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGP-------CSVPGCPSCLPRGP---------CSVPGRPSCLPH 275
AP+CQ +C C L + P C+ P +C P C P P C
Sbjct: 203 APQCQQQCQQQCLLQQVPVQQCYQECTQPCQTTCQQAAPQCVQQCAPQCQQPSAPQCQQC 262
Query: 276 FSTPLLLG*ICLVPKHRPS*PAPDYPIRRSCSQVGRRCSRSLPHCSRPCYLPRRP-CHRV 452
+T +C + P P P + C ++ + C C P P C +
Sbjct: 263 QNTCQQYAPVC-QQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQC 321
Query: 453 LPLC 464
C
Sbjct: 322 QSAC 325
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 31.9 bits (69), Expect = 0.37
Identities = 27/111 (24%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSC-LPHFSTPLLLG*ICLVPK 320
AP CQ +C C+LP P SC C P C P C P
Sbjct: 271 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 330
Query: 321 HRPS*PAPDYPIRRSCSQVGRRCSRSLPHCSRPCYLPRRPCHRVLPLCPGS 473
P + S SQ + + C + C ++P + P C S
Sbjct: 331 VAPQ--IVTVILEPSVSQSAQCVPQCQQSCQQQCIQQQQPMQQCAPACTQS 379
Score = 28.7 bits (61), Expect = 3.5
Identities = 28/124 (22%), Positives = 41/124 (33%), Gaps = 17/124 (13%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGP-------CSVPGCPSCLPRGP---------CSVPGRPSCLPH 275
AP+CQ +C C L + P C+ P +C P C P P C
Sbjct: 204 APQCQQQCQQQCLLQQVPVQQCYQECTQPCQTTCQQAAPQCVQQCAPQCQQPSAPQCQQC 263
Query: 276 FSTPLLLG*ICLVPKHRPS*PAPDYPIRRSCSQVGRRCSRSLPHCSRPCYLPRRP-CHRV 452
+T +C + P P P + C ++ + C C P P C +
Sbjct: 264 QNTCQQYAPVC-QQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQC 322
Query: 453 LPLC 464
C
Sbjct: 323 QSAC 326
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 31.9 bits (69), Expect = 0.37
Identities = 27/111 (24%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSC-LPHFSTPLLLG*ICLVPK 320
AP CQ +C C+LP P SC C P C P C P
Sbjct: 186 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 245
Query: 321 HRPS*PAPDYPIRRSCSQVGRRCSRSLPHCSRPCYLPRRPCHRVLPLCPGS 473
P + S SQ + + C + C ++P + P C S
Sbjct: 246 VAPQ--IVTVILEPSVSQSAQCVPQCQQSCQQQCIQQQQPMQQCAPACTQS 294
Score = 31.1 bits (67), Expect = 0.65
Identities = 34/140 (24%), Positives = 50/140 (35%), Gaps = 7/140 (5%)
Frame = +3
Query: 117 KHCAP*PASAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPG-RPSCLPHFSTPLL 293
+ C P S CQ+ C C C P P+ + P +P SC+ +
Sbjct: 94 RQCQSAP-SVSNCQSSCQQTCQT--SSCYTPVAPAPVQCQPSCMPVCEQSCVAPAPQVIS 150
Query: 294 LG*ICLVPK-HRPS*PAPDYPIRRSCSQVGRRCSRSLP----HCSRPCYLPRRP-CHRVL 455
L + +VP+ + P P C Q C + P C+ C LP P C +
Sbjct: 151 LN-LEVVPQCQQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQQCAPQCTLPSAPACQQCQ 209
Query: 456 PLCPGSQNRSSPS*GDCLPQ 515
C +Q C+PQ
Sbjct: 210 TSCQQTQQCQQ----QCIPQ 225
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 177 CSLPRGPCSVPGCPSCLPRGPCSVPGRPSCLPHFSTP 287
CS+ PC P P C P P P P C P F P
Sbjct: 23 CSMGPPPCPPPPPPMCAP-PPLPCPPPPICPPQFCPP 58
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 31.1 bits (67), Expect = 0.65
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +3
Query: 120 HCAP*PASAPRCQARCCYPCSLP--RGPCSVPGCPSCLPR--GPCSVPGRPSCLPHFS 281
H P +A Q + C C +P RGP G P+ LP GP PGRP P+ S
Sbjct: 100 HYNPSMLAADSPQFQECPACCIPGERGPSGDSGLPA-LPGAPGPDGAPGRPGTTPNAS 156
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 126 AP*PASAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRP 260
AP P AP +P P C C P+GP VPG P
Sbjct: 139 APGPDGAPGRPGTTPNASCIPERVFEPPPCLPC-PQGPRGVPGHP 182
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 30.3 bits (65), Expect = 1.1
Identities = 27/117 (23%), Positives = 39/117 (33%), Gaps = 2/117 (1%)
Frame = +3
Query: 141 SAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSC-LPHFSTPLLLG*ICLVP 317
+AP CQ +C C P SC C P C P C P
Sbjct: 272 AAPVCQQQCAPQCQQQSAPACQQCQTSCQQTQQCQQQCTPQCQQPSAPQCQQCQSACQAP 331
Query: 318 KHRPS*P-APDYPIRRSCSQVGRRCSRSLPHCSRPCYLPRRPCHRVLPLCPGSQNRS 485
+ P A + S SQ + + C + C ++P + P C S ++S
Sbjct: 332 VATTAAPQAVTIILEASVSQSAQCEPQCQQSCQQQCVQQQQPMQQCAPACTQSCSQS 388
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +3
Query: 171 YPCSLPRGPC---SVPGCPSCLPRGPCSVPGRP 260
+P P+ PC + P CP+C P GP PG P
Sbjct: 129 HPGKPPQSPCEPLTPPPCPAC-PPGPPGAPGAP 160
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 30.3 bits (65), Expect = 1.1
Identities = 26/111 (23%), Positives = 35/111 (31%), Gaps = 1/111 (0%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSC-LPHFSTPLLLG*ICLVPK 320
AP CQ +C C+ P P SC C P C P C P
Sbjct: 186 APVCQQQCAPQCTFPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 245
Query: 321 HRPS*PAPDYPIRRSCSQVGRRCSRSLPHCSRPCYLPRRPCHRVLPLCPGS 473
P + S SQ + + C + C ++P + P C S
Sbjct: 246 VAPQ--IVTVILEPSVSQSAQCVPQCQQSCQQQCIQQQQPMQQCAPACTQS 294
Score = 29.5 bits (63), Expect = 2.0
Identities = 32/137 (23%), Positives = 49/137 (35%), Gaps = 4/137 (2%)
Frame = +3
Query: 117 KHCAP*PASAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPG-RPSCLPHFSTPLL 293
+ C P S CQ+ C C C P P+ + P +P SC+ +
Sbjct: 94 RQCQSAP-SVSNCQSSCQQTCQT--SSCYTPVAPAPVQCQPSCMPVCEQSCVAPAPQVIS 150
Query: 294 LG*ICLVPK-HRPS*PAPDYPIRRSCSQVGRRCSRSLPHCSRPCYLPR--RPCHRVLPLC 464
L + +VP+ + P P C Q C + P C + C P+ P C
Sbjct: 151 LN-LEVVPQCQQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQQC-APQCTFPSAPACQQC 208
Query: 465 PGSQNRSSPS*GDCLPQ 515
S ++ C+PQ
Sbjct: 209 QTSCQQTQQCQQQCIPQ 225
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 174 PCSLPRGPCSVPGCPSCLPRGPCSVPG 254
P LP P +VP C C P GP PG
Sbjct: 142 PTGLPCDPVTVPPCKPC-PPGPAGEPG 167
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +3
Query: 342 PDYPIRRSCSQVGRRCSRSLPHCSRP---CYLPRRPCHRVLPLCPGSQNRSSPS*GDCLP 512
P YP +S Q C +C P C LP PC +P CP + P+ CLP
Sbjct: 625 PQYP--QSYQQPSCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPA-PVCLP 681
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 177 CSLPRGPCSVPGCPSCLPRGPCSVPGRPSCLP 272
C P PC +P P C P PC + C P
Sbjct: 645 CCAPPAPCCLPTIP-CCPPIPCCPQPKICCQP 675
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +3
Query: 342 PDYPIRRSCSQVGRRCSRSLPHCSRP---CYLPRRPCHRVLPLCPGSQNRSSPS*GDCLP 512
P YP +S Q C +C P C LP PC +P CP + P+ CLP
Sbjct: 270 PQYP--QSYQQPSCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPA-PVCLP 326
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 177 CSLPRGPCSVPGCPSCLPRGPCSVPGRPSCLP 272
C P PC +P P C P PC + C P
Sbjct: 290 CCAPPAPCCLPTIP-CCPPIPCCPQPKICCQP 320
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +3
Query: 342 PDYPIRRSCSQVGRRCSRSLPHCSRP---CYLPRRPCHRVLPLCPGSQNRSSPS*GDCLP 512
P YP +S Q C +C P C LP PC +P CP + P+ CLP
Sbjct: 222 PQYP--QSYQQPSCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPA-PVCLP 278
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 177 CSLPRGPCSVPGCPSCLPRGPCSVPGRPSCLP 272
C P PC +P P C P PC + C P
Sbjct: 242 CCAPPAPCCLPTIP-CCPPIPCCPQPKICCQP 272
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +3
Query: 342 PDYPIRRSCSQVGRRCSRSLPHCSRP---CYLPRRPCHRVLPLCPGSQNRSSPS*GDCLP 512
P YP +S Q C +C P C LP PC +P CP + P+ CLP
Sbjct: 950 PQYP--QSYQQPSCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPA-PVCLP 1006
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 177 CSLPRGPCSVPGCPSCLPRGPCSVPGRPSCLP 272
C P PC +P P C P PC + C P
Sbjct: 970 CCAPPAPCCLPTIP-CCPPIPCCPQPKICCQP 1000
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.1 bits (62), Expect = 2.6
Identities = 33/140 (23%), Positives = 49/140 (35%), Gaps = 5/140 (3%)
Frame = +3
Query: 60 SWTPGCSRALLSR*SRFFPKHCAP*PASAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGP 239
S P CS++ + + + PA P C + C + C+ CPS +
Sbjct: 177 SCMPSCSQSCIQKYEITVEQETCV-PACMPACSSACVQAVTC--STCT-NNCPSICSQAN 232
Query: 240 CSVPGRPSCLPHFSTPLLLG*ICLVPKHRPS*PAPDYP-IRRSCSQVGRRCSRSL-PHCS 413
C P CLP + + +P P + P SC Q C + P C+
Sbjct: 233 CIPQCMPRCLPTCIQQIQIS--VPLPPPAPRCDSMCMPSCSPSCVQQYSLCPQQCRPMCT 290
Query: 414 RPCYL---PRRPCHRVLPLC 464
C RP + LP C
Sbjct: 291 NACVTNLQVSRPVSQCLPAC 310
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 198 CSVPGCPSCLPRGPCSVPGRPSCLPHF 278
C +P C SC G C+ PG SC +
Sbjct: 886 CQIPLCNSCSLNGICTRPGFCSCFEDY 912
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 28.7 bits (61), Expect = 3.5
Identities = 26/117 (22%), Positives = 38/117 (32%), Gaps = 2/117 (1%)
Frame = +3
Query: 141 SAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSC-LPHFSTPLLLG*ICLVP 317
+AP CQ +C C P SC C P C P C P
Sbjct: 272 AAPVCQQQCAPQCQQQSAPACQQCQTSCQQTQQCQQQCTPQCQQPSAPQCQQCQSACQAP 331
Query: 318 KHRPS*P-APDYPIRRSCSQVGRRCSRSLPHCSRPCYLPRRPCHRVLPLCPGSQNRS 485
+ P + S SQ + + C + C ++P + P C S ++S
Sbjct: 332 VATTAAPQVVTIILEASVSQSAQCEPQCQQSCQQQCVQQQQPMQQCAPACTQSCSQS 388
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 135 PASAPRCQARC---CYPCSLPRGPCSV-PGCPSCLPRGPCSVPGRPSCLPHFS 281
P+ AP+CQ C C +L + P PSC P+ C +PSC+ ++
Sbjct: 648 PSCAPQCQPACDPQCISFTLKLPVMTTPPPTPSCQPQ--CQPACQPSCMETYT 698
>Z66523-8|CAE17855.1| 155|Caenorhabditis elegans Hypothetical
protein M05D6.8 protein.
Length = 155
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 363 SCSQVGRRCSRSLPHCSRPCY--LPRRPCHRVLPLCP 467
+C + +RCS+ P C+R Y + R C + CP
Sbjct: 90 NCYDISKRCSKVKPLCTRNEYKTIMMRQCAKTCGFCP 126
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 174 PCSLPRGP-CSVPGCPSCLPRGPCSVPGRPSCLP 272
P S RG C P PS PR PC P R C P
Sbjct: 1910 PDSSQRGRVCEPPPPPSPPPRHPCQDPERNDCHP 1943
Score = 27.5 bits (58), Expect = 8.1
Identities = 31/121 (25%), Positives = 40/121 (33%), Gaps = 20/121 (16%)
Frame = +3
Query: 192 GPCSVPGCPSCLPRGP--CSVPGRPSCLPHFSTPLLLG*ICLVPKHRPS*PAPDYPIRRS 365
G C+ PG SC P P C V R CLP + C ++ P D ++
Sbjct: 975 GQCAYPG--SCNPNDPMSCDVRKRQQCLPRGNIYT-----CQCGRNEKRHPITDICLKNE 1027
Query: 366 CSQVGRRCSRS------------------LPHCSRPCYLPRRPCHRVLPLCPGSQNRSSP 491
C C RS + H P P R C + C NR SP
Sbjct: 1028 CLTGEHDCDRSARCIDTDESYICACQSGFIDHSPNPSERPGRVCVALQNECLDGSNRCSP 1087
Query: 492 S 494
+
Sbjct: 1088 N 1088
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 174 PCSLPRGP-CSVPGCPSCLPRGPCSVPGRPSCLP 272
P S RG C P PS PR PC P R C P
Sbjct: 2494 PDSSQRGRVCEPPPPPSPPPRHPCQDPERNDCHP 2527
Score = 27.5 bits (58), Expect = 8.1
Identities = 31/121 (25%), Positives = 40/121 (33%), Gaps = 20/121 (16%)
Frame = +3
Query: 192 GPCSVPGCPSCLPRGP--CSVPGRPSCLPHFSTPLLLG*ICLVPKHRPS*PAPDYPIRRS 365
G C+ PG SC P P C V R CLP + C ++ P D ++
Sbjct: 1559 GQCAYPG--SCNPNDPMSCDVRKRQQCLPRGNIYT-----CQCGRNEKRHPITDICLKNE 1611
Query: 366 CSQVGRRCSRS------------------LPHCSRPCYLPRRPCHRVLPLCPGSQNRSSP 491
C C RS + H P P R C + C NR SP
Sbjct: 1612 CLTGEHDCDRSARCIDTDESYICACQSGFIDHSPNPSERPGRVCVALQNECLDGSNRCSP 1671
Query: 492 S 494
+
Sbjct: 1672 N 1672
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 174 PCSLPRGP-CSVPGCPSCLPRGPCSVPGRPSCLP 272
P S RG C P PS PR PC P R C P
Sbjct: 1910 PDSSQRGRVCEPPPPPSPPPRHPCQDPERNDCHP 1943
Score = 27.5 bits (58), Expect = 8.1
Identities = 31/121 (25%), Positives = 40/121 (33%), Gaps = 20/121 (16%)
Frame = +3
Query: 192 GPCSVPGCPSCLPRGP--CSVPGRPSCLPHFSTPLLLG*ICLVPKHRPS*PAPDYPIRRS 365
G C+ PG SC P P C V R CLP + C ++ P D ++
Sbjct: 975 GQCAYPG--SCNPNDPMSCDVRKRQQCLPRGNIYT-----CQCGRNEKRHPITDICLKNE 1027
Query: 366 CSQVGRRCSRS------------------LPHCSRPCYLPRRPCHRVLPLCPGSQNRSSP 491
C C RS + H P P R C + C NR SP
Sbjct: 1028 CLTGEHDCDRSARCIDTDESYICACQSGFIDHSPNPSERPGRVCVALQNECLDGSNRCSP 1087
Query: 492 S 494
+
Sbjct: 1088 N 1088
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 174 PCSLPRGP-CSVPGCPSCLPRGPCSVPGRPSCLP 272
P S RG C P PS PR PC P R C P
Sbjct: 2494 PDSSQRGRVCEPPPPPSPPPRHPCQDPERNDCHP 2527
Score = 27.5 bits (58), Expect = 8.1
Identities = 31/121 (25%), Positives = 40/121 (33%), Gaps = 20/121 (16%)
Frame = +3
Query: 192 GPCSVPGCPSCLPRGP--CSVPGRPSCLPHFSTPLLLG*ICLVPKHRPS*PAPDYPIRRS 365
G C+ PG SC P P C V R CLP + C ++ P D ++
Sbjct: 1559 GQCAYPG--SCNPNDPMSCDVRKRQQCLPRGNIYT-----CQCGRNEKRHPITDICLKNE 1611
Query: 366 CSQVGRRCSRS------------------LPHCSRPCYLPRRPCHRVLPLCPGSQNRSSP 491
C C RS + H P P R C + C NR SP
Sbjct: 1612 CLTGEHDCDRSARCIDTDESYICACQSGFIDHSPNPSERPGRVCVALQNECLDGSNRCSP 1671
Query: 492 S 494
+
Sbjct: 1672 N 1672
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 126 AP*PASAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRP 260
AP P AP +P P C C P+GP VPG P
Sbjct: 139 APGPDGAPGRPGTTPNASCIPERVFEPPPCLPC-PQGPAGVPGHP 182
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 174 PCSLPRGP-CSVPGCPSCLPRGPCSVPGRPSCLP 272
P S RG C P PS PR PC P R C P
Sbjct: 2494 PDSSQRGRVCEPPPPPSPPPRHPCQDPERNDCHP 2527
Score = 27.5 bits (58), Expect = 8.1
Identities = 31/121 (25%), Positives = 40/121 (33%), Gaps = 20/121 (16%)
Frame = +3
Query: 192 GPCSVPGCPSCLPRGP--CSVPGRPSCLPHFSTPLLLG*ICLVPKHRPS*PAPDYPIRRS 365
G C+ PG SC P P C V R CLP + C ++ P D ++
Sbjct: 1559 GQCAYPG--SCNPNDPMSCDVRKRQQCLPRGNIYT-----CQCGRNEKRHPITDICLKNE 1611
Query: 366 CSQVGRRCSRS------------------LPHCSRPCYLPRRPCHRVLPLCPGSQNRSSP 491
C C RS + H P P R C + C NR SP
Sbjct: 1612 CLTGEHDCDRSARCIDTDESYICACQSGFIDHSPNPSERPGRVCVALQNECLDGSNRCSP 1671
Query: 492 S 494
+
Sbjct: 1672 N 1672
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGCPSCL-PRGPCSVPGRPSCLPHFSTP 287
AP C C P G PG P PRGP + G+P L + P
Sbjct: 129 APPPGTNACQKC--PTGAPGPPGLPGPKGPRGPAGIEGKPGRLGEDNRP 175
>AC006772-3|AAF60608.1| 85|Caenorhabditis elegans Hypothetical
protein Y46D2A.3 protein.
Length = 85
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 348 YPIRRSCSQVGRRCSRSLPHCSRPCYLPRRPCHRVLPLCPG 470
YPIR CS +R P +RPC PR C CPG
Sbjct: 39 YPIRCKCSGPTKR---KAPCANRPCPFPRTTC------CPG 70
>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
B0416.1 protein.
Length = 1203
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 109 KRLQRESSAREQPGVQLSTPRPKR 38
KRL+RE + + G + STPRP R
Sbjct: 1138 KRLKREKDQQSESGSKPSTPRPPR 1161
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Frame = +3
Query: 123 CAP*PASAPRCQARCCYPCSLPRGPCSVPGCPS------CLPRGPCSVPGRPSC 266
C P P AP CC P P PC P P C + P VP P C
Sbjct: 100 CGPSPVPAP-----CCPPPPAPAAPCCPPPPPPTPSPLVCCKQAP--VPENPCC 146
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 8/42 (19%)
Frame = +3
Query: 165 CCYPCSLPR-GPCS-------VPGCPSCLPRGPCSVPGRPSC 266
CC C P+ C P CP C P PC P C
Sbjct: 34 CCCGCGTPQPASCGCAPACPQAPSCPVCPPPQPCPAPPAAYC 75
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +3
Query: 123 CAP*PASAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSCLP 272
C P P AP + P P P PG P P+ PC P C P
Sbjct: 103 CQPGPQGAPGAPGKPGRP-GKPGAP-GFPGNPGKAPQKPCEEITPPPCKP 150
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +3
Query: 123 CAP*PASAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSCLP 272
C P P AP + P P P PG P P+ PC P C P
Sbjct: 103 CQPGPQGAPGAPGKPGRP-GKPGAP-GFPGNPGKAPQKPCEEITPPPCKP 150
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +3
Query: 168 CYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSCLPHFSTPLLLG 299
C C P+GP PG P GP +PG P + S P L G
Sbjct: 181 CIQC--PQGPQGPPGAVG--PCGPSGIPGLPGNPGYTSPPGLPG 220
>AF022981-1|AAG24206.1| 455|Caenorhabditis elegans Hypothetical
protein W03F9.1 protein.
Length = 455
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 213 CPSCLPRGPCSVPGRPSCLPHFSTPLLLG*IC 308
CP+C GP V +P+ +P F T +++ C
Sbjct: 247 CPNC--HGPTEVKMKPTDIPFFQTVIIMSLAC 276
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = +3
Query: 141 SAPRCQARCCYPCSLPRGPCSVPGCPS-CLP--RGPCSVPGRP 260
S R + Y + G S GC + CLP GP PG+P
Sbjct: 72 SGNRTARQAGYDAGVTGGAASAGGCDACCLPGAAGPAGTPGKP 114
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = +3
Query: 141 SAPRCQARCCYPCSLPRGPCSVPGCPS-CLP--RGPCSVPGRP 260
S R + Y + G S GC + CLP GP PG+P
Sbjct: 72 SGNRTARQAGYDAGVTGGSASAGGCDACCLPGAAGPAGTPGKP 114
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = +3
Query: 141 SAPRCQARCCYPCSLPRGPCSVPGCPS-CLP--RGPCSVPGRP 260
S R + Y + G S GC + CLP GP PG+P
Sbjct: 72 SGNRTARQAGYDAGVTGGSASAGGCDACCLPGAAGPAGTPGKP 114
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = +3
Query: 135 PASAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSCLPHFSTP 287
P + P + C P GP G P+GP PG+P H P
Sbjct: 136 PINCPTAPSDCIKCAPGPAGPAGSAGPAG--PKGPDGRPGQPGSAGHPGAP 184
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 27.5 bits (58), Expect = 8.1
Identities = 32/129 (24%), Positives = 43/129 (33%), Gaps = 4/129 (3%)
Frame = +3
Query: 141 SAPRCQARCCYPCSLPRGPCSVPGCPSCLPRGPCSVPGRPSCLPHFSTPLLLG*ICLVPK 320
SAP CQ +C C P SC C P C STP C
Sbjct: 94 SAPVCQQQCAPQCQQQFAPACQQCQNSCQQTQQCQQQCTPQC-QQPSTPQCQQ--CQSAC 150
Query: 321 HRPS*PAPDYP--IRRSCSQVGRRCSRSLPHCSRPCYLPRRPCHRVLPLCPG--SQNRSS 488
P+ AP + S SQ + + C + C ++ + C SQ+ S
Sbjct: 151 QAPATAAPQISLNLEASVSQSAQCEPQCQQSCQQQCVQQQQSMQQCASACTKSCSQSCSQ 210
Query: 489 PS*GDCLPQ 515
P+ C Q
Sbjct: 211 PAQMPCQTQ 219
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 27.5 bits (58), Expect = 8.1
Identities = 28/111 (25%), Positives = 40/111 (36%), Gaps = 5/111 (4%)
Frame = +3
Query: 162 RCCYPCSLP-RGPC--SVPGCPS-CLPRGPCSVPGRPSCLPHFSTPLLLG*ICLVPKHRP 329
+C PC++ + C +VP C C P+ C P P C +T +C +
Sbjct: 316 QCIQPCTVECQTACQQAVPQCQQQCAPQ--CYQPSAPQCQQCQNTCQQFAPVC----QQQ 369
Query: 330 S*PAPDYPIRRSCSQVGRRCSRSLPHCSRPCYLPRRPCHR-VLPLCPGSQN 479
P C Q C + P C + C CH+ P C QN
Sbjct: 370 CASQCLQPAAPQCQQCQNTCQQFAPVCEQQC---ASLCHQPSAPQCQQCQN 417
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = +3
Query: 141 SAPRCQARCCYPCSLPRGPCSVPGCPS-CLP--RGPCSVPGRP 260
S R + Y + G S GC + CLP GP PG+P
Sbjct: 72 SGNRTARQAGYDAGVTGGSASAGGCDACCLPGAAGPAGTPGKP 114
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = +3
Query: 141 SAPRCQARCCYPCSLPRGPCSVPGCPS-CLP--RGPCSVPGRP 260
S R + Y + G S GC + CLP GP PG+P
Sbjct: 72 SGNRTARQAGYDAGVTGGSASAGGCDACCLPGAAGPAGTPGKP 114
>AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (grd
related) protein 5 protein.
Length = 220
Score = 27.5 bits (58), Expect = 8.1
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 403 HTAPAPVTYHAAPATVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGDNKSQ 570
+ APAP + A PA + SAP IVA + A P ++ + V D +G ++S+
Sbjct: 80 YAAPAP--FAAQPAQFAVQSAPPQPIVAPPPQAYAAP-HKRHVDVMDIDTGVDQSE 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.124 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,590,287
Number of Sequences: 27780
Number of extensions: 234681
Number of successful extensions: 767
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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