Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5243
         (500 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...   133   3e-33
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   1.1  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   5.8  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    23   5.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.7  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score =  133 bits (322), Expect = 3e-33
 Identities = 68/167 (40%), Positives = 99/167 (59%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2    WDTPVSQEIAMTWSNFIKTLTHLNELRIPRQIRGSNTQFIELHIFTDASQNAYGACAYIR 181
            WD  + Q++   W  F + LTHL E+++PR +     + I++H F DAS+  YGAC Y+R
Sbjct: 1005 WDEEIPQQMRQEWEVFERQLTHLQEVQVPRCVTIVGARNIQIHGFCDASEEGYGACVYVR 1064

Query: 182  TYNLNTEITVRLLCAKSRVAPLKT-ISIPRLELCGALLGARLYKKIINSLKLSFTNTCFW 358
            + N   EI  RL  +KS+V PL T  +I RLELC A L  +L  K+  + +  +   C W
Sbjct: 1065 STN-GEEIVSRLFVSKSKVTPLATKHTIARLELCAAHLLGKLLVKLKRATEDPYETFC-W 1122

Query: 359  TDSTIVMGWIRMSPHLLKTFVQNRVTELNELTGDSVWLHVNSKNNPA 499
            TDS+ V+ W++ SP   KTFV NRV+++   T +  W HV   +NPA
Sbjct: 1123 TDSSTVIYWLKSSPSRWKTFVANRVSQIQNATKEFEWRHVPGIHNPA 1169


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 209 VRLLCAKSRVAPLKTISIPRLELCGALLGARLYKKIINSLKLSFT-NTCFWTDS 367
           VR L    +V PL T  +P+L    ++ GAR     ++  K++ T NT  W  S
Sbjct: 779 VRDLNVVQKVVPLNTFLLPKLWFVASVCGAR----AMDIAKVTCTVNTFLWDGS 828


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +1

Query: 346 HLFLDGFDYRNGLDTHVTSFI-KNL 417
           H  L+ F YR+ LDTH+ S   KNL
Sbjct: 121 HGNLNRFGYRDILDTHLLSHARKNL 145


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +2

Query: 38  WSNFIKTLTHLNELRIPRQIRGSNTQFI 121
           W+   KT+   +  R+  +++G N +F+
Sbjct: 304 WNKIAKTMDEEDVRRLMSRVKGKNREFL 331


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 302  LYKKIINSLKLSFTNTCFWTDSTIVM 379
            L K +    K+ FTN   W D  IVM
Sbjct: 1355 LIKWLALGFKVYFTNAWCWLDFIIVM 1380


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,549
Number of Sequences: 2352
Number of extensions: 10590
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)