Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5241
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80667-1|AAB38966.1|  382|Drosophila melanogaster opsin protein.       30   2.1  
U67905-1|AAC47426.1|  382|Drosophila melanogaster rhodopsin 5 pr...    30   2.1  
AY069237-1|AAL39382.1|  382|Drosophila melanogaster GH28578p pro...    30   2.1  
AE014134-2131|AAF53145.1|  382|Drosophila melanogaster CG5279-PA...    30   2.1  
X03431-1|CAA27159.1|  414|Drosophila melanogaster protein ( Dros...    29   5.0  
L33401-1|AAA28449.1|  360|Drosophila melanogaster Delilah protein.     28   8.7  
BT003640-1|AAO39644.1|  384|Drosophila melanogaster AT16005p pro...    28   8.7  
AY051581-1|AAK93005.1|  384|Drosophila melanogaster GH22991p pro...    28   8.7  
AE014297-3947|AAF56590.1|  384|Drosophila melanogaster CG5441-PA...    28   8.7  

>U80667-1|AAB38966.1|  382|Drosophila melanogaster opsin protein.
          Length = 382

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -1

Query: 265 GNEIVVGVF*NESKLNVPFSLFGLFAKIYPLFYCSAKEKKKICRVVGHRIG 113
           GN +V+ +F     L  P +L  L   I+ LF C+      I   VG+ +G
Sbjct: 69  GNGLVIWIFSTSKSLRTPSNLLILNLAIFDLFMCTNMPHYLINATVGYIVG 119


>U67905-1|AAC47426.1|  382|Drosophila melanogaster rhodopsin 5
           protein.
          Length = 382

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -1

Query: 265 GNEIVVGVF*NESKLNVPFSLFGLFAKIYPLFYCSAKEKKKICRVVGHRIG 113
           GN +V+ +F     L  P +L  L   I+ LF C+      I   VG+ +G
Sbjct: 69  GNGLVIWIFSTSKSLRTPSNLLILNLAIFDLFMCTNMPHYLINATVGYIVG 119


>AY069237-1|AAL39382.1|  382|Drosophila melanogaster GH28578p
           protein.
          Length = 382

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -1

Query: 265 GNEIVVGVF*NESKLNVPFSLFGLFAKIYPLFYCSAKEKKKICRVVGHRIG 113
           GN +V+ +F     L  P +L  L   I+ LF C+      I   VG+ +G
Sbjct: 69  GNGLVIWIFSTSKSLRTPSNLLILNLAIFDLFMCTNMPHYLINATVGYIVG 119


>AE014134-2131|AAF53145.1|  382|Drosophila melanogaster CG5279-PA
           protein.
          Length = 382

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -1

Query: 265 GNEIVVGVF*NESKLNVPFSLFGLFAKIYPLFYCSAKEKKKICRVVGHRIG 113
           GN +V+ +F     L  P +L  L   I+ LF C+      I   VG+ +G
Sbjct: 69  GNGLVIWIFSTSKSLRTPSNLLILNLAIFDLFMCTNMPHYLINATVGYIVG 119


>X03431-1|CAA27159.1|  414|Drosophila melanogaster protein (
           Drosophila melanogastertransposable element 297. ).
          Length = 414

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 182 ISAILLLRERKKKDLSCRGTPNRNEGAYYKNINFKFYSRYKENN 51
           I    +L      DL    T  +NEG Y ++INF+FY + +  N
Sbjct: 162 IQLFTILAHHDITDLRSLITIAQNEGIYEEHINFEFYEKPEYRN 205


>L33401-1|AAA28449.1|  360|Drosophila melanogaster Delilah protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -2

Query: 564 TYKQNYVGSCLVESINKVRARVDL 493
           +Y+  ++G CL ES N+  ARVDL
Sbjct: 161 SYESEFIGECLEESANR-EARVDL 183


>BT003640-1|AAO39644.1|  384|Drosophila melanogaster AT16005p
           protein.
          Length = 384

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -2

Query: 564 TYKQNYVGSCLVESINKVRARVDL 493
           +Y+  ++G CL ES N+  ARVDL
Sbjct: 161 SYESEFIGECLEESANR-EARVDL 183


>AY051581-1|AAK93005.1|  384|Drosophila melanogaster GH22991p
           protein.
          Length = 384

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -2

Query: 564 TYKQNYVGSCLVESINKVRARVDL 493
           +Y+  ++G CL ES N+  ARVDL
Sbjct: 161 SYESEFIGECLEESANR-EARVDL 183


>AE014297-3947|AAF56590.1|  384|Drosophila melanogaster CG5441-PA
           protein.
          Length = 384

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -2

Query: 564 TYKQNYVGSCLVESINKVRARVDL 493
           +Y+  ++G CL ES N+  ARVDL
Sbjct: 161 SYESEFIGECLEESANR-EARVDL 183


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,080,052
Number of Sequences: 53049
Number of extensions: 419946
Number of successful extensions: 855
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)