Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5239
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 97 5e-21
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 79 2e-15
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 69 2e-12
AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase pro... 67 6e-12
Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical pr... 63 1e-10
Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 62 3e-10
Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical p... 60 1e-09
Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 56 2e-08
Z54342-4|CAA91150.1| 447|Caenorhabditis elegans Hypothetical pr... 54 5e-08
Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical p... 50 1e-06
Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical ... 44 5e-05
Z54342-9|CAA91153.1| 399|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z78412-8|CAB01653.1| 400|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z47745-1|CAA87663.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.040
AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical... 33 0.16
Z81099-2|CAB03188.2| 297|Caenorhabditis elegans Hypothetical pr... 31 0.65
AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical ... 30 0.86
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 29 2.6
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 2.6
U41553-2|AAA83292.1| 476|Caenorhabditis elegans Hypothetical pr... 28 3.5
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 27 8.0
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 8.0
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF101312-3|AAC69219.1| 83|Caenorhabditis elegans Ribosomal pro... 27 8.0
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 97.5 bits (232), Expect = 5e-21
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Frame = +1
Query: 118 CYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSEVLIIDP-ELDVDKSG--- 285
CYF+NWA YR G ++ ED LCTH++++F G V DP +L D +G
Sbjct: 57 CYFTNWAQYRQGRAKFVPEDYTPGLCTHILFAF-GWMNADYTVRAYDPADLPNDWAGEGM 115
Query: 286 FRNFTSLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLD 465
+R L+ +K +++ GGW+ G + + M A ++R FI S + F++ + FDG+D
Sbjct: 116 YRRVNKLKVTDTQLKTLLSFGGWSFGTALFQGMAASSASRKVFIDSAITFVRTWGFDGID 175
Query: 466 LDWEYP-GAAD 495
+DWEYP GA D
Sbjct: 176 IDWEYPSGATD 186
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 79.0 bits (186), Expect = 2e-15
Identities = 40/109 (36%), Positives = 59/109 (54%)
Frame = +1
Query: 157 GRYGIEDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSLRSKHPDVKFM 336
G++ D + THL+++F V S L E D K+ + + S+HPD+K +
Sbjct: 42 GKHPFRDDQAEKLTHLVFAFFVVDSDGSVKL----EGDAAKARLEHVKEVASRHPDLKLL 97
Query: 337 VAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYP 483
AVGGW E +S + A S R I + V +K+Y FDG+D+DWEYP
Sbjct: 98 YAVGGW-ENSQYFSVLTADHSRRSILISNFVKVIKEYGFDGVDIDWEYP 145
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
T01C4.1 protein.
Length = 1484
Score = 68.9 bits (161), Expect = 2e-12
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Frame = +1
Query: 85 VQCADSRARIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGV----TEKSSEVLI 252
V A RIV Y++ W G I + + TH+I++F+ + + K V
Sbjct: 949 VPAASCGKRIVGYYTGW-------GEREITENQLKKLTHVIFAFVAMYADGSVKFGPVSA 1001
Query: 253 IDPELDVDKSGFRNFTSLRSK----HPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIR 420
DP K R F ++ K + V+ + AVGGW + +S + A R +F+
Sbjct: 1002 DDPGPQAGKKAERRFVDMKKKARAVNSGVRVLFAVGGW-DNSQYFSSVAADSGKRRNFVD 1060
Query: 421 SVVDFLKKYDFDGLDLDWEYP 483
SV F++ + DG+DLDWEYP
Sbjct: 1061 SVASFIEHHKIDGVDLDWEYP 1081
>AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase
protein.
Length = 117
Score = 67.3 bits (157), Expect = 6e-12
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Frame = +1
Query: 133 WAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSEVLIIDP-ELDVDKSG---FRNFT 300
WA YR G ++ ED LCTH++++F G V DP +L D +G +R
Sbjct: 1 WAQYRQGRAKFVPEDYTPGLCTHILFAF-GWMNADYTVRAYDPADLPNDWAGEGMYRRVN 59
Query: 301 SLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDW 474
L+ +K +++ GG + G + + M A ++R FI S ++ + FDG+DLDW
Sbjct: 60 KLKVTDTQLKTLLSFGGCSFGTALFQGMAASSASRKVFIDSATTSVRTWGFDGIDLDW 117
>Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical
protein R09D1.8 protein.
Length = 446
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +1
Query: 184 VDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSL-RSKHPDVKFMVAVGGWAE 360
V TH +++F+ +T S L ID D+ K+ F N + + + P VK M+++GG +
Sbjct: 104 VSKLTHAVFAFVNMT--SDGHLQIDG--DLAKNRFTNLIEIAKQQTPQVKVMISIGG-ND 158
Query: 361 GGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADR 498
+ + +++ + FI S V FL+ YD DG+DL W++PG +
Sbjct: 159 NSNNFKPVLSSPDRKKLFINSTVSFLQTYDIDGVDLYWKWPGKTSK 204
>Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical
protein R09D1.6 protein.
Length = 444
Score = 61.7 bits (143), Expect = 3e-10
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = +1
Query: 184 VDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSL-RSKHPDVKFMVAVGGWAE 360
V TH +++F+ +T S L ID D+ K+ F N + + + P VK M+++GG +
Sbjct: 102 VSKLTHAVFAFVNMT--SDGHLQIDG--DLAKNRFTNLIEIAKQQTPQVKVMISIGG-ND 156
Query: 361 GGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADR 498
+ + ++ + FI S V FL+ YD DG+DL W++PG +
Sbjct: 157 NSNNFKPGLSSPDRKKLFINSTVSFLQTYDIDGVDLYWKWPGKTSK 202
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 61.7 bits (143), Expect = 3e-10
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Frame = +1
Query: 109 RIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSS----EVLIIDPELDVD 276
RIV Y++ W G I + + TH+I++F+ + E S V D
Sbjct: 1494 RIVGYYTGW-------GDREITENQLKKLTHVIFAFVAMYEDGSVKFGAVSEDDSGPQAA 1546
Query: 277 KSGFRNFTSLRSK----HPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKK 444
K R F +++ K + V+ + AVGGW + +S + A R F+ S+ F++
Sbjct: 1547 KKAERRFLNMKKKARAANSGVRVLFAVGGW-DNSQYFSSVAADSGKRKKFVDSIASFVED 1605
Query: 445 YDFDGLDLDWEYP 483
DG+DLDWEYP
Sbjct: 1606 QKIDGVDLDWEYP 1618
>Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 59.7 bits (138), Expect = 1e-09
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Frame = +1
Query: 64 LASCAALVQCADSRARIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSE 243
L CA + A+S +C Y G G I + TH +++F+ +T +
Sbjct: 53 LGLCAQIYFQAESDVLPICD-KRIIGYYSGSGTSNITSTQLSNLTHTVFAFVYMTPDGT- 110
Query: 244 VLIIDPELDVDKSGFRNFTSL-RSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRM-SFI 417
L+ + + ++K+ F + R+ + +K M ++GG + SKY V R+ +FI
Sbjct: 111 -LLFNNQ--IEKNRFLKLKEVVRNGNSKIKLMFSIGG--KDNSKYFSSVIPSEERIQTFI 165
Query: 418 RSVVDFLKKYDFDGLDLDWEYPGAADRGGSFS 513
S+++FL+ YD DG+DL W++P R F+
Sbjct: 166 ESILEFLEAYDLDGVDLFWKWPEEEYRDAYFA 197
>Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 59.7 bits (138), Expect = 1e-09
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Frame = +1
Query: 64 LASCAALVQCADSRARIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSE 243
L CA + A+S +C Y G G I + TH +++F+ +T +
Sbjct: 53 LGLCAQIYFQAESDVLPICD-KRIIGYYSGSGTSNITSTQLSNLTHTVFAFVYMTPDGT- 110
Query: 244 VLIIDPELDVDKSGFRNFTSL-RSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRM-SFI 417
L+ + + ++K+ F + R+ + +K M ++GG + SKY V R+ +FI
Sbjct: 111 -LLFNNQ--IEKNRFLKLKEVVRNGNSKIKLMFSIGG--KDNSKYFSSVIPSEERIQTFI 165
Query: 418 RSVVDFLKKYDFDGLDLDWEYPGAADRGGSFS 513
S+++FL+ YD DG+DL W++P R F+
Sbjct: 166 ESILEFLEAYDLDGVDLFWKWPEEEYRDAYFA 197
>Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical
protein R09D1.10 protein.
Length = 450
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/101 (28%), Positives = 54/101 (53%)
Frame = +1
Query: 196 THLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSLRSKHPDVKFMVAVGGWAEGGSKY 375
TH +++F+ + + V+ D R+ + S P +K ++++GG A + +
Sbjct: 104 THAVFAFV-IMKSDGTVMFRDKLAQERFLKIRDIANQAS--PKLKMLISIGGPANSDN-F 159
Query: 376 SHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADR 498
+++ + FI S+V FLKKYD DG+DL W++P D+
Sbjct: 160 LPVISSPDRKKIFINSIVSFLKKYDIDGVDLFWKWPRLEDK 200
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 55.6 bits (128), Expect = 2e-08
Identities = 33/115 (28%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Frame = +1
Query: 166 GIEDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSLRSKHPD----VKF 333
G+ + + TH+IY F ++ + I+D D+S R F ++S + +K
Sbjct: 130 GLTRKQLQMLTHIIYLF--AIPRNGVITIVD-----DRS-LRKFEEMKSNAREASSTLKI 181
Query: 334 MVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADR 498
M+++GG S +S +V +++R F+ S+V F++KYD DG+++ W +P D+
Sbjct: 182 MISIGGHYNSRS-FSGLVFNETSRTVFVNSIVSFVEKYDIDGIEMFWMWPRYRDK 235
>Z54342-4|CAA91150.1| 447|Caenorhabditis elegans Hypothetical
protein C08H9.7 protein.
Length = 447
Score = 54.4 bits (125), Expect = 5e-08
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Frame = +1
Query: 184 VDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTS-LRSKHPDVKFMVAVGGWAE 360
+ + TH+IY F T + V+ +D E K F+ S R VK M++VGG
Sbjct: 118 LQMVTHIIYLFARPT---NGVMTLDGERTRRK--FQEMRSKAREVSSTVKVMISVGGHDH 172
Query: 361 GGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAAD 495
G+ +S +++ +++R FI+S+V F+K D DG+++ W +P D
Sbjct: 173 SGA-FSAIMSNEASRSVFIKSIVSFVKNEDIDGIEIFWMWPKHRD 216
>Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical
protein C08H9.12 protein.
Length = 460
Score = 54.0 bits (124), Expect = 6e-08
Identities = 29/104 (27%), Positives = 55/104 (52%)
Frame = +1
Query: 184 VDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSLRSKHPDVKFMVAVGGWAEG 363
+ + TH+IY F K+ + D +N R + +K M+++GG
Sbjct: 131 LQMLTHIIYLF--AIPKNGSLTFRDESSRRKFVAMKN--EARKESSTLKVMISIGGQYSS 186
Query: 364 GSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAAD 495
G ++S +V+++++R F S+V F++ YD DG+D+ W +P +D
Sbjct: 187 G-EFSGLVSKETSRNLFTNSIVSFVQNYDIDGVDIFWTWPKYSD 229
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 54.0 bits (124), Expect = 6e-08
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +1
Query: 166 GIEDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTS-LRSKHPDVKFMVA 342
G+ + + TH+IY F T + V+ +D E K F S R +K M++
Sbjct: 124 GLSRKQLHMLTHIIYLFARPT---NGVITLDGEQTRRK--FEEMKSKAREASSTLKVMIS 178
Query: 343 VGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAAD 495
VGG + +YS +V+ +++R F++S+V F KK D DG+++ W P D
Sbjct: 179 VGGH-DYYKEYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYED 228
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 54.0 bits (124), Expect = 6e-08
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = +1
Query: 169 IEDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDK-SGFRNFTSLRSKHPDVKFMVAV 345
I + V TH +++F+ + S L + + + D+ ++ ++ + VK M+++
Sbjct: 85 ITSVQVSKLTHAVFAFVYMN--SDGTLKFEKQDEEDRFMQLKDIVNMGTS--PVKIMISI 140
Query: 346 GGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYP 483
GG E +S ++ + R FI S++ FLK+ D DG+DL WE+P
Sbjct: 141 GG-KENSQNFSPVIESEYRRQIFINSILTFLKENDLDGIDLFWEWP 185
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 53.6 bits (123), Expect = 8e-08
Identities = 28/111 (25%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Frame = +1
Query: 169 IEDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSL-RSKHPDVKFMVAV 345
I + V TH +++F+ +T+ + +I ++ F + T + + + P VK M+++
Sbjct: 25 ITEDQVSKLTHAVFAFVNMTQGGNLNII-------NRQRFLSLTKIAKQQTPPVKVMISI 77
Query: 346 GGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADR 498
GG + + + ++ + R F+ + FL+ Y DG+DL W++PG A +
Sbjct: 78 GG-DDNSNNFYKVLNSPNRRKVFLNATTSFLQIYGIDGIDLFWKWPGGASK 127
>Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical
protein C08H9.10 protein.
Length = 457
Score = 52.8 bits (121), Expect = 1e-07
Identities = 21/63 (33%), Positives = 41/63 (65%)
Frame = +1
Query: 307 RSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPG 486
R + +K M+++GG + S +S +V+ +++R F+ S+V F++KYD DG+++ W +P
Sbjct: 166 RKANSTLKVMISIGGQSNSRS-FSRLVSNETSRNVFVNSIVSFVQKYDIDGIEIFWTWPK 224
Query: 487 AAD 495
D
Sbjct: 225 YED 227
>U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical
protein C45E5.2 protein.
Length = 469
Score = 51.6 bits (118), Expect = 3e-07
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +1
Query: 277 KSGFRNFT-SLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDF 453
K F+N+ ++++ +VK M+++G W S ++ KS RM FI S+VDFLK++
Sbjct: 58 KRKFKNWQRAVKNSSSNVKSMISIGRWDSVTQLSSVLLNVKSRRM-FIESIVDFLKEHQL 116
Query: 454 DGLDLDWEY 480
DG+DL W +
Sbjct: 117 DGIDLFWRW 125
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 196 THLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSL-RSKHPDVKFMVAVGGWAEGGSK 372
TH ++ F+ + + D D K F+N L + ++ +VK M ++GGWA+ +
Sbjct: 396 THAVFGFLYLKTNGT----FDILNDRGKGRFKNLNRLIKYENLNVKMMFSIGGWADSTNF 451
Query: 373 YSHMVAQKSTRMSFI 417
S + K R +
Sbjct: 452 RSVVADVKIKRFEIL 466
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 51.2 bits (117), Expect = 4e-07
Identities = 26/103 (25%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Frame = +1
Query: 196 THLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSLRSKHPD--VKFMVAVGGWAEGGS 369
TH ++ F+ +T+ D +L++ + F L+SK + M+++GG+ E +
Sbjct: 86 THAVFRFVSMTD--------DGQLEMSERAKERFKDLKSKVKNSMTMLMISIGGF-ENSN 136
Query: 370 KYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADR 498
+S ++ + + FI+S++ FL ++ DG+D+ W++P +R
Sbjct: 137 YFSSVLEDEQKKSIFIKSILSFLIEHKIDGVDIFWKWPKLGNR 179
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 51.2 bits (117), Expect = 4e-07
Identities = 26/103 (25%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Frame = +1
Query: 196 THLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSLRSKHPD--VKFMVAVGGWAEGGS 369
TH ++ F+ +T+ D +L++ + F L+SK + M+++GG+ E +
Sbjct: 86 THAVFRFVSMTD--------DGQLEMSERAKERFKDLKSKVKNSMTMLMISIGGF-ENSN 136
Query: 370 KYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADR 498
+S ++ + + FI+S++ FL ++ DG+D+ W++P +R
Sbjct: 137 YFSSVLEDEQKKSIFIKSILSFLIEHKIDGVDIFWKWPKLGNR 179
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 50.8 bits (116), Expect = 6e-07
Identities = 29/106 (27%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = +1
Query: 184 VDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSL-RSKHPDVKFMVAVGGWAE 360
V TH I++F+ +T + V +K+ F ++ ++++ VKFM ++GG
Sbjct: 112 VSKLTHAIFAFVQLTFDGTLVFR-------NKNRFMALRNIAKTENSTVKFMFSIGGPGH 164
Query: 361 GGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADR 498
+S +V + + FI+S+ FL+++ DG+D+ W++P AD+
Sbjct: 165 S-QNFSPVVRNQEKKRRFIKSIFSFLEEHKLDGVDIFWKWPHLADK 209
>Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical
protein ZK938.6 protein.
Length = 460
Score = 50.8 bits (116), Expect = 6e-07
Identities = 20/65 (30%), Positives = 41/65 (63%)
Frame = +1
Query: 301 SLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEY 480
++R +K M+++GG G ++S +V+ +++R F+ S+ F++ YD DG+D+ W +
Sbjct: 166 NVRKASSTLKVMISIGGQYNSG-EFSGLVSNETSRNLFVNSIATFVRDYDIDGVDIFWTW 224
Query: 481 PGAAD 495
P +D
Sbjct: 225 PKHSD 229
>Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical
protein R09D1.14 protein.
Length = 150
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +1
Query: 196 THLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSL-RSKHPDVKFMVAVGGWAEGGSK 372
TH +++F+ +T S L ID D+ K+ F N + + + P VK M+++GG + +
Sbjct: 66 THAVFAFVNIT--SDGQLQIDG--DLAKNRFTNLIEIAKQQTPQVKVMISIGG-NDNSNN 120
Query: 373 YSHMVAQKSTRMSFIRSVVDFLKKYDFDGL 462
+ +++ + FI S V FL+ YD DG+
Sbjct: 121 FKPVLSSPDRKKLFINSTVSFLQTYDIDGV 150
>Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical
protein R09D1.3 protein.
Length = 435
Score = 49.6 bits (113), Expect = 1e-06
Identities = 25/101 (24%), Positives = 52/101 (51%)
Frame = +1
Query: 196 THLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSLRSKHPDVKFMVAVGGWAEGGSKY 375
TH +++F+ + + + L ++ F + RS H ++K M ++GG E +
Sbjct: 99 THAVFAFVDIKYDGT---LQFKNLITEQKFFSLKSKARSLHSNLKLMFSIGG-DENSFDF 154
Query: 376 SHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADR 498
S +A + + I S++ F+ + DG+DL W++P + D+
Sbjct: 155 SSALANTQMKSTLITSIIAFIHSHMIDGVDLHWKWPTSRDK 195
>Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.13 protein.
Length = 459
Score = 46.8 bits (106), Expect = 9e-06
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +1
Query: 322 DVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAAD 495
+VK M ++GG + YS +VA + R FI S+V F+K + G+DL WE+P ++
Sbjct: 163 NVKVMFSIGGH-KNAEHYSTVVADSTKRSVFIDSIVSFIKSNNASGVDLFWEWPNISE 219
>Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical
protein R09D1.2 protein.
Length = 440
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +1
Query: 322 DVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADR 498
D K M ++GG A +S ++ + + FI S++ FLK+Y DG+DL W++ + D+
Sbjct: 148 DAKIMFSIGGPANT-QFFSPIIQNEEMKRKFIDSIIYFLKQYKLDGVDLFWKWSSSGDK 205
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/58 (31%), Positives = 37/58 (63%)
Frame = +1
Query: 325 VKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADR 498
+K M+++GG + S +S +++ + R S I S+V FL ++ DG+D+ W++ + D+
Sbjct: 136 LKVMISIGGM-DINSDFSLVISDEKKRRSLIESIVSFLTEHQIDGVDIFWKWSSSRDK 192
>AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical
protein T10D4.3 protein.
Length = 410
Score = 44.4 bits (100), Expect = 5e-05
Identities = 29/133 (21%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Frame = +1
Query: 106 ARIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSG 285
+RIV ++++W R I V TH +++++ + S + + D +
Sbjct: 54 SRIVGFYADWE-------RTDITSHQVAKLTHAVFAYVQMKFDGS----LGFKNDAARIR 102
Query: 286 FRNFTSL--RSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDG 459
F N R++ +VK M+++GG+ E + +++ + +F+ S+ FL ++ G
Sbjct: 103 FSNLRDKVRRNEDSNVKMMISIGGF-ENSQHFYPVLSNVEMKKAFLNSISSFLAYHELHG 161
Query: 460 LDLDWEYPGAADR 498
+D+ W++P D+
Sbjct: 162 VDIFWKWPSPEDK 174
>Z54342-9|CAA91153.1| 399|Caenorhabditis elegans Hypothetical
protein C08H9.14 protein.
Length = 399
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = +1
Query: 325 VKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADR 498
+K MV++GG+ E +S ++ +K ++ I S+ +KK+D DG+D+ W +P D+
Sbjct: 110 LKVMVSIGGY-ESSPLFSDVLVKKKKKL--IASIALLVKKFDLDGVDIFWNWPSITDQ 164
>Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical
protein C08H9.6 protein.
Length = 394
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +1
Query: 316 HPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAAD 495
+P++K MV + G K+ ++A+ + SFI+S+ F+ + FDG+D+ W +P D
Sbjct: 105 NPNLKIMVEING------KFFSVLAEDEKKNSFIKSISSFVVDHKFDGVDIFWSWPEDED 158
>U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical
protein C45E5.3 protein.
Length = 266
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/64 (28%), Positives = 40/64 (62%)
Frame = +1
Query: 301 SLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEY 480
++ + + VK M+++GG + + ++ +V+ ++ R FI S++ L +++ DG+DL W +
Sbjct: 3 TIENSNSIVKKMISIGG-CDYSTNFTSVVSNQTIRRVFIESIIALLIEHNLDGVDLFWRW 61
Query: 481 PGAA 492
AA
Sbjct: 62 VPAA 65
>Z78412-8|CAB01653.1| 400|Caenorhabditis elegans Hypothetical
protein M176.8 protein.
Length = 400
Score = 40.7 bits (91), Expect = 6e-04
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Frame = +1
Query: 103 RARIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKS 282
+ RIV YFS + I +D TH +++F+ + K L + D K+
Sbjct: 79 KRRIVGYFSE-------IESTEISKSQIDKLTHAVFAFVRI--KYDGTL----QFDNSKA 125
Query: 283 GFRNFTSLRSKH--PDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFD 456
R F+ L+ K +V+ MV++GG E ++ ++ + +FI S++ FL ++ D
Sbjct: 126 DLR-FSILKDKTRGSNVEMMVSIGGGYENAHYFASALSDSQKKKNFIDSILAFLVEHRID 184
Query: 457 GLD 465
G+D
Sbjct: 185 GVD 187
>Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical
protein R09D1.5 protein.
Length = 429
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/131 (19%), Positives = 61/131 (46%)
Frame = +1
Query: 103 RARIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKS 282
+ R+V Y+S W + G TH +++FI + + + + +K
Sbjct: 68 KKRVVGYYSEWEGTEITRSQLG-------KLTHAVFAFIHMDSEGKLQFKTNQKERFEKL 120
Query: 283 GFRNFTSLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGL 462
T++++ + D K M+++GG + +++ + FI S+ F++++ G+
Sbjct: 121 K----TAVKNANSDTKVMISIGG-DHNSENFGSVLSDSEKKSMFIDSIARFIRQHKIHGV 175
Query: 463 DLDWEYPGAAD 495
D+ W++ G ++
Sbjct: 176 DIYWKWLGNSE 186
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 36.7 bits (81), Expect = 0.010
Identities = 22/95 (23%), Positives = 45/95 (47%)
Frame = +1
Query: 196 THLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSLRSKHPDVKFMVAVGGWAEGGSKY 375
TH +++F + S +L P + K + + VK M+++GG E +
Sbjct: 118 THAVFAFAKMDYLRSLILRKSPRFEELKR------VAATSNSGVKIMISIGG-DENSQYF 170
Query: 376 SHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEY 480
S +++ + FI S++ F+ DG+D+ W++
Sbjct: 171 SSVLSDITMCKLFIESIIAFIHTNSIDGMDIHWKW 205
>Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical
protein T19H5.3 protein.
Length = 407
Score = 36.3 bits (80), Expect = 0.013
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Frame = +1
Query: 256 DPELDVDKSGFRNFTSLRSKHP----DVKFMVAVGGWAEGGSKYSHMV-AQKSTRMSFIR 420
D ++VD S R F+ L+ K K ++++GG +++ +V A + F +
Sbjct: 114 DGSVEVDHSS-RTFSKLKEKSKIESSHFKKLLSIGG--RSNTQFLPLVIADPRRKRRFFK 170
Query: 421 SVVDFLKKYDFDGLDLDWEY 480
S++ L++Y DG+DL W++
Sbjct: 171 SIISILEEYQLDGVDLLWKW 190
Score = 30.3 bits (65), Expect = 0.86
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 373 YSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWE 477
+S ++ + FI SV+ FLK+Y DL W+
Sbjct: 331 FSSVILAHDKKRKFINSVISFLKEYRLGNSDLIWK 365
>Z47745-1|CAA87663.1| 358|Caenorhabditis elegans Hypothetical
protein T19H5.2 protein.
Length = 358
Score = 34.7 bits (76), Expect = 0.040
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 262 ELDVDKSGFRNFTSLRSKH--PDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDF 435
E + K F N +SKH +V ++++GG K S M+ FI S++ F
Sbjct: 113 ESAISKQKFLNLNR-KSKHINNNVNRILSIGG-TNYSEKLSIMLQDLKKTRRFIMSIIRF 170
Query: 436 LKKYDFDGLDLDW 474
LK + DG++L W
Sbjct: 171 LKDNELDGVELLW 183
>AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical
protein Y22D7AL.14 protein.
Length = 264
Score = 32.7 bits (71), Expect = 0.16
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 409 SFIRSVVDFLKKYDFDGLDLDWEYP 483
+F +V L+KY +G+D+DWE+P
Sbjct: 3 NFSSTVTQVLQKYRLNGVDIDWEFP 27
>Z81099-2|CAB03188.2| 297|Caenorhabditis elegans Hypothetical
protein K08F9.3 protein.
Length = 297
Score = 30.7 bits (66), Expect = 0.65
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 301 SLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSF-IRSVVDFLKKYDFDGLDLDWE 477
S + H + +F+ E S M+A + S I + F++KY DG++L W
Sbjct: 146 SFENSHKEQEFLECRKKLGESNSTAKIMIAMGFNKGSCKIDCITSFIEKYQVDGVELHWN 205
Query: 478 Y 480
+
Sbjct: 206 H 206
>AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical
protein F28H6.3 protein.
Length = 437
Score = 30.3 bits (65), Expect = 0.86
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 142 YRPGVGRYGIEDIPVDLCTH--LIYSFIGVTEKSSEVLIIDPELD 270
Y GV +DI + + + L YSF+G K EV+II+P D
Sbjct: 87 YFYGVNVNATDDILITVGAYNALYYSFLGWISKGDEVIIIEPAFD 131
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
protein C25A8.4 protein.
Length = 1067
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 289 RNFTSLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSF-IRSVVDFLKKYDFDGLD 465
+N TSLRSK VK + + KY + + M+F I +V++ ++KY F G+
Sbjct: 796 KNLTSLRSKM--VKCGMVLSLSCGDSEKYLNSIL--GDNMTFAIGNVMNIMEKYKFSGVQ 851
Query: 466 LDWE 477
LD E
Sbjct: 852 LDCE 855
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 202 LIYSFIGVTEKSSEVLIIDPELD 270
L Y+F+G K EVLII+P D
Sbjct: 109 LYYAFLGWVNKGDEVLIIEPAYD 131
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 202 LIYSFIGVTEKSSEVLIIDPELD 270
L Y+F+G K EVLII+P D
Sbjct: 126 LYYAFLGWVNKGDEVLIIEPAYD 148
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.7 bits (61), Expect = 2.6
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 293 TSHPSAPNTPMSSSWSRLAVGLKAAPSTHT-WWPRRALGCPSSEALSTS*RNMTSTVWIS 469
TS+P+ P + +++S S A+PST T P PSS ST +TST +
Sbjct: 502 TSNPTTPKSTVTASPSTTGATSTASPSTITSSAPTSQSHSPSSTMTSTV--PVTSTFAST 559
Query: 470 TGSIPV 487
T ++P+
Sbjct: 560 TTTVPI 565
>U41553-2|AAA83292.1| 476|Caenorhabditis elegans Hypothetical
protein ZK1193.3 protein.
Length = 476
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 6 LHGRTVTVENASDICDVGCPG-ELRRISSVCGQQS 107
L+G T T +NA ICDVG G IS C QQS
Sbjct: 41 LNGGTTTPDNAGCICDVGYSGAHCEHIS--CLQQS 73
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +2
Query: 290 VTSHPSAPNTPMSSSWSRLAVGLKAAPSTHTWWPRRALGCPSSEALSTS*RNMTSTVWIS 469
+T+ +AP P SS+ + A +P+T P P++ +TS T+T +
Sbjct: 646 LTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT---TTSTTTTTTTTTTT 702
Query: 470 TGSIPVPPTGVAPSPI 517
T + P P PS I
Sbjct: 703 TQTTPTTPVVTTPSTI 718
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +2
Query: 290 VTSHPSAPNTPMSSSWSRLAVGLKAAPSTHTWWPRRALGCPSSEALSTS*RNMTSTVWIS 469
+T+ +AP P SS+ + A +P+T P P++ +TS T+T +
Sbjct: 702 LTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT---TTSTTTTTTTTTTT 758
Query: 470 TGSIPVPPTGVAPSPI 517
T + P P PS I
Sbjct: 759 TQTTPTTPVVTTPSTI 774
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +2
Query: 290 VTSHPSAPNTPMSSSWSRLAVGLKAAPSTHTWWPRRALGCPSSEALSTS*RNMTSTVWIS 469
+T+ +AP P SS+ + A +P+T P P++ +TS T+T +
Sbjct: 525 LTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT---TTSTTTTTTTTTTT 581
Query: 470 TGSIPVPPTGVAPSPI 517
T + P P PS I
Sbjct: 582 TQTTPTTPVVTTPSTI 597
>AF101312-3|AAC69219.1| 83|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 27 protein.
Length = 83
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -2
Query: 196 YTNPRGCLRCHNVRRRVGTPPNY*SNKRCALC 101
+ P+ +RCH ++R V P +Y + +C+ C
Sbjct: 9 HPEPQREIRCHKLKRLVQHPNSYFMDVKCSGC 40
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,750,537
Number of Sequences: 27780
Number of extensions: 275415
Number of successful extensions: 790
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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