Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5234
         (314 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-P...    26   8.8  
AE014297-3215|AAN13918.1|  237|Drosophila melanogaster CG31239-P...    26   8.8  

>AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-PB
            protein.
          Length = 4547

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 265  LIAHVTRNALSQVTPGCCAGSPPQSLVLIA 176
            L  HV   +L  +TP  CAGS  Q L L++
Sbjct: 1587 LSIHVHHASLQPMTPNPCAGSRCQHLCLLS 1616


>AE014297-3215|AAN13918.1|  237|Drosophila melanogaster CG31239-PA
           protein.
          Length = 237

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 44  LSETIRENTFYITYNTMHYSIINKLTRHKTN 136
           L  TI  NT + TY+++H+   N +  H  N
Sbjct: 119 LVSTIFSNTLHTTYHSLHFLNSNVVQDHAAN 149


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,692,612
Number of Sequences: 53049
Number of extensions: 207425
Number of successful extensions: 680
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)