Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5228
(796 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17519-2|CAB43537.1| 363|Homo sapiens Leu-8 antigen short form ... 38 0.032
X17519-1|CAB43536.1| 385|Homo sapiens protein ( Human mRNA for ... 38 0.032
X16150-1|CAA34275.1| 372|Homo sapiens protein ( Human Lyam-1 mR... 38 0.032
X16070-1|CAA34203.1| 372|Homo sapiens pln homing receptor protein. 38 0.032
M32414-1|AAB60700.1| 372|Homo sapiens protein ( Human leukocyte... 38 0.032
M25280-1|AAC63053.1| 372|Homo sapiens LNHR protein. 38 0.032
BC020758-1|AAH20758.1| 375|Homo sapiens SELL protein protein. 38 0.032
AY233976-1|AAO48272.1| 372|Homo sapiens selectin L (lymphocyte ... 38 0.032
AL021940-1|CAI19356.1| 385|Homo sapiens selectin L (lymphocyte ... 38 0.032
AJ246000-1|CAB55488.1| 385|Homo sapiens L-selectin protein. 38 0.032
M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein. 33 1.2
J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein. 33 1.2
DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein. 33 1.2
BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C typ... 33 1.2
AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C typ... 33 1.2
AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C typ... 33 1.2
AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C typ... 33 1.2
BC150212-1|AAI50213.1| 1479|Homo sapiens mannose receptor, C typ... 32 2.1
BC146647-1|AAI46648.1| 1479|Homo sapiens mannose receptor, C typ... 32 2.1
AF134838-1|AAD30280.1| 1479|Homo sapiens endocytic receptor Endo... 32 2.1
AF107292-1|AAF14192.1| 1479|Homo sapiens urokinase receptor-asso... 32 2.1
AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein. 32 2.1
AC005254-1|AAC25581.1| 315|Homo sapiens PGCN_HUMAN, PARTIAL CDS... 32 2.1
AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein p... 32 2.1
AB014609-1|BAA31684.2| 1484|Homo sapiens KIAA0709 protein protein. 32 2.1
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 31 3.6
AF168801-1|AAD53702.1| 91|Homo sapiens immunoglobulin kappa li... 31 6.3
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 30 8.4
J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human cartilage... 30 8.4
>X17519-2|CAB43537.1| 363|Homo sapiens Leu-8 antigen short form
protein.
Length = 363
Score = 38.3 bits (85), Expect = 0.032
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +1
Query: 229 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 408
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 62 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 105
Query: 409 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 585
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 106 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 150
Query: 586 DGVHWHDVACHHRKPFVC 639
D W+D ACH K +C
Sbjct: 151 DAGKWNDDACHKLKAALC 168
>X17519-1|CAB43536.1| 385|Homo sapiens protein ( Human mRNA for
Leu-8 pan leukocyte antigen. ).
Length = 385
Score = 38.3 bits (85), Expect = 0.032
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +1
Query: 229 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 408
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 62 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 105
Query: 409 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 585
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 106 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 150
Query: 586 DGVHWHDVACHHRKPFVC 639
D W+D ACH K +C
Sbjct: 151 DAGKWNDDACHKLKAALC 168
>X16150-1|CAA34275.1| 372|Homo sapiens protein ( Human Lyam-1 mRNA
for leukocyte adhesion molecule-1. ).
Length = 372
Score = 38.3 bits (85), Expect = 0.032
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +1
Query: 229 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 408
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 49 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 92
Query: 409 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 585
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 93 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 137
Query: 586 DGVHWHDVACHHRKPFVC 639
D W+D ACH K +C
Sbjct: 138 DAGKWNDDACHKLKAALC 155
>X16070-1|CAA34203.1| 372|Homo sapiens pln homing receptor protein.
Length = 372
Score = 38.3 bits (85), Expect = 0.032
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +1
Query: 229 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 408
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 49 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 92
Query: 409 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 585
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 93 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 137
Query: 586 DGVHWHDVACHHRKPFVC 639
D W+D ACH K +C
Sbjct: 138 DAGKWNDDACHKLKAALC 155
>M32414-1|AAB60700.1| 372|Homo sapiens protein ( Human leukocyte
adhesion molecule-1 (LAM-1), exon 9. ).
Length = 372
Score = 38.3 bits (85), Expect = 0.032
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +1
Query: 229 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 408
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 49 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 92
Query: 409 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 585
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 93 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 137
Query: 586 DGVHWHDVACHHRKPFVC 639
D W+D ACH K +C
Sbjct: 138 DAGKWNDDACHKLKAALC 155
>M25280-1|AAC63053.1| 372|Homo sapiens LNHR protein.
Length = 372
Score = 38.3 bits (85), Expect = 0.032
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +1
Query: 229 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 408
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 49 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 92
Query: 409 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 585
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 93 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 137
Query: 586 DGVHWHDVACHHRKPFVC 639
D W+D ACH K +C
Sbjct: 138 DAGKWNDDACHKLKAALC 155
>BC020758-1|AAH20758.1| 375|Homo sapiens SELL protein protein.
Length = 375
Score = 38.3 bits (85), Expect = 0.032
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +1
Query: 229 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 408
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 62 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 105
Query: 409 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 585
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 106 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 150
Query: 586 DGVHWHDVACHHRKPFVC 639
D W+D ACH K +C
Sbjct: 151 DAGKWNDDACHKLKAALC 168
>AY233976-1|AAO48272.1| 372|Homo sapiens selectin L (lymphocyte
adhesion molecule 1) protein.
Length = 372
Score = 38.3 bits (85), Expect = 0.032
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +1
Query: 229 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 408
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 49 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 92
Query: 409 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 585
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 93 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 137
Query: 586 DGVHWHDVACHHRKPFVC 639
D W+D ACH K +C
Sbjct: 138 DAGKWNDDACHKLKAALC 155
>AL021940-1|CAI19356.1| 385|Homo sapiens selectin L (lymphocyte
adhesion molecule 1) protein.
Length = 385
Score = 38.3 bits (85), Expect = 0.032
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +1
Query: 229 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 408
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 62 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 105
Query: 409 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 585
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 106 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 150
Query: 586 DGVHWHDVACHHRKPFVC 639
D W+D ACH K +C
Sbjct: 151 DAGKWNDDACHKLKAALC 168
>AJ246000-1|CAB55488.1| 385|Homo sapiens L-selectin protein.
Length = 385
Score = 38.3 bits (85), Expect = 0.032
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +1
Query: 229 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 408
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 62 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 105
Query: 409 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 585
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 106 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 150
Query: 586 DGVHWHDVACHHRKPFVC 639
D W+D ACH K +C
Sbjct: 151 DAGKWNDDACHKLKAALC 168
>M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +1
Query: 481 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCE 642
W++G G+ GK P R CV I+ N+ W D C ++ ++C+
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein.
Length = 1456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +1
Query: 481 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCE 642
W++G G+ GK P R CV I+ N+ W D C ++ ++C+
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +1
Query: 481 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCE 642
W++G G+ GK P R CV I+ N+ W D C ++ ++C+
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +1
Query: 481 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCE 642
W++G G+ GK P R CV I+ N+ W D C ++ ++C+
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C type 1
protein.
Length = 1456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +1
Query: 481 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCE 642
W++G G+ GK P R CV I+ N+ W D C ++ ++C+
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +1
Query: 481 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCE 642
W++G G+ GK P R CV I+ N+ W D C ++ ++C+
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +1
Query: 481 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCE 642
W++G G+ GK P R CV I+ N+ W D C ++ ++C+
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>BC150212-1|AAI50213.1| 1479|Homo sapiens mannose receptor, C type 2
protein.
Length = 1479
Score = 32.3 bits (70), Expect = 2.1
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Frame = +1
Query: 100 PNGRILEPP----VPSLCV------QRNIHERYADNKGYFFSWRDPALRGVEEDWLS--- 240
P GR + P +PS+C Q E + KG+ +W P+ + ED ++
Sbjct: 487 PEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGW--TWHSPSCYWLGEDQVTYSE 544
Query: 241 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPNEING 420
AR C LV++ E +V + I + +Y WT+ + DL N
Sbjct: 545 ARRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQ----------DL--NSTGS 592
Query: 421 WFWTAELQKLAPTTNRQQNDWSEGG 495
+FW + + + NR Q +S GG
Sbjct: 593 FFWLSGDEVMYTHWNRDQPGYSRGG 617
>BC146647-1|AAI46648.1| 1479|Homo sapiens mannose receptor, C type 2
protein.
Length = 1479
Score = 32.3 bits (70), Expect = 2.1
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Frame = +1
Query: 100 PNGRILEPP----VPSLCV------QRNIHERYADNKGYFFSWRDPALRGVEEDWLS--- 240
P GR + P +PS+C Q E + KG+ +W P+ + ED ++
Sbjct: 487 PEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGW--TWHSPSCYWLGEDQVTYSE 544
Query: 241 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPNEING 420
AR C LV++ E +V + I + +Y WT+ + DL N
Sbjct: 545 ARRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQ----------DL--NSTGS 592
Query: 421 WFWTAELQKLAPTTNRQQNDWSEGG 495
+FW + + + NR Q +S GG
Sbjct: 593 FFWLSGDEVMYTHWNRDQPGYSRGG 617
>AF134838-1|AAD30280.1| 1479|Homo sapiens endocytic receptor Endo180
protein.
Length = 1479
Score = 32.3 bits (70), Expect = 2.1
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Frame = +1
Query: 100 PNGRILEPP----VPSLCV------QRNIHERYADNKGYFFSWRDPALRGVEEDWLS--- 240
P GR + P +PS+C Q E + KG+ +W P+ + ED ++
Sbjct: 487 PEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGW--TWHSPSCYWLGEDQVTYSE 544
Query: 241 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPNEING 420
AR C LV++ E +V + I + +Y WT+ + DL N
Sbjct: 545 ARRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQ----------DL--NSTGS 592
Query: 421 WFWTAELQKLAPTTNRQQNDWSEGG 495
+FW + + + NR Q +S GG
Sbjct: 593 FFWLSGDEVMYTHWNRDQPGYSRGG 617
>AF107292-1|AAF14192.1| 1479|Homo sapiens urokinase
receptor-associated protein uPARAP protein.
Length = 1479
Score = 32.3 bits (70), Expect = 2.1
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Frame = +1
Query: 100 PNGRILEPP----VPSLCV------QRNIHERYADNKGYFFSWRDPALRGVEEDWLS--- 240
P GR + P +PS+C Q E + KG+ +W P+ + ED ++
Sbjct: 487 PEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGW--TWHSPSCYWLGEDQVTYSE 544
Query: 241 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPNEING 420
AR C LV++ E +V + I + +Y WT+ + DL N
Sbjct: 545 ARRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQ----------DL--NSTGS 592
Query: 421 WFWTAELQKLAPTTNRQQNDWSEGG 495
+FW + + + NR Q +S GG
Sbjct: 593 FFWLSGDEVMYTHWNRDQPGYSRGG 617
>AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein.
Length = 1321
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 511 QPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCEENDAL 657
QPDN GG E CV ++ + + W+DV C++ P+VC++ L
Sbjct: 1173 QPDN--FFAGG--EDCVVMVAH---ESGRWNDVPCNYNLPYVCKKGTVL 1214
>AC005254-1|AAC25581.1| 315|Homo sapiens PGCN_HUMAN, PARTIAL CDS
protein.
Length = 315
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 511 QPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCEENDAL 657
QPDN GG E CV ++ + + W+DV C++ P+VC++ L
Sbjct: 167 QPDN--FFAGG--EDCVVMVAH---ESGRWNDVPCNYNLPYVCKKGTVL 208
>AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein
protein.
Length = 1335
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 511 QPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCEENDAL 657
QPDN GG E CV ++ + + W+DV C++ P+VC++ L
Sbjct: 1187 QPDN--FFAGG--EDCVVMVAH---ESGRWNDVPCNYNLPYVCKKGTVL 1228
>AB014609-1|BAA31684.2| 1484|Homo sapiens KIAA0709 protein protein.
Length = 1484
Score = 32.3 bits (70), Expect = 2.1
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Frame = +1
Query: 100 PNGRILEPP----VPSLCV------QRNIHERYADNKGYFFSWRDPALRGVEEDWLS--- 240
P GR + P +PS+C Q E + KG+ +W P+ + ED ++
Sbjct: 492 PEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGW--TWHSPSCYWLGEDQVTYSE 549
Query: 241 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPNEING 420
AR C LV++ E +V + I + +Y WT+ + DL N
Sbjct: 550 ARRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQ----------DL--NSTGS 597
Query: 421 WFWTAELQKLAPTTNRQQNDWSEGG 495
+FW + + + NR Q +S GG
Sbjct: 598 FFWLSGDEVMYTHWNRDQPGYSRGG 622
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 511 QPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCEENDA 654
QPDN A E CV ++ +++ W+DV C++ PF C++ A
Sbjct: 2252 QPDNFF----AAGEDCVVMI---WHEKGEWNDVPCNYHLPFTCKKGTA 2292
>AF168801-1|AAD53702.1| 91|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 91
Score = 30.7 bits (66), Expect = 6.3
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = -3
Query: 671 LTYLRRASFSSQTNGLRWWQATSCQWTPSL*KLFKIATQCSEAPPCISSRLSGCGFPMPP 492
+T+ RAS + TN L W+Q S Q P L ++ +T+ + PP S SG F +
Sbjct: 9 VTFSCRASQTLATNFLAWYQQKSDQ-APRL-LIYDSSTRSTGIPPRFSGTGSGTDFTLTI 66
Query: 491 PSDQS 477
S QS
Sbjct: 67 SSLQS 71
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 30.3 bits (65), Expect = 8.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 511 QPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCEE 645
QPDN A E CV ++ +++ W+DV C++ PF C++
Sbjct: 475 QPDNFF----AAGEDCVVMI---WHEKGEWNDVPCNYHLPFTCKK 512
>J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human
cartilage-specific proteoglycan core protein (CSPCP)
mRNA, 3' end. ).
Length = 480
Score = 30.3 bits (65), Expect = 8.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 511 QPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCEE 645
QPDN A E CV ++ +++ W+DV C++ PF C++
Sbjct: 355 QPDNFF----AAGEDCVVMI---WHEKGEWNDVPCNYHLPFTCKK 392
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,949,748
Number of Sequences: 237096
Number of extensions: 2817062
Number of successful extensions: 6478
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6477
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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