Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5228
(796 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 32 0.54
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 32 0.54
Z82053-9|CAJ85768.1| 189|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z82053-8|CAB61018.2| 309|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z81542-1|CAB04414.1| 379|Caenorhabditis elegans Hypothetical pr... 31 0.72
U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin ... 31 0.72
AF070968-1|AAD15926.1| 309|Caenorhabditis elegans PAR-6 protein. 31 0.72
Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81492-6|CAB04034.1| 416|Caenorhabditis elegans Hypothetical pr... 31 1.3
U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical ... 30 2.2
AF024502-1|AAK77624.1| 416|Caenorhabditis elegans Hypothetical ... 30 2.2
Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical p... 29 2.9
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 29 2.9
U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical ... 29 2.9
Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z84574-1|CAE54890.1| 577|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z82052-3|CAB04826.1| 363|Caenorhabditis elegans Hypothetical pr... 29 5.1
AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical ... 29 5.1
AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical ... 29 5.1
Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical pr... 28 8.9
U21324-19|AAK68224.1| 407|Caenorhabditis elegans C-type lectin ... 28 8.9
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +1
Query: 496 GIGKPQPDNRELI---QGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCEENDALLK- 663
G P++ E + + A+E+C ++N+FY + H + F+C + +K
Sbjct: 582 GTADDVPESHEALAQQKTAANEYCFTVINDFYQSHKTAQRILYDHTRCFLCATKNCSVKI 641
Query: 664 -YVRYTNPNLRV*LSMTSLYT 723
++ Y + + LS++S T
Sbjct: 642 VFIEYEKYIIAIGLSLSSAAT 662
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = -1
Query: 121 APGCVHW--GTVRGPPPLA--QLIRVLMSSFSRCVQDRASLVP 5
APG ++ G ++GPPPL+ QL +L+ +F+R + D A + P
Sbjct: 367 APGSLYGLEGMLQGPPPLSQDQLNSILLGAFTRHLSDPAMIPP 409
>Z82053-9|CAJ85768.1| 189|Caenorhabditis elegans Hypothetical
protein T26E3.3b protein.
Length = 189
Score = 31.5 bits (68), Expect = 0.72
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 170 LTIKDTSSRGGTQRSAASKKTG*AQETTADNAAWT*YLSRPAMKMNGS 313
+T+K + R R + + T A E +A AA T + RP MKMNGS
Sbjct: 123 ITVKPANQRNTLSRGPSQQGTPNASEMSAATAAATGGIQRP-MKMNGS 169
>Z82053-8|CAB61018.2| 309|Caenorhabditis elegans Hypothetical
protein T26E3.3a protein.
Length = 309
Score = 31.5 bits (68), Expect = 0.72
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 170 LTIKDTSSRGGTQRSAASKKTG*AQETTADNAAWT*YLSRPAMKMNGS 313
+T+K + R R + + T A E +A AA T + RP MKMNGS
Sbjct: 243 ITVKPANQRNTLSRGPSQQGTPNASEMSAATAAATGGIQRP-MKMNGS 289
>Z81542-1|CAB04414.1| 379|Caenorhabditis elegans Hypothetical
protein F49A5.2 protein.
Length = 379
Score = 31.5 bits (68), Expect = 0.72
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +1
Query: 241 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYI 348
A+ +C+ +C +LVS+ +++EN +V++ I D YI
Sbjct: 267 AQTFCKTKCANLVSINSANENRYVQS-IYNDTNGYI 301
>U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin
protein 5 protein.
Length = 419
Score = 31.5 bits (68), Expect = 0.72
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 103 NGRILEPPVPSLCVQRNIHERYADNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVS 282
NG P +C + +ADN Y ++ L ++ A+ C Q C +L S
Sbjct: 137 NGNCESDPRAFVC---ELPATHADNCTYNYNGHCFTLHTERNTFVQAQAICEQECGNLAS 193
Query: 283 LETSDENEWVKA 318
+ +S+EN ++ +
Sbjct: 194 IHSSNENRYLSS 205
>AF070968-1|AAD15926.1| 309|Caenorhabditis elegans PAR-6 protein.
Length = 309
Score = 31.5 bits (68), Expect = 0.72
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 170 LTIKDTSSRGGTQRSAASKKTG*AQETTADNAAWT*YLSRPAMKMNGS 313
+T+K + R R + + T A E +A AA T + RP MKMNGS
Sbjct: 243 ITVKPANQRNTLSRGPSQQGTPNASEMSAATAAATGGIQRP-MKMNGS 289
>Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical
protein F16H6.1 protein.
Length = 555
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 241 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYI 348
A++ C+Q C +LVS+ + +EN +V++ + YI
Sbjct: 189 AQSACQQECGNLVSIHSDEENNFVQSLFTTNSPTYI 224
>Z81492-6|CAB04034.1| 416|Caenorhabditis elegans Hypothetical
protein E03H4.10 protein.
Length = 416
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +1
Query: 166 YADNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARIVQD 333
+AD+ Y ++ E ++ A+ C + DLVS+ +S+EN +++ QD
Sbjct: 157 HADDCTYNYNGYCYTFSSTAEPFIIAQTKCAETYGDLVSIHSSNENRYIETFAAQD 212
>U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical
protein F10G2.3 protein.
Length = 417
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 223 EEDWLSARNYCRQRCMDLVSLETSDENEWV 312
E ++ A+N C Q C DL ++ T++EN ++
Sbjct: 175 EASFVVAQNTCEQFCGDLATIHTANENRYI 204
>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical protein
ZK512.5 protein.
Length = 1232
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 91 AQFPNGRILEPPVPSLCVQRNIHERYADNKGYFFSWRDPALRGV 222
A PN + PPVP + ++ER A +KG+F S ++ ++ +
Sbjct: 1053 ASIPNAKTTAPPVPQKQPELALNERKA-SKGWFGSIKEKVIKSI 1095
>AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical
protein M151.3 protein.
Length = 836
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Frame = -1
Query: 121 APGCVHW--GTVRGPPPLA--QLIRVLMSSFSRCVQDRASL 11
APG ++ G ++GPPPL+ QL +L+ +F+R + D A +
Sbjct: 511 APGSLYGPEGLLQGPPPLSQDQLNSILLGAFTRHLSDPAMI 551
>AF024502-1|AAK77624.1| 416|Caenorhabditis elegans Hypothetical
protein M151.7 protein.
Length = 416
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Frame = -1
Query: 121 APGCVHW--GTVRGPPPLA--QLIRVLMSSFSRCVQDRASL 11
APG ++ G ++GPPPL+ QL +L+ +F+R + D A +
Sbjct: 52 APGSLYGPEGLLQGPPPLSQDQLNSILLGAFTRHLSDPAMI 92
>Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical
protein T20B3.16 protein.
Length = 360
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 241 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCD 372
A+ +C+ +C ++VS+ +++EN +V++ I K YI + D
Sbjct: 258 AQKFCKTKCANVVSINSANENRYVQS-IYYIKDGYITLGAAVLD 300
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 29.5 bits (63), Expect = 2.9
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +1
Query: 214 RGVEEDWLSARNYCRQRCMDLVSLETSDENEWV 312
R +++WL+AR +C DL ++ ++ +W+
Sbjct: 62 RAGDQNWLTAREHCLSLNADLAAIRNVEQLDWI 94
>U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical
protein K02F3.5 protein.
Length = 308
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 502 GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCEE 645
GK QPDN+E +E+CV + + W D C +PFVC++
Sbjct: 269 GKKQPDNQE-----HNENCVEV-----DHSGQWTDKLCIITRPFVCKK 306
>AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5B.2 protein.
Length = 355
Score = 29.5 bits (63), Expect = 2.9
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +1
Query: 241 ARNYCRQRCMDLVSLETSDENEWVKA 318
A+ C+ RC +LVS+ +++EN ++++
Sbjct: 253 AQEICKTRCANLVSISSANENRFIRS 278
>Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 454 PTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYNDGV 594
P +R+Q + G G P P N G AS+ LN+FY DG+
Sbjct: 51 PIQHREQANAEFGQKEGSPDPKNMVAATGNASK---PSLNSFYADGL 94
>Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 454 PTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYNDGV 594
P +R+Q + G G P P N G AS+ LN+FY DG+
Sbjct: 51 PIQHREQANAEFGQKEGSPDPKNMVAATGNASK---PSLNSFYADGL 94
>Z84574-1|CAE54890.1| 577|Caenorhabditis elegans Hypothetical
protein F33E2.2c protein.
Length = 577
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 454 PTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYNDGV 594
P +R+Q + G G P P N G AS+ LN+FY DG+
Sbjct: 51 PIQHREQANAEFGQKEGSPDPKNMVAATGNASK---PSLNSFYADGL 94
>Z82052-3|CAB04826.1| 363|Caenorhabditis elegans Hypothetical
protein T25E12.8 protein.
Length = 363
Score = 28.7 bits (61), Expect = 5.1
Identities = 8/27 (29%), Positives = 20/27 (74%)
Frame = +1
Query: 235 LSARNYCRQRCMDLVSLETSDENEWVK 315
+ A+ +C +C +LVS+ +++EN +++
Sbjct: 261 VEAQRFCNTKCANLVSIHSANENRFIQ 287
>AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 454 PTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYNDGV 594
P +R+Q + G G P P N G AS+ LN+FY DG+
Sbjct: 51 PIQHREQANAEFGQKEGSPDPKNMVAATGNASK---PSLNSFYADGL 94
>AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 454 PTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYNDGV 594
P +R+Q + G G P P N G AS+ LN+FY DG+
Sbjct: 51 PIQHREQANAEFGQKEGSPDPKNMVAATGNASK---PSLNSFYADGL 94
>Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical
protein B0365.6 protein.
Length = 545
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 253 CRQRCMDLVSLETSDENEWVKARIVQDKIKYI 348
C+Q C +LVS+ + +EN +V++ + YI
Sbjct: 186 CQQACGNLVSIHSIEENNYVQSLFTTNAPTYI 217
>U21324-19|AAK68224.1| 407|Caenorhabditis elegans C-type lectin
protein 6 protein.
Length = 407
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 181 GYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARI--VQDKIKYIWT 354
G+ +S+ PA + A+ C Q C +L S+ +S+EN ++ + I + +K YI
Sbjct: 165 GHCYSFHQPAT------FAQAQVICEQECGNLASIHSSNENRYLSSIISSLSNKNYYIGA 218
Query: 355 S 357
S
Sbjct: 219 S 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,648,266
Number of Sequences: 27780
Number of extensions: 415425
Number of successful extensions: 1130
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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