Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5225
         (749 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic d...    29   6.8  
AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA...    29   6.8  
AY089481-1|AAL90219.1|  476|Drosophila melanogaster AT29994p pro...    29   8.9  
AF541951-1|AAN34654.1|  102|Drosophila melanogaster putative tra...    29   8.9  
AF199485-1|AAF13273.1|  476|Drosophila melanogaster sugar transp...    29   8.9  
AE013599-584|AAF59139.1|  476|Drosophila melanogaster CG17976-PA...    29   8.9  

>L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic
           discs protein protein.
          Length = 2895

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -2

Query: 271 SSNFLNCTLPLVDSENHNRISEQINY*AVKIQTP*CQ*RHLESSKILK-YL*SCPQLVKT 95
           S+NF+ C++    +     + EQ+ Y   K++   C      S  I K Y+ S   +VKT
Sbjct: 415 SANFIRCSVVTETNRVATWMDEQLGYIGAKLEHSCCAFNEFISDSITKIYVCSLYTVVKT 474

Query: 94  SAN 86
            +N
Sbjct: 475 ESN 477


>AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA
           protein.
          Length = 2885

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -2

Query: 271 SSNFLNCTLPLVDSENHNRISEQINY*AVKIQTP*CQ*RHLESSKILK-YL*SCPQLVKT 95
           S+NF+ C++    +     + EQ+ Y   K++   C      S  I K Y+ S   +VKT
Sbjct: 418 SANFIRCSVVTETNRVATWMDEQLGYIGAKLEHSCCAFNEFISDSITKIYVCSLYTVVKT 477

Query: 94  SAN 86
            +N
Sbjct: 478 ESN 480


>AY089481-1|AAL90219.1|  476|Drosophila melanogaster AT29994p
           protein.
          Length = 476

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 15  LPTFIMLSSHFVGHRTSLS*L*FVFAEVFTS*G 113
           LP FI+ S HFV   + +S + F   E+FT  G
Sbjct: 268 LPLFIVCSFHFVQQMSGISAIWFYSIEIFTQSG 300


>AF541951-1|AAN34654.1|  102|Drosophila melanogaster putative
           transposase protein.
          Length = 102

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +1

Query: 70  VDSDSYLLRFS-RVEDMIKGILKFSTILNAFTDIMAFEFLRLSN*SVRKFYYDFPSQLKV 246
           VD +SY  R S  +E   K I  +  +L  +TD + F+F R    S  K +  FP +LKV
Sbjct: 4   VDINSYEKRLSFALEYKEKPIEFWFDVL--WTDEIGFQFQR----SFSKKFMHFPKKLKV 57

Query: 247 ECSLKN 264
           EC   N
Sbjct: 58  ECRPAN 63


>AF199485-1|AAF13273.1|  476|Drosophila melanogaster sugar
           transporter 3 protein.
          Length = 476

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 15  LPTFIMLSSHFVGHRTSLS*L*FVFAEVFTS*G 113
           LP FI+ S HFV   + +S + F   E+FT  G
Sbjct: 268 LPLFIVCSFHFVQQMSGISAIWFYSIEIFTQSG 300


>AE013599-584|AAF59139.1|  476|Drosophila melanogaster CG17976-PA
           protein.
          Length = 476

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 15  LPTFIMLSSHFVGHRTSLS*L*FVFAEVFTS*G 113
           LP FI+ S HFV   + +S + F   E+FT  G
Sbjct: 268 LPLFIVCSFHFVQQMSGISAIWFYSIEIFTQSG 300


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,280,784
Number of Sequences: 53049
Number of extensions: 561605
Number of successful extensions: 956
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)