Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5219
(664 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC29A10.16c |||cytochrome b5 |Schizosaccharomyces pombe|chr 2|... 71 1e-13
SPCC16A11.10c |oca8||cytochrome b5 |Schizosaccharomyces pombe|ch... 69 8e-13
SPAC1F12.10c |||NADPH-hemoprotein reductase |Schizosaccharomyces... 36 0.005
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 34 0.016
SPCC330.03c |||NADPH-hemoprotein reductase|Schizosaccharomyces p... 28 1.0
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 28 1.0
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 28 1.4
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 26 4.2
SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces p... 25 7.4
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 25 7.4
SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2 |Schizosacch... 25 9.7
SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|... 25 9.7
>SPBC29A10.16c |||cytochrome b5 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 70.9 bits (166), Expect = 1e-13
Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Frame = +2
Query: 41 EVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAIEW 220
E+ +N+K ++I+ VYDV+ F +DHPGG ++++D AG DA++ + ++GHS A E
Sbjct: 10 EIVEHNNSKDMYMVINGKVYDVSNFADDHPGGLDIMLDYAGQDATKAYQDIGHSIAADEL 69
Query: 221 RNTFKVGEIV--DEEKLEVKCKQPSAAESAEPLTLGGLLAVYGPPVAMAVLAYL 376
+G++ EE+L+ K S PL L L+A+ P A+AV+ ++
Sbjct: 70 LEEMYIGDLKPGTEERLKELKKPRSFDNDTPPLPL--LIALIVLP-AIAVIVFV 120
>SPCC16A11.10c |oca8||cytochrome b5 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 129
Score = 68.5 bits (160), Expect = 8e-13
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +2
Query: 29 TQVAEVAARDNNKQNL-IIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSE 205
T E + N + +L I++ + VYD++ FL+ HPGG EVLVD AG DAS F +VGHSE
Sbjct: 5 TITVEEVLKHNTRDDLYIVVKDKVYDISKFLDAHPGGEEVLVDLAGRDASGPFEDVGHSE 64
Query: 206 IAIEWRNTFKVGEIVDEE 259
A E F +G ++ E
Sbjct: 65 DAQELLEKFYIGNLLRTE 82
>SPAC1F12.10c |||NADPH-hemoprotein reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 147
Score = 35.9 bits (79), Expect = 0.005
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 41 EVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECF 184
E+A + I I VY+V+A+L HP G + ++D AG DA+ F
Sbjct: 78 ELAKHKTKEDCWIAIRGKVYNVSAYLPYHPAGQKRILDYAGRDATVIF 125
>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 479
Score = 34.3 bits (75), Expect = 0.016
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 74 LIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFH--EVGHSEIAIEWRNTFKVGEI 247
L++I+ VV+D+ F +HPGG +L G DA+ F+ H+ A +T++V +
Sbjct: 375 LVLINGVVHDMTGF--EHPGGQGLLRSAFGKDATAAFNGGVYDHTNGAHNLLSTYRVAVV 432
Query: 248 VDEEKLEV 271
++EV
Sbjct: 433 RGGMEVEV 440
>SPCC330.03c |||NADPH-hemoprotein reductase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 145
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 26 STQVAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASE 178
S E+A + + I VY+V A+L HP G + ++ ++G DA++
Sbjct: 71 SVTAEELAKHCSPDDCWMAIRGKVYNVTAYLPYHPVGPKKILKHSGVDATK 121
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 28.3 bits (60), Expect = 1.0
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 146 LVDNAGSDASECFHEVGHSEIAIEWRNTFKVGEI--VDEEKLEVKCKQPS 289
L D S SE F VG + + RNT ++ I VDE KLE+ K PS
Sbjct: 1449 LDDVERSIESEDFQSVGDVNVKVN-RNTREISFIYNVDEHKLEMAIKIPS 1497
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -2
Query: 192 TSWKHSEASEPALSTRTSVPPGWS--SRKAATSYTTLS 85
+S + A+EP+ ST T +PP +S S A+ Y+T S
Sbjct: 303 SSKREEAAAEPSSSTATDIPPPYSTPSVAGASDYSTPS 340
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 246 ISPTLNVLRHSMAISLWPTSWKHSEASEPALSTRTSVPPGWSSRKAATSYTTLSM 82
+ T + R +S P + HS SE +STRTS P S + T+++ ++
Sbjct: 52 VDSTESTKRSENFVSHIPLTPSHSGQSEKLMSTRTSHSPYISPTMSYTNHSPANL 106
>SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 723
Score = 25.4 bits (53), Expect = 7.4
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = +2
Query: 119 EDHPGGTEVLVDNAGSDASECFHEVGHSEIAIEWRNTFKVGEIVDEEKLEVKCKQPSAAE 298
ED G+EV VD + EC E E+ +EW K I + K+ K +P E
Sbjct: 48 EDQEDGSEVYVDREFVEQFECPVE---GEL-VEWA-VKKEESIENFSKIVAKLHEPCTHE 102
Query: 299 SAEPLTLGGLLAVYG 343
+ GGL A+ G
Sbjct: 103 ----VNYGGLCAICG 113
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 182 FHEVGHSEIAIEWRNTFKVGEIVDEEKLEVK 274
F E +E+ +W+ V E+ D EKLE+K
Sbjct: 79 FTEKEINELVDDWKPEPLVAELTDVEKLELK 109
>SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 683
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = -2
Query: 519 FLDNPFKARLGEVHPYIRRG---CVLKV 445
+L +P + L + HPY+R+ CV+K+
Sbjct: 125 YLADPLRKALKDEHPYVRKAAAVCVVKM 152
>SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +2
Query: 59 NNKQNLIIIDNV---VYDVAAFLEDHPGGTEVLVDNAGSDASECF 184
N + LI+ID V + P G +L+ + G D S CF
Sbjct: 32 NIRGKLIVIDRVELPILPTTVLALLFPNGFHLLLKHEGGDVSSCF 76
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,324,678
Number of Sequences: 5004
Number of extensions: 41449
Number of successful extensions: 130
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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