Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5219
(664 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0743 + 6676906-6677007,6677160-6677226,6678246-6678529 71 1e-12
05_01_0065 + 461182-461271,462222-462288,462408-462664 64 7e-11
02_05_0137 - 26181793-26182055,26182172-26182238,26182392-26182478 64 7e-11
01_07_0340 + 42851330-42851413,42852179-42852245,42852336-42852592 61 9e-10
08_02_0958 - 23044708-23046045,23046131-23046363,23047059-230471... 58 8e-09
08_02_0956 + 23026108-23027146,23027255-23027395,23029334-230295... 58 8e-09
02_05_0889 - 32532495-32533832,32533919-32534151,32534321-325344... 54 1e-07
09_02_0530 + 10285844-10287217 39 0.004
07_01_0887 + 7380332-7380370,7381286-7381640,7382752-7382886,738... 36 0.022
09_02_0511 - 10079180-10079355,10079656-10079722,10080144-100801... 36 0.029
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 28 5.8
08_01_0030 + 222748-222829,223224-223448,223800-224204,224773-22... 28 5.8
06_02_0046 + 10928708-10928798,10929997-10930077,10930567-109306... 28 7.6
03_05_1079 + 30222017-30222903,30222992-30223117,30223752-302238... 28 7.6
>12_01_0743 + 6676906-6677007,6677160-6677226,6678246-6678529
Length = 150
Score = 70.5 bits (165), Expect = 1e-12
Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Frame = +2
Query: 2 ERASCRSTSTQVAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVD-NAGSDASE 178
E AS + + ++V + K ++I VYDV FLEDHPGG +VL+ +A DA+E
Sbjct: 5 EAASAKKLFS-ASDVVGHASRKDCWVVIHGKVYDVTKFLEDHPGGEDVLLHASASGDATE 63
Query: 179 CFHEVGHSEIAIEWRNTFKVGEIVDEEKLEVKCKQPSAAESAEPLTLGGLLAVYGPPVAM 358
F +VGHS AI N + +G I D + + + P + GPP
Sbjct: 64 AFEDVGHSTSAISMMNNYLIGSIKDYVPPSAS-EATTIGGNDVPPNFRRMPQKKGPPAPN 122
Query: 359 AVLAYLLYTFLFG 397
L +LL F+ G
Sbjct: 123 TFLDFLLPLFVLG 135
>05_01_0065 + 461182-461271,462222-462288,462408-462664
Length = 137
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +2
Query: 41 EVAARDNNKQNL-IIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAIE 217
E A+ N+K + +II VY+V+ FLEDHPGG +VL+ + G DA++ F +VGHS A
Sbjct: 12 EEVAKHNSKDDCWLIIGGKVYNVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSTTARA 71
Query: 218 WRNTFKVGEI 247
+ + VG+I
Sbjct: 72 MMDEYYVGDI 81
>02_05_0137 - 26181793-26182055,26182172-26182238,26182392-26182478
Length = 138
Score = 64.5 bits (150), Expect = 7e-11
Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Frame = +2
Query: 41 EVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAIEW 220
EV+ ++ K +II VYDV+ F+E+HPGG EVL+ G DA+ F+++GH+ A E
Sbjct: 12 EVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADFNDIGHTATAKEL 71
Query: 221 RNTFKVGEIVDEEKLEVKCKQPSAAE--SAEP--LTLGGLLAV--YGPPVAMAVLAYLLY 382
+ +GE VD + K +E SA+P + G L PV + LAY L
Sbjct: 72 MPQYCIGE-VDASTVPAKPAYRVVSEDASAKPDAASQGAWLTALQLAVPVVLLGLAYALQ 130
Query: 383 TF 388
F
Sbjct: 131 DF 132
>01_07_0340 + 42851330-42851413,42852179-42852245,42852336-42852592
Length = 135
Score = 60.9 bits (141), Expect = 9e-10
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +2
Query: 41 EVAARDNNKQNL-IIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAIE 217
E ++ N K + +II VY+V FLEDHPGG +VL+ + DA++ F +VGHS A
Sbjct: 10 EEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSTTARA 69
Query: 218 WRNTFKVGEIVDEEKLEVKCK 280
+ + VG+I D + K K
Sbjct: 70 MMDEYYVGDI-DATTIPTKVK 89
>08_02_0958 -
23044708-23046045,23046131-23046363,23047059-23047199,
23047296-23048334
Length = 916
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/72 (36%), Positives = 45/72 (62%)
Frame = +2
Query: 35 VAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAI 214
++EV + I++ VYD AFL+DHPGG + ++ NAG+D +E F + HS+ A
Sbjct: 546 MSEVRKHSSQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAK 604
Query: 215 EWRNTFKVGEIV 250
+T+++GE++
Sbjct: 605 ALLDTYRIGELI 616
>08_02_0956 +
23026108-23027146,23027255-23027395,23029334-23029566,
23029652-23030989
Length = 916
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/72 (36%), Positives = 45/72 (62%)
Frame = +2
Query: 35 VAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAI 214
++EV + I++ VYD AFL+DHPGG + ++ NAG+D +E F + HS+ A
Sbjct: 546 MSEVRKHSSQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAK 604
Query: 215 EWRNTFKVGEIV 250
+T+++GE++
Sbjct: 605 ALLDTYRIGELI 616
>02_05_0889 -
32532495-32533832,32533919-32534151,32534321-32534461,
32534564-32535521
Length = 889
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/77 (33%), Positives = 44/77 (57%)
Frame = +2
Query: 20 STSTQVAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGH 199
+T ++EV + II+ VYD FL+DHPGG + ++ NAG+D +E F + H
Sbjct: 513 TTQYTMSEVRRHTTPESAWIIVHGHVYDCTGFLKDHPGGADSIMINAGTDCTEEFDAI-H 571
Query: 200 SEIAIEWRNTFKVGEIV 250
S+ A +++GE++
Sbjct: 572 SDKARGLLEMYRIGELI 588
>09_02_0530 + 10285844-10287217
Length = 457
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/113 (30%), Positives = 44/113 (38%)
Frame = +2
Query: 41 EVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAIEW 220
E+ A + I I VYDV A++ HPGG L+ AG DA++ F H A
Sbjct: 23 ELRAHASRDDLWISISGDVYDVTAWVPHHPGGDIPLLTLAGQDATDAF-AAYHPPSARPL 81
Query: 221 RNTFKVGEIVDEEKLEVKCKQPSAAESAEPLTLGGLLAVYGPPVAMAVLAYLL 379
F VG + E V L+ GL GP + V LL
Sbjct: 82 LGRFLVGRL---EDYTVSPASADFRRLLAQLSSAGLFERVGPTPKVQVAGMLL 131
>07_01_0887 +
7380332-7380370,7381286-7381640,7382752-7382886,
7383029-7383138
Length = 212
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/53 (30%), Positives = 34/53 (64%)
Frame = +2
Query: 80 IIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAIEWRNTFKV 238
++ VY++A +++ HPGG ++L+ AG D++ F + + + +++TFKV
Sbjct: 159 VLKGRVYNIAPYMKFHPGGVDMLMKAAGKDSTALFSIL----LLLLFKHTFKV 207
>09_02_0511 -
10079180-10079355,10079656-10079722,10080144-10080181,
10080255-10080336
Length = 120
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/25 (56%), Positives = 22/25 (88%)
Frame = +2
Query: 92 VVYDVAAFLEDHPGGTEVLVDNAGS 166
+VYDV +++E+HPGG E+L +NAG+
Sbjct: 40 MVYDVTSYVEEHPGGDEIL-NNAGA 63
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 269 VKCKQPSAAESAEPLTLGGLLAVYGPPVAMAVLAYLLYTFL 391
+KCK A E+A+PL + + PP AM V +L+T L
Sbjct: 8 IKCKAAVAWEAAKPLVIEEV--EVAPPQAMEVRVKILFTSL 46
>08_01_0030 +
222748-222829,223224-223448,223800-224204,224773-225389
Length = 442
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -2
Query: 84 MMIRFCLLLSRAATSATCVLVDRHDAR 4
M I F LL+ AA ATC V RH R
Sbjct: 150 MAISFTSLLAMAAVLATCFFVRRHQIR 176
>06_02_0046 +
10928708-10928798,10929997-10930077,10930567-10930685,
10931275-10931894,10931992-10933184,10933280-10933359,
10933751-10933846,10933931-10934004,10936007-10936151,
10936323-10936487
Length = 887
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -2
Query: 258 SSSTISPTLNVLRHSMAISLWPTSWKHSEASEPALSTRTSVPPGWSSRKAATSYTTLSMM 79
SSS ++P + L + ++ K + S+P +T S SS +A+TS T+ S +
Sbjct: 643 SSSNLAPANSSLHSRESDNIISKEAKLASLSQPVGATSASASIQGSSAQASTSTTSQSKV 702
Query: 78 IR 73
+R
Sbjct: 703 VR 704
>03_05_1079 +
30222017-30222903,30222992-30223117,30223752-30223808,
30224883-30224913,30225159-30225236,30225297-30225383
Length = 421
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 443 PEVVLANSAHCTGRASRTGTCRAGTR 366
PE+ L CTGR +G C G+R
Sbjct: 264 PELGLMQRRRCTGREDGSGRCTTGSR 289
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,088,864
Number of Sequences: 37544
Number of extensions: 299479
Number of successful extensions: 886
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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