Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5219
         (664 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78539-6|CAB01732.2|  134|Caenorhabditis elegans Hypothetical pr...    78   5e-15
AF003141-8|AAK21480.1|  141|Caenorhabditis elegans Hypothetical ...    71   1e-12
Z81052-7|CAJ58492.1|  103|Caenorhabditis elegans Hypothetical pr...    65   4e-11
AL032654-5|CAD91715.2|  516|Caenorhabditis elegans Hypothetical ...    37   0.011
AL032654-4|CAA21721.2|  552|Caenorhabditis elegans Hypothetical ...    37   0.011
Z81038-3|CAB02759.1|  316|Caenorhabditis elegans Hypothetical pr...    37   0.015
Z81128-3|CAB03401.1|  410|Caenorhabditis elegans Hypothetical pr...    34   0.10 
Z66495-11|CAK12849.1|  502|Caenorhabditis elegans Hypothetical p...    29   3.9  
U50072-4|AAA93451.1|  250|Caenorhabditis elegans Cytochrome p450...    29   3.9  
Z99942-5|CAI79198.1|  178|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z99942-4|CAB17069.1|  541|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z46787-1|CAA86739.2|  360|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z66495-2|CAA91267.2|  502|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AC024792-3|AAF60684.2|  388|Caenorhabditis elegans Hypothetical ...    28   6.8  
AF025451-14|AAB71199.1|  577|Caenorhabditis elegans Hypothetical...    27   9.0  

>Z78539-6|CAB01732.2|  134|Caenorhabditis elegans Hypothetical
           protein C31E10.7 protein.
          Length = 134

 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 33/74 (44%), Positives = 50/74 (67%)
 Frame = +2

Query: 41  EVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAIEW 220
           E+A  + NK   ++I N V+DV  FL++HPGG EVL++ AGSD +E F +VGHS  A   
Sbjct: 11  EIAEHNTNKSAWLVIGNKVFDVTKFLDEHPGGCEVLLEQAGSDGTEAFEDVGHSTDARHM 70

Query: 221 RNTFKVGEIVDEEK 262
           ++ + +GE+V  E+
Sbjct: 71  KDEYLIGEVVASER 84


>AF003141-8|AAK21480.1|  141|Caenorhabditis elegans Hypothetical
           protein W02D3.1 protein.
          Length = 141

 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
 Frame = +2

Query: 56  DNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAIEWRNTFK 235
           D ++   I+I   VYDV  FL +HPGG EV+   AG DA+  F +VGHS+ AIE  N + 
Sbjct: 19  DADQSCWIVISGKVYDVTKFLNEHPGGEEVITQLAGKDATVGFLDVGHSKDAIEMANEYL 78

Query: 236 VGEIVDEE--KLEVKCKQPSAAESAEPLTLGGLLAVYGP-------PVAMAVLAYLLYTF 388
           +G++ + +  K+E    +PS  E +  L       +  P       P  M ++ Y +Y  
Sbjct: 79  IGQLPESDVPKVETAAAKPSKNEKSSSLLNDFTEIMTSPTWTNFLIPTTMGLVIYAVYKC 138

Query: 389 LF 394
           +F
Sbjct: 139 MF 140


>Z81052-7|CAJ58492.1|  103|Caenorhabditis elegans Hypothetical
           protein D2023.1b protein.
          Length = 103

 Score = 65.3 bits (152), Expect = 4e-11
 Identities = 28/62 (45%), Positives = 41/62 (66%)
 Frame = +2

Query: 77  IIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAIEWRNTFKVGEIVDE 256
           II+ N VYDV  F++ HPGG E+L++ AG DA++ F  VGHS  A      FK+G + ++
Sbjct: 22  IIVGNYVYDVTKFVDLHPGGPEILLEFAGGDATDAFESVGHSMCARMMLTKFKIGSLPED 81

Query: 257 EK 262
           E+
Sbjct: 82  ER 83


>AL032654-5|CAD91715.2|  516|Caenorhabditis elegans Hypothetical
           protein Y52B11A.3b protein.
          Length = 516

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +2

Query: 92  VVYDVAAFLEDHPGGTEVLVDNAGSDASECFHE 190
           +VYDV  +L+ HPGG   L+  AG DA+  F++
Sbjct: 42  IVYDVTKYLDFHPGGIPELLRGAGRDATPLFNQ 74


>AL032654-4|CAA21721.2|  552|Caenorhabditis elegans Hypothetical
           protein Y52B11A.3a protein.
          Length = 552

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +2

Query: 92  VVYDVAAFLEDHPGGTEVLVDNAGSDASECFHE 190
           +VYDV  +L+ HPGG   L+  AG DA+  F++
Sbjct: 78  IVYDVTKYLDFHPGGIPELLRGAGRDATPLFNQ 110


>Z81038-3|CAB02759.1|  316|Caenorhabditis elegans Hypothetical
           protein C25A1.5 protein.
          Length = 316

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +2

Query: 56  DNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASE 178
           D  K  L+ +D   YD+A F   HPGG +VL   AG +  E
Sbjct: 6   DEKKPLLVQLDGQYYDIADFAPKHPGGAKVLNRLAGEEIGE 46


>Z81128-3|CAB03401.1|  410|Caenorhabditis elegans Hypothetical
           protein T23D8.3 protein.
          Length = 410

 Score = 33.9 bits (74), Expect = 0.10
 Identities = 24/90 (26%), Positives = 39/90 (43%)
 Frame = +2

Query: 2   ERASCRSTSTQVAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASEC 181
           ERA  R       E+  R+ N   +  +D   YDV   LE + G    L+++ G   +E 
Sbjct: 185 ERADQRVIDNAFEELMDREYNTDQIGELDGDDYDVGGALEPNAGRLHKLINDKGPSNAEY 244

Query: 182 FHEVGHSEIAIEWRNTFKVGEIVDEEKLEV 271
             E+    +  E     + G I D+E+ E+
Sbjct: 245 DEELAKHYVR-ERMRLIEEGVIKDKEEYEI 273


>Z66495-11|CAK12849.1|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.3 protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
 Frame = -2

Query: 267 SNFSSSTISPTL--NVLRHSMAISLWPTSWKHSEASEPALSTRTSVPPGWSSRKAATSYT 94
           SNFS  T  P +  N L+ S+  + + + WKH         TR+++ P +S+ K    + 
Sbjct: 105 SNFSDRTPPPIIEDNKLKESLLQNTYESGWKH---------TRSAIAPIFSTGKMKAMHE 155

Query: 93  TL-SMMIRFCLLLSRAATS 40
           T+ S +  F  +L   A+S
Sbjct: 156 TIHSKVDLFLEILKEKASS 174


>U50072-4|AAA93451.1|  250|Caenorhabditis elegans Cytochrome p450
           family protein 25A6 protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
 Frame = -2

Query: 267 SNFSSSTISPTL--NVLRHSMAISLWPTSWKHSEASEPALSTRTSVPPGWSSRKAATSYT 94
           SNFS  T  P +  N L+ S+  + + + WKH         TR+++ P +S+ K    + 
Sbjct: 105 SNFSDRTPPPIIEDNKLKESLLQNTYESGWKH---------TRSAIAPIFSTGKMKAMHE 155

Query: 93  TL-SMMIRFCLLLSRAATS 40
           T+ S +  F  +L   A+S
Sbjct: 156 TIHSKVDLFLEILKEKASS 174


>Z99942-5|CAI79198.1|  178|Caenorhabditis elegans Hypothetical
           protein H13N06.4b protein.
          Length = 178

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 95  VYDVAAFLEDHPGGTEVLV-DNAGSDASECFHEVGHSEIAIEWRNTFKVGEI 247
           VYDV  F+  HPGG ++L+   A  D     +    ++  +E    +++G++
Sbjct: 105 VYDVTDFIAMHPGGDKILLAAGAAVDPFWALYSQHKTKEVLEILEGYRIGKL 156


>Z99942-4|CAB17069.1|  541|Caenorhabditis elegans Hypothetical
           protein H13N06.4a protein.
          Length = 541

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 95  VYDVAAFLEDHPGGTEVLV-DNAGSDASECFHEVGHSEIAIEWRNTFKVGEI 247
           VYDV  F+  HPGG ++L+   A  D     +    ++  +E    +++G++
Sbjct: 105 VYDVTDFIAMHPGGDKILLAAGAAVDPFWALYSQHKTKEVLEILEGYRIGKL 156


>Z46787-1|CAA86739.2|  360|Caenorhabditis elegans Hypothetical
           protein C16C10.1 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 545 CLSCDVRKPCLLVQSP 592
           C+SC+VRKPC   Q P
Sbjct: 88  CVSCEVRKPCEWYQRP 103


>Z66495-2|CAA91267.2|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.2 protein.
          Length = 502

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = -2

Query: 267 SNFSSSTISPTL--NVLRHSMAISLWPTSWKHS-EASEPALST 148
           SNFS   + P    N L  S+  + + T WKH+  A  P  ST
Sbjct: 105 SNFSDRIVPPIFDSNQLNQSLLQNTYATGWKHTRSAIAPIFST 147


>AC024792-3|AAF60684.2|  388|Caenorhabditis elegans Hypothetical
           protein Y48G1A.3 protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 23/73 (31%), Positives = 29/73 (39%)
 Frame = +2

Query: 101 DVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAIEWRNTFKVGEIVDEEKLEVKCK 280
           DV   L D  G    LV+  G  ASE    VGH E      N   +  I D  + +V  K
Sbjct: 89  DVCRLLMDS-GARMYLVNGIGKTASELAAFVGHHECVAIINNHITIDVIEDLLRPKVNGK 147

Query: 281 QPSAAESAEPLTL 319
              A E  + L +
Sbjct: 148 YEGAEEYPDELAV 160


>AF025451-14|AAB71199.1|  577|Caenorhabditis elegans Hypothetical
           protein C24H12.1 protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 191 VGHSEIAIEWRNTFKVGEIVDEEK 262
           V +S I +EWR+T  +G   D+E+
Sbjct: 472 VKYSPIGVEWRHTVDIGGFKDDEQ 495


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,080,810
Number of Sequences: 27780
Number of extensions: 235790
Number of successful extensions: 743
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)