Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5215
         (419 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0808 - 25414486-25414677,25415114-25415290,25415839-254159...    27   8.1  
01_02_0095 - 11076493-11077644,11077845-11077918,11078155-11078320     27   8.1  

>01_05_0808 -
           25414486-25414677,25415114-25415290,25415839-25415928,
           25416016-25416081,25416170-25416240,25416375-25416450,
           25416567-25420098,25421464-25421834
          Length = 1524

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = +3

Query: 246 SVSNKNKIPYFIGLDLEDFESNRIPSLGVAFPAS 347
           ++SNK+ +   + +D + F +    S+G+ FP+S
Sbjct: 207 NISNKSAMDQVVVVDCDTFANGEKGSMGLTFPSS 240


>01_02_0095 - 11076493-11077644,11077845-11077918,11078155-11078320
          Length = 463

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 255 SKLTNLFAEKKKRNMSNDFKILCSLDTSSRVLDVLKNFIDTQY 127
           SK+ NLF E K+RN+  D    C L  S    + +    +T Y
Sbjct: 182 SKVANLFDEMKERNVQPDELTCCILMRSHAAHNKIDTVKETFY 224


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,876,412
Number of Sequences: 37544
Number of extensions: 190191
Number of successful extensions: 349
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)