Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5214
         (527 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053582-1|AAH53582.1|  525|Homo sapiens solute carrier family 3...    31   3.3  
BC007638-1|AAH07638.1|  724|Homo sapiens KIAA1822-like protein.        31   3.3  
AY358602-1|AAQ88965.1|  724|Homo sapiens LRTS841 protein.              31   3.3  
AY044836-1|AAK98782.1|  525|Homo sapiens vesicular inhibitory am...    31   3.3  
AL592148-3|CAI40465.1|  724|Homo sapiens KIAA1822-like protein.        31   3.3  
AL133519-1|CAC15529.2|  525|Homo sapiens solute carrier family 3...    31   3.3  
AK055051-1|BAB70846.1|  525|Homo sapiens protein ( Homo sapiens ...    31   3.3  
BC036458-1|AAH36458.2|  475|Homo sapiens SLC32A1 protein protein.      29   7.6  

>BC053582-1|AAH53582.1|  525|Homo sapiens solute carrier family 32
           (GABA vesicular transporter), member 1 protein.
          Length = 525

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 391 KNLK*INKFSGAIRIRHFISNILLFCY 471
           KNLK ++KFS    + HF+ NIL+  Y
Sbjct: 258 KNLKAVSKFSLLCTLAHFVINILVIAY 284


>BC007638-1|AAH07638.1|  724|Homo sapiens KIAA1822-like protein.
          Length = 724

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 301 CSETHRNSAISVRKWKLYEYTSFKQRDMC 215
           C + H++  I+ R W + EY   K+ ++C
Sbjct: 69  CCDQHKDRRIAARYWDIMEYFDLKRHELC 97


>AY358602-1|AAQ88965.1|  724|Homo sapiens LRTS841 protein.
          Length = 724

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 301 CSETHRNSAISVRKWKLYEYTSFKQRDMC 215
           C + H++  I+ R W + EY   K+ ++C
Sbjct: 69  CCDQHKDRRIAARYWDIMEYFDLKRHELC 97


>AY044836-1|AAK98782.1|  525|Homo sapiens vesicular inhibitory amino
           acid transporter protein.
          Length = 525

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 391 KNLK*INKFSGAIRIRHFISNILLFCY 471
           KNLK ++KFS    + HF+ NIL+  Y
Sbjct: 258 KNLKAVSKFSLLCTLAHFVINILVIAY 284


>AL592148-3|CAI40465.1|  724|Homo sapiens KIAA1822-like protein.
          Length = 724

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 301 CSETHRNSAISVRKWKLYEYTSFKQRDMC 215
           C + H++  I+ R W + EY   K+ ++C
Sbjct: 69  CCDQHKDRRIAARYWDIMEYFDLKRHELC 97


>AL133519-1|CAC15529.2|  525|Homo sapiens solute carrier family 32
           (GABA vesicular transporter), member 1 protein.
          Length = 525

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 391 KNLK*INKFSGAIRIRHFISNILLFCY 471
           KNLK ++KFS    + HF+ NIL+  Y
Sbjct: 258 KNLKAVSKFSLLCTLAHFVINILVIAY 284


>AK055051-1|BAB70846.1|  525|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30489 fis, clone BRAWH2000142, highly similar to
           Rattus norvegicus vesicular GABA transporter (VGAT)
           mRNA. ).
          Length = 525

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 391 KNLK*INKFSGAIRIRHFISNILLFCY 471
           KNLK ++KFS    + HF+ NIL+  Y
Sbjct: 258 KNLKAVSKFSLLCTLAHFVINILVIAY 284


>BC036458-1|AAH36458.2|  475|Homo sapiens SLC32A1 protein protein.
          Length = 475

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 391 KNLK*INKFSGAIRIRHFISNILLFCY 471
           KNL+ ++KFS    + HF+ NIL+  Y
Sbjct: 208 KNLRAVSKFSLLCTLAHFVINILVIAY 234


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,415,063
Number of Sequences: 237096
Number of extensions: 1302915
Number of successful extensions: 5505
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5505
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)