Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5213
         (376 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   2.7  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   6.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   6.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   8.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    20   8.3  

>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 226 YIYKIRLLVHLLLLQKPCNTLRHL 297
           Y+Y  +LL++   L++  N L HL
Sbjct: 259 YLYSHKLLLNRYYLERLSNDLPHL 282



 Score = 20.2 bits (40), Expect = 8.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 310 NMSFEDALMYYK 275
           NM F+D L+Y+K
Sbjct: 664 NMLFKDILIYHK 675


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = -2

Query: 240 NLVYVMKISKLQSAIT*SVNVLTNHRN 160
           ++VY+ +++KL +A+      LTN ++
Sbjct: 91  SVVYIEQLTKLNNAVEEKRPELTNRKS 117


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 137 RTKNIYRWKRL 105
           + KNIY WK L
Sbjct: 23  KLKNIYSWKAL 33


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 310 NMSFEDALMYYK 275
           NM F+D L+Y+K
Sbjct: 664 NMLFKDILIYHK 675


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -2

Query: 240 NLVYVMKISKLQSAIT*SVNVLTNHR 163
           ++VY+ +++KL +A+      LTN +
Sbjct: 213 SVVYIEQLTKLNNAVEEKRPELTNRK 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,637
Number of Sequences: 438
Number of extensions: 1056
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)