Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5210
         (473 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    27   0.44 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   5.4  
AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.         22   9.5  

>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 26.6 bits (56), Expect = 0.44
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +1

Query: 328 SREMNFSSIESMDRFRLEQKVLFKGRCLEEWFFDFWLCDP 447
           S+    + IE+M    +E  V  K   +  W+ +FW  DP
Sbjct: 122 SQREKVAKIETMQYLPVEGPVNLKTPDVHYWYIEFWGLDP 161


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 11/62 (17%), Positives = 29/62 (46%)
 Frame = +1

Query: 154  RDKNDRVETILKGFQINWMNLRDADTGKILWQHNEDMSSPDAEHEARVPKRILKCRVVSR 333
            R  +D +  I+  F+ N  ++++ +    LW++  D+     E + ++ +       + R
Sbjct: 856  RTVDDELLEIISDFKNNVFSIQEVEQLVTLWKNRNDVQKSFREKQDQLARMREHYEQIQR 915

Query: 334  EM 339
            E+
Sbjct: 916  EL 917


>AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 196 QINWMNLRDADTGKILWQHNEDMSSPDAEHEARVPKRI-LKC 318
           Q++ + LRD + G +  +H   + +PD  +  +  K++ L C
Sbjct: 2   QVDGLKLRDIEQGFMSRRHTFGLFNPDGRNVYKDYKQLELSC 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,746
Number of Sequences: 2352
Number of extensions: 8085
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)