Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5210
(473 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456980-1|CAG33261.1| 150|Homo sapiens PDE6D protein. 154 2e-37
BT007278-1|AAP35942.1| 150|Homo sapiens phosphodiesterase 6D, c... 154 2e-37
BC007831-1|AAH07831.1| 150|Homo sapiens phosphodiesterase 6D, c... 154 2e-37
AJ001626-1|CAA04880.1| 150|Homo sapiens p17 protein protein. 154 2e-37
AF045999-1|AAC39720.1| 150|Homo sapiens rod cGMP phosphodiester... 154 2e-37
AF042835-1|AAC25953.1| 150|Homo sapiens phosphodiesterase delta... 154 2e-37
AF022912-1|AAB87872.1| 150|Homo sapiens cGMP phosphodiesterase ... 154 2e-37
AC073476-3|AAY24151.1| 150|Homo sapiens unknown protein. 154 2e-37
>CR456980-1|CAG33261.1| 150|Homo sapiens PDE6D protein.
Length = 150
Score = 154 bits (373), Expect = 2e-37
Identities = 66/96 (68%), Positives = 80/96 (83%)
Frame = +1
Query: 160 KNDRVETILKGFQINWMNLRDADTGKILWQHNEDMSSPDAEHEARVPKRILKCRVVSREM 339
K++R IL+GF++NWMNLRDA+TGKILWQ ED+S P EHEARVPK+ILKC+ VSRE+
Sbjct: 4 KDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSREL 63
Query: 340 NFSSIESMDRFRLEQKVLFKGRCLEEWFFDFWLCDP 447
NFSS E M++FRLEQKV FKG+CLEEWFF+F P
Sbjct: 64 NFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIP 99
Score = 37.5 bits (83), Expect = 0.023
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2
Query: 383 RKYSSKGDV*KSGFSIFGYVIPNSTNTWQS 472
+K KG + F FG+VIPNSTNTWQS
Sbjct: 78 QKVYFKGQCLEEWFFEFGFVIPNSTNTWQS 107
>BT007278-1|AAP35942.1| 150|Homo sapiens phosphodiesterase 6D,
cGMP-specific, rod, delta protein.
Length = 150
Score = 154 bits (373), Expect = 2e-37
Identities = 66/96 (68%), Positives = 80/96 (83%)
Frame = +1
Query: 160 KNDRVETILKGFQINWMNLRDADTGKILWQHNEDMSSPDAEHEARVPKRILKCRVVSREM 339
K++R IL+GF++NWMNLRDA+TGKILWQ ED+S P EHEARVPK+ILKC+ VSRE+
Sbjct: 4 KDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSREL 63
Query: 340 NFSSIESMDRFRLEQKVLFKGRCLEEWFFDFWLCDP 447
NFSS E M++FRLEQKV FKG+CLEEWFF+F P
Sbjct: 64 NFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIP 99
Score = 37.5 bits (83), Expect = 0.023
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2
Query: 383 RKYSSKGDV*KSGFSIFGYVIPNSTNTWQS 472
+K KG + F FG+VIPNSTNTWQS
Sbjct: 78 QKVYFKGQCLEEWFFEFGFVIPNSTNTWQS 107
>BC007831-1|AAH07831.1| 150|Homo sapiens phosphodiesterase 6D,
cGMP-specific, rod, delta protein.
Length = 150
Score = 154 bits (373), Expect = 2e-37
Identities = 66/96 (68%), Positives = 80/96 (83%)
Frame = +1
Query: 160 KNDRVETILKGFQINWMNLRDADTGKILWQHNEDMSSPDAEHEARVPKRILKCRVVSREM 339
K++R IL+GF++NWMNLRDA+TGKILWQ ED+S P EHEARVPK+ILKC+ VSRE+
Sbjct: 4 KDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSREL 63
Query: 340 NFSSIESMDRFRLEQKVLFKGRCLEEWFFDFWLCDP 447
NFSS E M++FRLEQKV FKG+CLEEWFF+F P
Sbjct: 64 NFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIP 99
Score = 37.5 bits (83), Expect = 0.023
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2
Query: 383 RKYSSKGDV*KSGFSIFGYVIPNSTNTWQS 472
+K KG + F FG+VIPNSTNTWQS
Sbjct: 78 QKVYFKGQCLEEWFFEFGFVIPNSTNTWQS 107
>AJ001626-1|CAA04880.1| 150|Homo sapiens p17 protein protein.
Length = 150
Score = 154 bits (373), Expect = 2e-37
Identities = 66/96 (68%), Positives = 80/96 (83%)
Frame = +1
Query: 160 KNDRVETILKGFQINWMNLRDADTGKILWQHNEDMSSPDAEHEARVPKRILKCRVVSREM 339
K++R IL+GF++NWMNLRDA+TGKILWQ ED+S P EHEARVPK+ILKC+ VSRE+
Sbjct: 4 KDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSREL 63
Query: 340 NFSSIESMDRFRLEQKVLFKGRCLEEWFFDFWLCDP 447
NFSS E M++FRLEQKV FKG+CLEEWFF+F P
Sbjct: 64 NFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIP 99
Score = 37.5 bits (83), Expect = 0.023
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2
Query: 383 RKYSSKGDV*KSGFSIFGYVIPNSTNTWQS 472
+K KG + F FG+VIPNSTNTWQS
Sbjct: 78 QKVYFKGQCLEEWFFEFGFVIPNSTNTWQS 107
>AF045999-1|AAC39720.1| 150|Homo sapiens rod cGMP phosphodiesterase
delta subunit protein.
Length = 150
Score = 154 bits (373), Expect = 2e-37
Identities = 66/96 (68%), Positives = 80/96 (83%)
Frame = +1
Query: 160 KNDRVETILKGFQINWMNLRDADTGKILWQHNEDMSSPDAEHEARVPKRILKCRVVSREM 339
K++R IL+GF++NWMNLRDA+TGKILWQ ED+S P EHEARVPK+ILKC+ VSRE+
Sbjct: 4 KDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSREL 63
Query: 340 NFSSIESMDRFRLEQKVLFKGRCLEEWFFDFWLCDP 447
NFSS E M++FRLEQKV FKG+CLEEWFF+F P
Sbjct: 64 NFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIP 99
Score = 37.5 bits (83), Expect = 0.023
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2
Query: 383 RKYSSKGDV*KSGFSIFGYVIPNSTNTWQS 472
+K KG + F FG+VIPNSTNTWQS
Sbjct: 78 QKVYFKGQCLEEWFFEFGFVIPNSTNTWQS 107
>AF042835-1|AAC25953.1| 150|Homo sapiens phosphodiesterase delta
subunit protein.
Length = 150
Score = 154 bits (373), Expect = 2e-37
Identities = 66/96 (68%), Positives = 80/96 (83%)
Frame = +1
Query: 160 KNDRVETILKGFQINWMNLRDADTGKILWQHNEDMSSPDAEHEARVPKRILKCRVVSREM 339
K++R IL+GF++NWMNLRDA+TGKILWQ ED+S P EHEARVPK+ILKC+ VSRE+
Sbjct: 4 KDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSREL 63
Query: 340 NFSSIESMDRFRLEQKVLFKGRCLEEWFFDFWLCDP 447
NFSS E M++FRLEQKV FKG+CLEEWFF+F P
Sbjct: 64 NFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIP 99
Score = 37.5 bits (83), Expect = 0.023
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2
Query: 383 RKYSSKGDV*KSGFSIFGYVIPNSTNTWQS 472
+K KG + F FG+VIPNSTNTWQS
Sbjct: 78 QKVYFKGQCLEEWFFEFGFVIPNSTNTWQS 107
>AF022912-1|AAB87872.1| 150|Homo sapiens cGMP phosphodiesterase
delta subunit protein.
Length = 150
Score = 154 bits (373), Expect = 2e-37
Identities = 66/96 (68%), Positives = 80/96 (83%)
Frame = +1
Query: 160 KNDRVETILKGFQINWMNLRDADTGKILWQHNEDMSSPDAEHEARVPKRILKCRVVSREM 339
K++R IL+GF++NWMNLRDA+TGKILWQ ED+S P EHEARVPK+ILKC+ VSRE+
Sbjct: 4 KDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSREL 63
Query: 340 NFSSIESMDRFRLEQKVLFKGRCLEEWFFDFWLCDP 447
NFSS E M++FRLEQKV FKG+CLEEWFF+F P
Sbjct: 64 NFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIP 99
Score = 37.5 bits (83), Expect = 0.023
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2
Query: 383 RKYSSKGDV*KSGFSIFGYVIPNSTNTWQS 472
+K KG + F FG+VIPNSTNTWQS
Sbjct: 78 QKVYFKGQCLEEWFFEFGFVIPNSTNTWQS 107
>AC073476-3|AAY24151.1| 150|Homo sapiens unknown protein.
Length = 150
Score = 154 bits (373), Expect = 2e-37
Identities = 66/96 (68%), Positives = 80/96 (83%)
Frame = +1
Query: 160 KNDRVETILKGFQINWMNLRDADTGKILWQHNEDMSSPDAEHEARVPKRILKCRVVSREM 339
K++R IL+GF++NWMNLRDA+TGKILWQ ED+S P EHEARVPK+ILKC+ VSRE+
Sbjct: 4 KDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSREL 63
Query: 340 NFSSIESMDRFRLEQKVLFKGRCLEEWFFDFWLCDP 447
NFSS E M++FRLEQKV FKG+CLEEWFF+F P
Sbjct: 64 NFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIP 99
Score = 37.5 bits (83), Expect = 0.023
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2
Query: 383 RKYSSKGDV*KSGFSIFGYVIPNSTNTWQS 472
+K KG + F FG+VIPNSTNTWQS
Sbjct: 78 QKVYFKGQCLEEWFFEFGFVIPNSTNTWQS 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,468,443
Number of Sequences: 237096
Number of extensions: 1149732
Number of successful extensions: 2059
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2059
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -