Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5205
         (309 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0426 - 17817975-17818582,17819068-17819209,17819648-178197...    26   6.9  
09_02_0082 - 4060018-4061604                                           26   6.9  
03_02_0343 - 7649210-7650154                                           26   6.9  
12_01_0651 - 5507935-5509638                                           25   9.2  
07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323     25   9.2  
04_03_0624 - 18115559-18115725,18115993-18116872                       25   9.2  

>10_08_0426 - 17817975-17818582,17819068-17819209,17819648-17819745,
            17820070-17821897,17822331-17822738,17822891-17822943,
            17823461-17823877,17824401-17824605
          Length = 1252

 Score = 25.8 bits (54), Expect = 6.9
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +2

Query: 89   NAFRFEGWGSRNYTETLELISQGGWRIYVVDVYGLQYPLN 208
            N + F G+ +  Y++  + +S+G W++    +  L +P N
Sbjct: 1213 NLWFFLGFSNWEYSQLFDELSEGAWQVSEEPIEHLVWPEN 1252


>09_02_0082 - 4060018-4061604
          Length = 528

 Score = 25.8 bits (54), Expect = 6.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 48  PCGLTRGPTTSHYA 7
           P GLT  PTT+HY+
Sbjct: 122 PLGLTMSPTTAHYS 135


>03_02_0343 - 7649210-7650154
          Length = 314

 Score = 25.8 bits (54), Expect = 6.9
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 116 SRNYTETLELISQGGWRI 169
           S+N+ ETLEL+ +G  RI
Sbjct: 141 SQNFLETLELVDEGDMRI 158


>12_01_0651 - 5507935-5509638
          Length = 567

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = -1

Query: 294 ANWVPGPPSSXXXXXXXLIWVDELTAHLMLSGYWS 190
           A W+   P           WV + T   M +GYW+
Sbjct: 133 ALWIVRGPGGEKWSVLNRAWVQDATIRKMNNGYWT 167


>07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323
          Length = 340

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1

Query: 7   CVMAGGRTSCESARVGT 57
           C   GGR SCES   GT
Sbjct: 151 CATGGGRFSCESGDCGT 167


>04_03_0624 - 18115559-18115725,18115993-18116872
          Length = 348

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 179 DVYGLQYPLNIRWAVSSST 235
           D YG Q PL + WA+ + T
Sbjct: 224 DYYGGQAPLRVDWAIGNKT 242


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,641,348
Number of Sequences: 37544
Number of extensions: 231317
Number of successful extensions: 377
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)