Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5205
         (309 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99961-1|CAA68226.1|  152|Homo sapiens unknown protein.                28   6.4  
BC048302-1|AAH48302.1|  374|Homo sapiens solute carrier family 3...    28   6.4  
BC039195-1|AAH39195.1|  374|Homo sapiens solute carrier family 3...    28   6.4  
AK128062-1|BAC87256.1|  357|Homo sapiens protein ( Homo sapiens ...    28   6.4  
AK023080-1|BAB14394.1|  374|Homo sapiens protein ( Homo sapiens ...    28   6.4  

>X99961-1|CAA68226.1|  152|Homo sapiens unknown protein.
          Length = 152

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -2

Query: 167 CATHLEI*VLRSQYSYGCPTLQTEMHYCFTTEIVRVVVPTRADSQEVL 24
           C T +    L  +Y    P LQ+ ++YC    I  V++  R+ S  +L
Sbjct: 42  CGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLL 89


>BC048302-1|AAH48302.1|  374|Homo sapiens solute carrier family 35,
           member F2 protein.
          Length = 374

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -2

Query: 167 CATHLEI*VLRSQYSYGCPTLQTEMHYCFTTEIVRVVVPTRADSQEVL 24
           C T +    L  +Y    P LQ+ ++YC    I  V++  R+ S  +L
Sbjct: 54  CGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLL 101


>BC039195-1|AAH39195.1|  374|Homo sapiens solute carrier family 35,
           member F2 protein.
          Length = 374

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -2

Query: 167 CATHLEI*VLRSQYSYGCPTLQTEMHYCFTTEIVRVVVPTRADSQEVL 24
           C T +    L  +Y    P LQ+ ++YC    I  V++  R+ S  +L
Sbjct: 54  CGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLL 101


>AK128062-1|BAC87256.1|  357|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46182 fis, clone TESTI4004539. ).
          Length = 357

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -2

Query: 167 CATHLEI*VLRSQYSYGCPTLQTEMHYCFTTEIVRVVVPTRADSQEVL 24
           C T +    L  +Y    P LQ+ ++YC    I  V++  R+ S  +L
Sbjct: 54  CGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLL 101


>AK023080-1|BAB14394.1|  374|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13018 fis, clone NT2RP3000685. ).
          Length = 374

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -2

Query: 167 CATHLEI*VLRSQYSYGCPTLQTEMHYCFTTEIVRVVVPTRADSQEVL 24
           C T +    L  +Y    P LQ+ ++YC    I  V++  R+ S  +L
Sbjct: 54  CGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLL 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,520,813
Number of Sequences: 237096
Number of extensions: 1238663
Number of successful extensions: 1999
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1999
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)