Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5200
         (430 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX000688-9|CAI18606.1|  961|Homo sapiens gamma-aminobutyric acid...    31   1.7  
AL662826-9|CAI17390.1|  961|Homo sapiens gamma-aminobutyric acid...    31   1.7  
AL645936-8|CAI18017.1|  961|Homo sapiens gamma-aminobutyric acid...    31   1.7  
AL031983-8|CAA21453.1|  961|Homo sapiens gamma-aminobutyric acid...    31   1.7  
AJ225028-1|CAA12359.1|  961|Homo sapiens GABA-B receptor protein.      31   1.7  
AJ012288-1|CAA09980.1|  961|Homo sapiens GABA-BR1 protein.             31   1.7  
AJ012185-1|CAA09939.1|  961|Homo sapiens GABAB receptor, subunit...    31   1.7  
AJ010170-1|CAA09031.1|  930|Homo sapiens gababr1 protein.              31   1.7  
AF301005-1|AAG23962.1|  578|Homo sapiens gamma-aminobutyric acid...    31   1.7  
AF099148-1|AAC98508.1|  961|Homo sapiens GABA-B1a receptor protein.    31   1.7  
BC101797-1|AAI01798.1|  323|Homo sapiens taste receptor, type 2,...    29   5.1  
BC101795-1|AAI01796.1|  323|Homo sapiens taste receptor, type 2,...    29   5.1  
AY724957-1|AAU21153.1|  323|Homo sapiens taste receptor T2R40 pr...    29   5.1  
AY358556-1|AAQ88920.1|  607|Homo sapiens ERG-1 protein.                29   5.1  
AY260047-1|AAP15458.1|  607|Homo sapiens transmembrane protein U...    29   5.1  
AL359747-4|CAH70006.1|  607|Homo sapiens CUB and zona pellucida-...    29   5.1  
AF494229-1|AAM19320.1|  323|Homo sapiens candidate taste recepto...    29   5.1  
AB199169-1|BAD98043.1|  305|Homo sapiens bitter taste receptor T...    29   5.1  
AB199168-1|BAD98042.1|  306|Homo sapiens bitter taste receptor T...    29   5.1  
AB199167-1|BAD98041.1|  306|Homo sapiens bitter taste receptor T...    29   5.1  

>BX000688-9|CAI18606.1|  961|Homo sapiens gamma-aminobutyric acid
           (GABA) B receptor, 1 protein.
          Length = 961

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 RAVCSSNEFAEPKPHCYLN 325
           R++CS  +++ PKPHC +N
Sbjct: 142 RSICSQGQWSTPKPHCQVN 160


>AL662826-9|CAI17390.1|  961|Homo sapiens gamma-aminobutyric acid
           (GABA) B receptor, 1 protein.
          Length = 961

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 RAVCSSNEFAEPKPHCYLN 325
           R++CS  +++ PKPHC +N
Sbjct: 142 RSICSQGQWSTPKPHCQVN 160


>AL645936-8|CAI18017.1|  961|Homo sapiens gamma-aminobutyric acid
           (GABA) B receptor, 1 protein.
          Length = 961

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 RAVCSSNEFAEPKPHCYLN 325
           R++CS  +++ PKPHC +N
Sbjct: 142 RSICSQGQWSTPKPHCQVN 160


>AL031983-8|CAA21453.1|  961|Homo sapiens gamma-aminobutyric acid
           (GABA) B receptor, 1 protein.
          Length = 961

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 RAVCSSNEFAEPKPHCYLN 325
           R++CS  +++ PKPHC +N
Sbjct: 142 RSICSQGQWSTPKPHCQVN 160


>AJ225028-1|CAA12359.1|  961|Homo sapiens GABA-B receptor protein.
          Length = 961

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 RAVCSSNEFAEPKPHCYLN 325
           R++CS  +++ PKPHC +N
Sbjct: 142 RSICSQGQWSTPKPHCQVN 160


>AJ012288-1|CAA09980.1|  961|Homo sapiens GABA-BR1 protein.
          Length = 961

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 RAVCSSNEFAEPKPHCYLN 325
           R++CS  +++ PKPHC +N
Sbjct: 142 RSICSQGQWSTPKPHCQVN 160


>AJ012185-1|CAA09939.1|  961|Homo sapiens GABAB receptor, subunit 1a
           protein.
          Length = 961

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 RAVCSSNEFAEPKPHCYLN 325
           R++CS  +++ PKPHC +N
Sbjct: 142 RSICSQGQWSTPKPHCQVN 160


>AJ010170-1|CAA09031.1|  930|Homo sapiens gababr1 protein.
          Length = 930

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 RAVCSSNEFAEPKPHCYLN 325
           R++CS  +++ PKPHC +N
Sbjct: 142 RSICSQGQWSTPKPHCQVN 160


>AF301005-1|AAG23962.1|  578|Homo sapiens gamma-aminobutyric acid
           receptor GABA-B1e protein.
          Length = 578

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 RAVCSSNEFAEPKPHCYLN 325
           R++CS  +++ PKPHC +N
Sbjct: 142 RSICSQGQWSTPKPHCQVN 160


>AF099148-1|AAC98508.1|  961|Homo sapiens GABA-B1a receptor protein.
          Length = 961

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 269 RAVCSSNEFAEPKPHCYLN 325
           R++CS  +++ PKPHC +N
Sbjct: 142 RSICSQGQWSTPKPHCQVN 160


>BC101797-1|AAI01798.1|  323|Homo sapiens taste receptor, type 2,
           member 40 protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 189 CLTFVLHNSIVMEF*GISLSRLNPLPTGQCVPVMSSLSRNLIVILIDYTRAFRDFF-VLY 365
           C+T +L +  +    G   +R   LPTG  + +M S SR L+ I +     F   F ++Y
Sbjct: 29  CITGILGSGFITAIYGAEWARGKTLPTGDRIMLMLSFSRLLLQIWMMLENIFSLLFRIVY 88

Query: 366 S 368
           +
Sbjct: 89  N 89


>BC101795-1|AAI01796.1|  323|Homo sapiens taste receptor, type 2,
           member 40 protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 189 CLTFVLHNSIVMEF*GISLSRLNPLPTGQCVPVMSSLSRNLIVILIDYTRAFRDFF-VLY 365
           C+T +L +  +    G   +R   LPTG  + +M S SR L+ I +     F   F ++Y
Sbjct: 29  CITGILGSGFITAIYGAEWARGKTLPTGDRIMLMLSFSRLLLQIWMMLENIFSLLFRIVY 88

Query: 366 S 368
           +
Sbjct: 89  N 89


>AY724957-1|AAU21153.1|  323|Homo sapiens taste receptor T2R40
           protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 189 CLTFVLHNSIVMEF*GISLSRLNPLPTGQCVPVMSSLSRNLIVILIDYTRAFRDFF-VLY 365
           C+T +L +  +    G   +R   LPTG  + +M S SR L+ I +     F   F ++Y
Sbjct: 29  CITGILGSGFITAIYGAEWARGKTLPTGDRIMLMLSFSRLLLQIWMMLENIFSLLFRIVY 88

Query: 366 S 368
           +
Sbjct: 89  N 89


>AY358556-1|AAQ88920.1|  607|Homo sapiens ERG-1 protein.
          Length = 607

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 270 GQCVPVMSSLSRNLIVIL-IDYTRAFRDFFVLYSSKFSE 383
           G+  P   S S +L V+L  DY  ++R F   Y+S ++E
Sbjct: 230 GRVTPTFESSSNSLTVVLSTDYANSYRGFSASYTSIYAE 268


>AY260047-1|AAP15458.1|  607|Homo sapiens transmembrane protein
           UO-44D protein.
          Length = 607

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 270 GQCVPVMSSLSRNLIVIL-IDYTRAFRDFFVLYSSKFSE 383
           G+  P   S S +L V+L  DY  ++R F   Y+S ++E
Sbjct: 230 GRVTPTFESSSNSLTVVLSTDYANSYRGFSASYTSIYAE 268


>AL359747-4|CAH70006.1|  607|Homo sapiens CUB and zona
           pellucida-like domains 1 protein.
          Length = 607

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 270 GQCVPVMSSLSRNLIVIL-IDYTRAFRDFFVLYSSKFSE 383
           G+  P   S S +L V+L  DY  ++R F   Y+S ++E
Sbjct: 230 GRVTPTFESSSNSLTVVLSTDYANSYRGFSASYTSIYAE 268


>AF494229-1|AAM19320.1|  323|Homo sapiens candidate taste receptor
           TAS2R40 protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 189 CLTFVLHNSIVMEF*GISLSRLNPLPTGQCVPVMSSLSRNLIVILIDYTRAFRDFF-VLY 365
           C+T +L +  +    G   +R   LPTG  + +M S SR L+ I +     F   F ++Y
Sbjct: 29  CITGILGSGFITAIYGAEWARGKTLPTGDRIMLMLSFSRLLLQIWMMLENIFSLLFRIVY 88

Query: 366 S 368
           +
Sbjct: 89  N 89


>AB199169-1|BAD98043.1|  305|Homo sapiens bitter taste receptor
           T2R40 protein.
          Length = 305

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 189 CLTFVLHNSIVMEF*GISLSRLNPLPTGQCVPVMSSLSRNLIVILIDYTRAFRDFF-VLY 365
           C+T +L +  +    G   +R   LPTG  + +M S SR L+ I +     F   F ++Y
Sbjct: 18  CITGILGSGFITAIYGAEWARGKTLPTGDRIMLMLSFSRLLLQIWMMLENIFSLLFRIVY 77

Query: 366 S 368
           +
Sbjct: 78  N 78


>AB199168-1|BAD98042.1|  306|Homo sapiens bitter taste receptor
           T2R40 protein.
          Length = 306

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 189 CLTFVLHNSIVMEF*GISLSRLNPLPTGQCVPVMSSLSRNLIVILIDYTRAFRDFF-VLY 365
           C+T +L +  +    G   +R   LPTG  + +M S SR L+ I +     F   F ++Y
Sbjct: 19  CITGILGSGFITAIYGAEWARGKTLPTGDRIMLMLSFSRLLLQIWMMLENIFSLLFRIVY 78

Query: 366 S 368
           +
Sbjct: 79  N 79


>AB199167-1|BAD98041.1|  306|Homo sapiens bitter taste receptor
           T2R40 protein.
          Length = 306

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 189 CLTFVLHNSIVMEF*GISLSRLNPLPTGQCVPVMSSLSRNLIVILIDYTRAFRDFF-VLY 365
           C+T +L +  +    G   +R   LPTG  + +M S SR L+ I +     F   F ++Y
Sbjct: 19  CITGILGSGFITAIYGAEWARGKTLPTGDRIMLMLSFSRLLLQIWMMLENIFSLLFRIVY 78

Query: 366 S 368
           +
Sbjct: 79  N 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,182,197
Number of Sequences: 237096
Number of extensions: 1114469
Number of successful extensions: 1243
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)