Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5197
         (458 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0064 + 40834649-40834786,40834934-40834997,40835333-408353...    27   5.5  
07_03_0394 - 17633753-17636788                                         27   7.3  

>01_07_0064 +
           40834649-40834786,40834934-40834997,40835333-40835391,
           40835602-40835677,40835775-40835846,40837641-40837728,
           40838239-40838497,40838766-40839000,40839447-40839470,
           40839910-40839997,40840110-40840300,40841082-40841322,
           40841803-40842556
          Length = 762

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 185 ILRSFNVYCDTNVIGKQFGDTDCHWLEV 268
           IL  F  Y D  V  K+FGD   HW+ +
Sbjct: 165 ILEDFKAYAD--VCFKEFGDRVAHWITI 190


>07_03_0394 - 17633753-17636788
          Length = 1011

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 146 RTHLYP*RR*QLAILRSFNVYCDTNVIGKQFGDTDCHW 259
           R+HL+  RR +    R   V+      GK FGD  C W
Sbjct: 796 RSHLWSMRRSKANFFRLMQVFSGFIAAGKWFGDV-CQW 832


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,787,391
Number of Sequences: 37544
Number of extensions: 190747
Number of successful extensions: 358
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)