Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5195
         (515 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   2.5  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   7.5  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   10.0 
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   10.0 

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 143 NSAATFCLLI*QLFFIYKLRSYSFFLIPQL 232
           +SA    L I   F +Y+L +  FFLIP L
Sbjct: 197 DSAMCAMLTIYADFPLYELSTIIFFLIPML 226


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 182 FFIYKLRSYSFFLIPQLY 235
           F +Y+L    FFLIP ++
Sbjct: 203 FPLYQLSCILFFLIPMVF 220


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 292 FNFVAKCFFKISSYVLIINL 351
           FN + KCF K  +   ++NL
Sbjct: 116 FNKLVKCFGKYKTMKEVLNL 135


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 292 FNFVAKCFFKISSYVLIINL 351
           FN + KCF K  +   ++NL
Sbjct: 116 FNKLVKCFGKYKTMKEVLNL 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,972
Number of Sequences: 438
Number of extensions: 1788
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)