Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5185
(526 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 32 0.29
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 32 0.29
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.29
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.29
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr... 28 3.6
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 3.6
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 28 3.6
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 28 3.6
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 28 3.6
Z95559-17|CAL44975.1| 331|Caenorhabditis elegans Hypothetical p... 28 4.7
Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical pr... 27 6.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 6.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 6.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 6.2
Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z46381-10|CAE17898.2| 366|Caenorhabditis elegans Hypothetical p... 27 8.2
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 27 8.2
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 27 8.2
AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown prote... 27 8.2
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 367 DYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKMVADNRWYQVIVDR 221
DY+ I+ G P + +D+GD+ PA V +D V D W ++ ++R
Sbjct: 2751 DYVAAEIEYGRPKITVDLGDA------PAVVKLDTPVNDGLWRRLNIER 2793
Score = 30.3 bits (65), Expect = 0.88
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = -2
Query: 279 GSPLTRWLPTTAGTKSSLTGNSTEPRDKLISSQXGPQEYRFDGRGYATMAGRGYLTPQSN 100
G P+ W G +++ G +P+ I+ DG GY + + ++
Sbjct: 2865 GEPIGLWNSREKGN-TNVNGAQKKPK---ITDNADELVVSLDGEGYTSYKPSHWNPRKAT 2920
Query: 99 QVLLFFRTYAPNGLIYLL 46
++ L F T++P+GL++ +
Sbjct: 2921 KISLSFLTFSPHGLLFFV 2938
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 367 DYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKMVADNRWYQVIVDR 221
DY+ I+ G P + +D+GD+ PA V +D V D W ++ ++R
Sbjct: 2751 DYVAAEIEYGRPKITVDLGDA------PAVVKLDTPVNDGLWRRLNIER 2793
Score = 30.3 bits (65), Expect = 0.88
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = -2
Query: 279 GSPLTRWLPTTAGTKSSLTGNSTEPRDKLISSQXGPQEYRFDGRGYATMAGRGYLTPQSN 100
G P+ W G +++ G +P+ I+ DG GY + + ++
Sbjct: 2865 GEPIGLWNSREKGN-TNVNGAQKKPK---ITDNADELVVSLDGEGYTSYKPSHWNPRKAT 2920
Query: 99 QVLLFFRTYAPNGLIYLL 46
++ L F T++P+GL++ +
Sbjct: 2921 KISLSFLTFSPHGLLFFV 2938
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 367 DYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKMVADNRWYQVIVDR 221
DY+ I+ G P + +D+GD+ PA V +D V D W ++ ++R
Sbjct: 565 DYVAAEIEYGRPKITVDLGDA------PAVVKLDTPVNDGLWRRLNIER 607
Score = 30.3 bits (65), Expect = 0.88
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = -2
Query: 279 GSPLTRWLPTTAGTKSSLTGNSTEPRDKLISSQXGPQEYRFDGRGYATMAGRGYLTPQSN 100
G P+ W G +++ G +P+ I+ DG GY + + ++
Sbjct: 679 GEPIGLWNSREKGN-TNVNGAQKKPK---ITDNADELVVSLDGEGYTSYKPSHWNPRKAT 734
Query: 99 QVLLFFRTYAPNGLIYLL 46
++ L F T++P+GL++ +
Sbjct: 735 KISLSFLTFSPHGLLFFV 752
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 367 DYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKMVADNRWYQVIVDR 221
DY+ I+ G P + +D+GD+ PA V +D V D W ++ ++R
Sbjct: 2751 DYVAAEIEYGRPKITVDLGDA------PAVVKLDTPVNDGLWRRLNIER 2793
Score = 30.3 bits (65), Expect = 0.88
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = -2
Query: 279 GSPLTRWLPTTAGTKSSLTGNSTEPRDKLISSQXGPQEYRFDGRGYATMAGRGYLTPQSN 100
G P+ W G +++ G +P+ I+ DG GY + + ++
Sbjct: 2865 GEPIGLWNSREKGN-TNVNGAQKKPK---ITDNADELVVSLDGEGYTSYKPSHWNPRKAT 2920
Query: 99 QVLLFFRTYAPNGLIYLL 46
++ L F T++P+GL++ +
Sbjct: 2921 KISLSFLTFSPHGLLFFV 2938
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 367 DYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKMVADNRWYQVIVDR 221
DY+ I+ G P + +D+GD+ PA V +D V D W ++ ++R
Sbjct: 2751 DYVAAEIEYGRPKITVDLGDA------PAVVKLDTPVNDGLWRRLNIER 2793
Score = 30.3 bits (65), Expect = 0.88
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = -2
Query: 279 GSPLTRWLPTTAGTKSSLTGNSTEPRDKLISSQXGPQEYRFDGRGYATMAGRGYLTPQSN 100
G P+ W G +++ G +P+ I+ DG GY + + ++
Sbjct: 2865 GEPIGLWNSREKGN-TNVNGAQKKPK---ITDNADELVVSLDGEGYTSYKPSHWNPRKAT 2920
Query: 99 QVLLFFRTYAPNGLIYLL 46
++ L F T++P+GL++ +
Sbjct: 2921 KISLSFLTFSPHGLLFFV 2938
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 31.1 bits (67), Expect = 0.50
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +1
Query: 211 CGVTCQR*LGTSGCRQPSCQWRPSPDPGQVRSCPRCPSLHTGIRSECRSPCSRPKKRECE 390
C TCQ+ TS C P+ P + +C + + T +C C + +++C
Sbjct: 105 CQSTCQQSCQTSSCYTPTTPAPVQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQCQQQCV 164
Query: 391 ILKIVLKC-CEC-VTCVSVC 444
+ + +C +C CV C
Sbjct: 165 QTQPIQQCQPQCQQQCVQQC 184
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.67
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +1
Query: 211 CGVTCQR*LGTSGCRQPSCQWRPSPDPGQVRSCPRCPSLHTGIRSECRSPCSRPKKRECE 390
C TCQ+ TS C P+ P + +C + + T +C C + +++C
Sbjct: 105 CQSTCQQSCQTSSCYTPTTPAPVQCQPSCMPACEQSCVVQTPAPVQCVPQCQQQCQQQCV 164
Query: 391 ILKIVLKC-CEC-VTCVSVC 444
+ + +C +C CV C
Sbjct: 165 QTQPIQQCQPQCQQQCVQQC 184
>Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical
protein C09G5.1 protein.
Length = 473
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 204 WVLWSYLSTMTWYQ-RLSATILSMETLAGSWPGSELSPMSITTYGY 338
+++W Y + WY R+S T+L M+ LA S+ + I +Y Y
Sbjct: 144 FLVWIYPNGTVWYDCRISLTVLCMQDLARYPLDSQNCGLRILSYAY 189
>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical
protein F20B10.1 protein.
Length = 1180
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -1
Query: 367 DYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKMVADNRWYQV 233
D ++ I +G +V+ D G + P+R+S K + D RW+++
Sbjct: 171 DVLIAQIIHGTVHVIFDFGSLT-----PSRISAGKALDDGRWHEM 210
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 328 HTGIRSECRSPCSRPKKRECEILKIVLKCCECVTCVSVCFYD 453
H+G + C+ P +R CE ++ + V+C+SV Y+
Sbjct: 1653 HSGFEGDGIKKCTNPLERSCEDVEKFCGRVDHVSCLSVRIYN 1694
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Frame = +1
Query: 256 QPSCQWRPSPDPGQVRSC-----PRCPSLHTGIRSECRSPCSRPKKRECEILKIVLKCC- 417
QP Q +P V+ C P+ +++ GI ++C C + +++C + ++ ++ C
Sbjct: 166 QPIQQCQPQCQQQCVQQCAPTVAPQVINVNLGISAQCAPQCQQQCQQQCLLQQVPVQQCY 225
Query: 418 -ECV-TCVSVC 444
EC C + C
Sbjct: 226 QECTQPCQTTC 236
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Frame = +1
Query: 256 QPSCQWRPSPDPGQVRSC-----PRCPSLHTGIRSECRSPCSRPKKRECEILKIVLKCC- 417
QP Q +P V+ C P+ +++ GI ++C C + +++C + ++ ++ C
Sbjct: 167 QPIQQCQPQCQQQCVQQCAPTVAPQVINVNLGISAQCAPQCQQQCQQQCLLQQVPVQQCY 226
Query: 418 -ECV-TCVSVC 444
EC C + C
Sbjct: 227 QECTQPCQTTC 237
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 28.3 bits (60), Expect = 3.6
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Frame = +1
Query: 184 RGDQFIPGFCGVTCQR*LGTSGCRQPSCQWRPSPDPGQV---RSCPRCPSLHTGIRSECR 354
+GDQ IPG C G G P C W+P V R P G +E R
Sbjct: 566 KGDQGIPGL-DAPCPT--GPDGLPLPYCSWKPMDGKNDVWERRKRASLPGAQPGKGAETR 622
Query: 355 SP 360
P
Sbjct: 623 PP 624
>Z95559-17|CAL44975.1| 331|Caenorhabditis elegans Hypothetical
protein Y41E3.19 protein.
Length = 331
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +1
Query: 166 LLRAXLRGDQFIPGFCGVTCQR*LGTSGCRQPSCQWRPSPDPGQVRSCPRCPSL-HTGIR 342
LL R D ++ C + GT+GC C W ++ PR S+
Sbjct: 135 LLNTIGRCDHYLCTACYGLVKNSDGTNGCSSRQCFWNGENSETEICQRPRARSISEMSSN 194
Query: 343 SECRSPCS 366
S C CS
Sbjct: 195 SLCSEDCS 202
>Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical
protein F47A4.5 protein.
Length = 1071
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 313 RCPSLHTGIRSECRSPCSRPKKRECEILK 399
RCP + G RS CR CS + E L+
Sbjct: 679 RCPKGYKGCRSNCRHDCSSAEDEYEETLQ 707
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 275 DPRRILARFGAVPDVHHYIRVSVLNAD--HHVVVLKNGSVKY*KLC 406
DPRR ARF A+ D HH I S +NAD V L ++K + C
Sbjct: 1068 DPRR--ARF-ALTDFHHCIESSRVNADEIRKTVQLTENNIKKLENC 1110
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 275 DPRRILARFGAVPDVHHYIRVSVLNAD--HHVVVLKNGSVKY*KLC 406
DPRR ARF A+ D HH I S +NAD V L ++K + C
Sbjct: 1068 DPRR--ARF-ALTDFHHCIESSRVNADEIRKTVQLTENNIKKLENC 1110
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 275 DPRRILARFGAVPDVHHYIRVSVLNAD--HHVVVLKNGSVKY*KLC 406
DPRR ARF A+ D HH I S +NAD V L ++K + C
Sbjct: 651 DPRR--ARF-ALTDFHHCIESSRVNADEIRKTVQLTENNIKKLENC 693
>Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical
protein T22A3.3a protein.
Length = 398
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 256 QPSCQWRPSPDPGQVRSCPRCPSLHTGIRSE 348
QPS W S D G + S P +G+RS+
Sbjct: 119 QPSNFWESSQDSGVLSSLSSSPQQRSGLRSQ 149
>Z46381-10|CAE17898.2| 366|Caenorhabditis elegans Hypothetical
protein M01F1.9 protein.
Length = 366
Score = 27.1 bits (57), Expect = 8.2
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = -2
Query: 276 SPLTRWLPTTAGTKSSLTGNSTEPRDKLISSQXGP---QEYRFD---GRGYATMAGRGYL 115
+P +R PTT+ TKS+ T S+ P Q GP +++ D R RG+L
Sbjct: 62 TPSSRPRPTTSVTKSAATVYSSHPNILFCELQLGPGQTKQFVCDIPLSRNGIPPTFRGHL 121
Query: 114 TPQSNQV 94
SN++
Sbjct: 122 VKYSNRI 128
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 238 GTSGCRQPSCQWRPSPDPGQVRSCPRCPSLHTG 336
G+ G P P PGQ SC CP TG
Sbjct: 264 GSDGLPGPHGGTGPRGPPGQPGSCDHCPPPRTG 296
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 27.1 bits (57), Expect = 8.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 203 LGSVELPVNDDLVPAVVGNHLVNGD----PRRILARFGAVPDVHHYIRVSVLNA 352
LG +E N ++ +VGN + GD P RI F V +++ S L+A
Sbjct: 102 LGEIESYANRRVLKILVGNKVDKGDEREVPERIGRDFSDVNQFDYFLETSALDA 155
>AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown protein
protein.
Length = 318
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 256 QPSCQWRPSPDPGQVRSCPRCPSLHTGIRSE 348
QPS W S D G + S P +G+RS+
Sbjct: 39 QPSNFWESSQDSGVLSSLSSSPQQRSGLRSQ 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,383,103
Number of Sequences: 27780
Number of extensions: 297977
Number of successful extensions: 896
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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