Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5184
         (523 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060367-1|AAL25406.1|  299|Drosophila melanogaster LD22381p pro...    35   0.058
AF221109-1|AAF59840.1|  299|Drosophila melanogaster CHARYBDE pro...    35   0.058
AE014296-1956|AAF50060.2|  299|Drosophila melanogaster CG7533-PC...    35   0.058

>AY060367-1|AAL25406.1|  299|Drosophila melanogaster LD22381p
           protein.
          Length = 299

 Score = 35.1 bits (77), Expect = 0.058
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -2

Query: 483 QRALTPFAHYDPRPSPILTLWYFELPPLTIFFYLLYLTVR*PPAG 349
           +RA T F  ++  P+ +  + YF++ P T+  + LYLT+R   +G
Sbjct: 220 ERACTLFIEFESEPNKVKRIAYFKVDPDTVSIFELYLTLRQDKSG 264


>AF221109-1|AAF59840.1|  299|Drosophila melanogaster CHARYBDE
           protein.
          Length = 299

 Score = 35.1 bits (77), Expect = 0.058
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -2

Query: 483 QRALTPFAHYDPRPSPILTLWYFELPPLTIFFYLLYLTVR*PPAG 349
           +RA T F  ++  P+ +  + YF++ P T+  + LYLT+R   +G
Sbjct: 220 ERACTLFIEFESEPNKVKRIAYFKVDPDTVSIFELYLTLRQDKSG 264


>AE014296-1956|AAF50060.2|  299|Drosophila melanogaster CG7533-PC
           protein.
          Length = 299

 Score = 35.1 bits (77), Expect = 0.058
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -2

Query: 483 QRALTPFAHYDPRPSPILTLWYFELPPLTIFFYLLYLTVR*PPAG 349
           +RA T F  ++  P+ +  + YF++ P T+  + LYLT+R   +G
Sbjct: 220 ERACTLFIEFESEPNKVKRIAYFKVDPDTVSIFELYLTLRQDKSG 264


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,895,469
Number of Sequences: 53049
Number of extensions: 379037
Number of successful extensions: 597
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)