Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5184
(523 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 25 0.62
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 2.5
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 4.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 4.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 4.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 4.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 4.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 4.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 4.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 4.4
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.6 bits (51), Expect = 0.62
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 208 NFKFLNTKSNYKPITDNLMN 267
N+ + N +NYKP+ N++N
Sbjct: 321 NYNYNNYNNNYKPLYYNIIN 340
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.6 bits (46), Expect = 2.5
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 216 VFKYKIKLQTDYR*FNEQYCLFIFKDEIKYVFVVLDIKIQKQ 341
++K ++ +Y F+EQ C+ F Y +D+K KQ
Sbjct: 153 IYKSSCEINVEYFPFDEQSCIMKF-GSWTYNGAQVDLKHMKQ 193
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 208 NFKFLNTKSNYKPITDNL 261
N+ + N +NYKP+ N+
Sbjct: 88 NYNYNNYNNNYKPLYYNI 105
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 208 NFKFLNTKSNYKPITDNL 261
N+ + N +NYKP+ N+
Sbjct: 88 NYNYNNYNNNYKPLYYNI 105
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 208 NFKFLNTKSNYKPITDNL 261
N+ + N +NYKP+ N+
Sbjct: 88 NYNYNNYNNNYKPLYYNI 105
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 208 NFKFLNTKSNYKPITDNL 261
N+ + N +NYKP+ N+
Sbjct: 88 NYNYNNYNNNYKPLYYNI 105
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 208 NFKFLNTKSNYKPITDNL 261
N+ + N +NYKP+ N+
Sbjct: 321 NYNYNNYNNNYKPLYYNI 338
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 208 NFKFLNTKSNYKPITDNL 261
N+ + N +NYKP+ N+
Sbjct: 321 NYNYNNYNNNYKPLHYNI 338
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 208 NFKFLNTKSNYKPITDNL 261
N+ + N +NYKP+ N+
Sbjct: 321 NYNYNNYNNNYKPLYYNI 338
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 208 NFKFLNTKSNYKPITDNL 261
N+ + N +NYKP+ N+
Sbjct: 321 NYNYNNYNNNYKPLYYNI 338
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 208 NFKFLNTKSNYKPITDNL 261
N+ + N +NYKP+ N+
Sbjct: 310 NYNYNNYNNNYKPLYYNI 327
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,515
Number of Sequences: 438
Number of extensions: 2859
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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