Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5178
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    25   1.7  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   6.8  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   6.8  

>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = +1

Query: 403 RLPYPSNRNSSLLHDRNRRGGDTYPCGSQEALPPLKKLEG 522
           R PYP   +SS +      G    PC      P + +L G
Sbjct: 504 RRPYPFILDSSFVCSTTNHGDQERPCDGDAGAPVVVELPG 543


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 428 THHCFTTEIGGAVIPTRAGHKRPYHH*KN 514
           +H C + E GG ++  + G   P  H K+
Sbjct: 117 SHGCMSPEQGGGLLQCKVGTVSPQLHGKS 145


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 262 KVYSRYESVTRFLFECAKSLNL 197
           +V  RYE++ R   EC++ LNL
Sbjct: 346 QVRPRYEAMRRKEEECSRELNL 367


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,070
Number of Sequences: 2352
Number of extensions: 12406
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)