Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5176
         (496 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   3.3  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   3.3  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   3.3  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 414 RYNRDSCRIAVSFAFAPHRWTL 479
           RY       A SF F PH+W L
Sbjct: 291 RYLMKGIETADSFNFNPHKWML 312


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 414 RYNRDSCRIAVSFAFAPHRWTL 479
           RY       A SF F PH+W L
Sbjct: 322 RYLMKGIETADSFNFNPHKWML 343


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 24  KCAVKMRPLMPTVAPTHCT 80
           +C VK++ ++ T+ PTH T
Sbjct: 364 QCPVKLKSIIETLFPTHPT 382


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,171
Number of Sequences: 2352
Number of extensions: 7818
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)