Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5176
         (496 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028366-1|AAH28366.1|  698|Homo sapiens testis specific, 10 pro...    31   2.2  
AY014284-1|AAK27309.1|  699|Homo sapiens nucleoporin NYD-SP7 pro...    31   2.2  
AF254756-1|AAK13079.1|  698|Homo sapiens predicted testis protei...    31   2.2  
AC019097-1|AAY14820.1|  698|Homo sapiens unknown protein.              31   2.2  

>BC028366-1|AAH28366.1|  698|Homo sapiens testis specific, 10
           protein.
          Length = 698

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 26  VRRQNASSNAYRCAHTLHPHHRC 94
           +RRQN SSNAY  + T+ P+ +C
Sbjct: 648 LRRQNYSSNAYHMSSTMKPNTKC 670


>AY014284-1|AAK27309.1|  699|Homo sapiens nucleoporin NYD-SP7
           protein.
          Length = 699

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 26  VRRQNASSNAYRCAHTLHPHHRC 94
           +RRQN SSNAY  + T+ P+ +C
Sbjct: 649 LRRQNYSSNAYHMSSTMKPNTKC 671


>AF254756-1|AAK13079.1|  698|Homo sapiens predicted testis protein
           protein.
          Length = 698

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 26  VRRQNASSNAYRCAHTLHPHHRC 94
           +RRQN SSNAY  + T+ P+ +C
Sbjct: 648 LRRQNYSSNAYHMSSTMKPNTKC 670


>AC019097-1|AAY14820.1|  698|Homo sapiens unknown protein.
          Length = 698

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 26  VRRQNASSNAYRCAHTLHPHHRC 94
           +RRQN SSNAY  + T+ P+ +C
Sbjct: 648 LRRQNYSSNAYHMSSTMKPNTKC 670


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,796,360
Number of Sequences: 237096
Number of extensions: 996232
Number of successful extensions: 2038
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2038
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)