Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5176
         (496 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121626-1|AAM51953.1|  605|Drosophila melanogaster GH20068p pro...    29   3.5  
AE013599-2758|AAF57644.2|  605|Drosophila melanogaster CG33147-P...    29   3.5  
AY748349-1|AAU89434.1| 1386|Drosophila melanogaster uncoordinate...    28   8.0  
AY118608-1|AAM49977.1| 1228|Drosophila melanogaster LP08350p pro...    28   8.0  
AE014298-3088|AAF50849.3| 1386|Drosophila melanogaster CG1501-PA...    28   8.0  

>AY121626-1|AAM51953.1|  605|Drosophila melanogaster GH20068p
           protein.
          Length = 605

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 39  MRPLMPTVAPTHCTHTIGVS-PLLPVLYL 122
           MRP  P  +PT C   +GVS P L V++L
Sbjct: 114 MRPAGPDTSPTDCILVVGVSRPKLAVVFL 142


>AE013599-2758|AAF57644.2|  605|Drosophila melanogaster CG33147-PA
           protein.
          Length = 605

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 39  MRPLMPTVAPTHCTHTIGVS-PLLPVLYL 122
           MRP  P  +PT C   +GVS P L V++L
Sbjct: 114 MRPAGPDTSPTDCILVVGVSRPKLAVVFL 142


>AY748349-1|AAU89434.1| 1386|Drosophila melanogaster uncoordinated
            protein.
          Length = 1386

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +1

Query: 25   SAPSKCVL*CLPLRPHTAPT 84
            S P  C    LP RPHTAPT
Sbjct: 1297 SEPGLCAHLVLPKRPHTAPT 1316


>AY118608-1|AAM49977.1| 1228|Drosophila melanogaster LP08350p protein.
          Length = 1228

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +1

Query: 25   SAPSKCVL*CLPLRPHTAPT 84
            S P  C    LP RPHTAPT
Sbjct: 1139 SEPGLCAHLVLPKRPHTAPT 1158


>AE014298-3088|AAF50849.3| 1386|Drosophila melanogaster CG1501-PA
            protein.
          Length = 1386

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +1

Query: 25   SAPSKCVL*CLPLRPHTAPT 84
            S P  C    LP RPHTAPT
Sbjct: 1297 SEPGLCAHLVLPKRPHTAPT 1316


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,406,462
Number of Sequences: 53049
Number of extensions: 306947
Number of successful extensions: 700
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)